| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349898
Identifier: 29349898
GI number: 29349898
Start: 5907291
End: 5907863
Strand: Reverse
Name: 29349898
Synonym: BT_4490
Alternate gene names: NA
Gene position: 5907863-5907291 (Counterclockwise)
Preceding gene: 29349899
Following gene: 29349897
Centisome position: 94.37
GC content: 34.38
Gene sequence:
>573_bases ATGAAACTAAACATTTATTTAATCGGAGCATTCTTCGGAATGCTTATTCTAGCATCATGCGGCAACGATGATGATGAAAC TCCCGTTCCTAAAGATGATTCATGGTATTGGGGATACTTTAAAGGGGAGATAAACGGAAAGGAAATATCTCTGGAAAATG AAGCTCATACTGATTGGTCTGTTCATTCAGTAAAAACAAGTGCATCTCCTCCTAATAACGATACCGATTCTATAAGGGGA ATGATGACAAGCATAAAGTACGGTGAGGATGAATTACTTAGCATAACCATCTATCATTTACATAAAGGAATACGTTATAT AACAAAATCAACAAAAACAGATTGGATATATGATGGAATTCAAATAACACGTGATACACATAGTGATAAATATGAGGACA AATATATTTACTATATCCCCCAAAAAGAGAAACCATTCCAAGTAGAAATTACTAAATCTGCCTATGCAGACCAATGGCAT CCTATTATTGAAGGAAATCTTAACGGAGTGCTTTATCGTTCAGATAACCCTAAAGATTCTATTATAATCAATGGTTCATA CGGAACCAGATAA
Upstream 100 bases:
>100_bases TCCAAATGGTTATCCTTATACAGTAAAGATTATCTCTCCCATAATGGATATAACAGGAGATATTATAGAAGAAGAAAGCG AATAAAACAATAAAAATAAG
Downstream 100 bases:
>100_bases TTTTTATCTATTACTAACTTTTATAAAAACATGTATTATGAAAAAGATTTTATTAATGCTCGCAAGTGCTTTTTTCATGT TTTCGTGTTCTCAAGAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKLNIYLIGAFFGMLILASCGNDDDETPVPKDDSWYWGYFKGEINGKEISLENEAHTDWSVHSVKTSASPPNNDTDSIRG MMTSIKYGEDELLSITIYHLHKGIRYITKSTKTDWIYDGIQITRDTHSDKYEDKYIYYIPQKEKPFQVEITKSAYADQWH PIIEGNLNGVLYRSDNPKDSIIINGSYGTR
Sequences:
>Translated_190_residues MKLNIYLIGAFFGMLILASCGNDDDETPVPKDDSWYWGYFKGEINGKEISLENEAHTDWSVHSVKTSASPPNNDTDSIRG MMTSIKYGEDELLSITIYHLHKGIRYITKSTKTDWIYDGIQITRDTHSDKYEDKYIYYIPQKEKPFQVEITKSAYADQWH PIIEGNLNGVLYRSDNPKDSIIINGSYGTR >Mature_190_residues MKLNIYLIGAFFGMLILASCGNDDDETPVPKDDSWYWGYFKGEINGKEISLENEAHTDWSVHSVKTSASPPNNDTDSIRG MMTSIKYGEDELLSITIYHLHKGIRYITKSTKTDWIYDGIQITRDTHSDKYEDKYIYYIPQKEKPFQVEITKSAYADQWH PIIEGNLNGVLYRSDNPKDSIIINGSYGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21834; Mature: 21834
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNIYLIGAFFGMLILASCGNDDDETPVPKDDSWYWGYFKGEINGKEISLENEAHTDWS CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCEE VHSVKTSASPPNNDTDSIRGMMTSIKYGEDELLSITIYHLHKGIRYITKSTKTDWIYDGI EEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEHHHCCHHEECCCCCCCEEECCE QITRDTHSDKYEDKYIYYIPQKEKPFQVEITKSAYADQWHPIIEGNLNGVLYRSDNPKDS EEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEECCCCEEEEECCCCCCE IIINGSYGTR EEEECCCCCC >Mature Secondary Structure MKLNIYLIGAFFGMLILASCGNDDDETPVPKDDSWYWGYFKGEINGKEISLENEAHTDWS CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCEE VHSVKTSASPPNNDTDSIRGMMTSIKYGEDELLSITIYHLHKGIRYITKSTKTDWIYDGI EEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEHHHCCHHEECCCCCCCEEECCE QITRDTHSDKYEDKYIYYIPQKEKPFQVEITKSAYADQWHPIIEGNLNGVLYRSDNPKDS EEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEECCCCEEEEECCCCCCE IIINGSYGTR EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA