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The map label for this gene is 29349825

Identifier: 29349825

GI number: 29349825

Start: 5820481

End: 5822016

Strand: Reverse

Name: 29349825

Synonym: BT_4417

Alternate gene names: NA

Gene position: 5822016-5820481 (Counterclockwise)

Preceding gene: 29349826

Following gene: 29349824

Centisome position: 93.0

GC content: 47.98

Gene sequence:

>1536_bases
ATGATAGCAATAATAGCAACAGCAATTGCTTGCTTCGTCGTAGGAGGAATCCTTTCATACGTACTGTTCCGGTACGTGTT
GAAGTCCAAGTACGACAGTGTCCTGAAAGATGCGGAGACAGAAGCTGAAGTAATTAAGAAAAACAAATTGCTGGAAGTAA
AGGAAAAATTCCTGAACAAGAAAGCTGATTTGGAGAAGGAAGTGGCACTGCGTAATCAAAAGATTCAGCAGGCGGAAAAT
AAACTGAAACAACGTGAAATGGTGCTCAGCCAGCGTCAGGAAGAAATCCAACGCAAAAAGCTGGAAGCCGAAGCCGTAAA
GGAAAACCTGGAGGCGCAACTTGTTATCGTTGACAAAAAGAAGGAAGAACTGGACAAACTGCAACATCAGGAAATAGAAA
AACTGGAAGCAATCTCCGGTCTGTCTGCCGACGAAGCAAAAGAACGTCTGGTCGAATCACTGAAAGAAGAAGCTAAAACG
CAGGCACAGTCGTTTATCAACGACATCATGGATGATGCCAAACTGACTGCCAGCAAAGAAGCTAAACGGATCGTTATCCA
GTCTATCCAACGGGTAGCTACCGAAACTGCCATCGAAAACTCCGTAACGGTATTCCATATCGAATCGGACGAAATCAAAG
GACGTATCATCGGACGTGAAGGACGCAATATCCGTGCACTGGAAGCCGCTACCGGCGTTGAAATCGTTGTAGACGACACT
CCGGAAGCAATCGTTCTTTCCGCTTTTGACCCGGTTCGCCGTGAAATTGCCCGTCTGGCTCTTCACCAACTGGTGACAGA
CGGACGTATCCATCCGGCACGTATCGAGGAAGTGGTGTCCAAAGTACGCAAACAGGTAGAGGAAGAAATTATCGAAACCG
GTAAACGGACAACAATCGACCTTGGTATCCACGGTCTGCATCCGGAACTGATCCGTATCATCGGTAAGATGAAATATCGC
TCTTCTTATGGTCAGAACTTGTTGCAACACGCCCGTGAAACAGCCAATCTCTGTGCTGTGATGGCATCGGAACTGGGACT
GAACCCGAAGAAGGCAAAACGTGCAGGTTTGCTGCATGATATCGGTAAAGTGCCCGATGAAGAACCGGAATTGCCGCACG
CATTGCTGGGTATGAAACTTGCCGAGAAATACAAAGAAAAACCGGATATCTGCAACGCTATCGGTGCTCACCACGACGAA
ACGGAAATGACCAGTCTGCTGGCTCCTATCGTACAGGTTTGTGATGCTATCTCCGGTGCACGTCCGGGCGCACGCCGTGA
AATCGTAGAGGCTTACATCAAACGCCTGAACGATCTTGAACAATTGGCTATGGCTTATCCGGGTGTGACCAAGACATACG
CTATTCAGGCAGGACGCGAACTCCGCGTGATCGTAGGTGCCGATAAGATCGATGACAAGCAAACTGAAAGCTTGTCCGGT
GAAATCGCCAAGAAGATTCAGGACGAGATGACTTATCCGGGACAGGTGAAGATTACCGTTATCCGTGAAACACGTGCGGT
CAGCTTCGCTAAATAA

Upstream 100 bases:

>100_bases
ACTGATAAAGAAAACACCACGCACTGCACAATATCCGAGCAAATGTATGCTCTGATATTTGGCGGTGCGTTTTTATTTAT
ATAACTAAATTAATGTAAGA

Downstream 100 bases:

>100_bases
GTAAATATTCAAAAGAAGATTCAATACAAGGGCGAAGCAATTCGCCCTTTTTCAATTTATCATCATTCACTTCTCATGTT
TGCAGCATCACGCAGCAGCA

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MIAIIATAIACFVVGGILSYVLFRYVLKSKYDSVLKDAETEAEVIKKNKLLEVKEKFLNKKADLEKEVALRNQKIQQAEN
KLKQREMVLSQRQEEIQRKKLEAEAVKENLEAQLVIVDKKKEELDKLQHQEIEKLEAISGLSADEAKERLVESLKEEAKT
QAQSFINDIMDDAKLTASKEAKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVSKVRKQVEEEIIETGKRTTIDLGIHGLHPELIRIIGKMKYR
SSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHDIGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDE
TEMTSLLAPIVQVCDAISGARPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK

Sequences:

>Translated_511_residues
MIAIIATAIACFVVGGILSYVLFRYVLKSKYDSVLKDAETEAEVIKKNKLLEVKEKFLNKKADLEKEVALRNQKIQQAEN
KLKQREMVLSQRQEEIQRKKLEAEAVKENLEAQLVIVDKKKEELDKLQHQEIEKLEAISGLSADEAKERLVESLKEEAKT
QAQSFINDIMDDAKLTASKEAKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVSKVRKQVEEEIIETGKRTTIDLGIHGLHPELIRIIGKMKYR
SSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHDIGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDE
TEMTSLLAPIVQVCDAISGARPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
>Mature_511_residues
MIAIIATAIACFVVGGILSYVLFRYVLKSKYDSVLKDAETEAEVIKKNKLLEVKEKFLNKKADLEKEVALRNQKIQQAEN
KLKQREMVLSQRQEEIQRKKLEAEAVKENLEAQLVIVDKKKEELDKLQHQEIEKLEAISGLSADEAKERLVESLKEEAKT
QAQSFINDIMDDAKLTASKEAKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVSKVRKQVEEEIIETGKRTTIDLGIHGLHPELIRIIGKMKYR
SSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHDIGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDE
TEMTSLLAPIVQVCDAISGARPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA [H]

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1 [H]

EC number: =3.1.4.16 [H]

Molecular weight: Translated: 57200; Mature: 57200

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAIIATAIACFVVGGILSYVLFRYVLKSKYDSVLKDAETEAEVIKKNKLLEVKEKFLNK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCH
KADLEKEVALRNQKIQQAENKLKQREMVLSQRQEEIQRKKLEAEAVKENLEAQLVIVDKK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
KEELDKLQHQEIEKLEAISGLSADEAKERLVESLKEEAKTQAQSFINDIMDDAKLTASKE
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCCEEEEECCCCCEEEECCC
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVSKVRKQVEEEIIETGKRTTID
CCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
HHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
RPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHH
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
HHHHHHHHHCCCCCCEEEEEEECCCHHCCCC
>Mature Secondary Structure
MIAIIATAIACFVVGGILSYVLFRYVLKSKYDSVLKDAETEAEVIKKNKLLEVKEKFLNK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCH
KADLEKEVALRNQKIQQAENKLKQREMVLSQRQEEIQRKKLEAEAVKENLEAQLVIVDKK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
KEELDKLQHQEIEKLEAISGLSADEAKERLVESLKEEAKTQAQSFINDIMDDAKLTASKE
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCCEEEEECCCCCEEEECCC
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVSKVRKQVEEEIIETGKRTTID
CCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
HHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
RPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHH
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
HHHHHHHHHCCCCCCEEEEEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA