| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is yaaT [H]
Identifier: 29349227
GI number: 29349227
Start: 4970594
End: 4972189
Strand: Reverse
Name: yaaT [H]
Synonym: BT_3819
Alternate gene names: 29349227
Gene position: 4972189-4970594 (Counterclockwise)
Preceding gene: 29349228
Following gene: 29349226
Centisome position: 79.42
GC content: 48.12
Gene sequence:
>1596_bases ATGGAATATAAGCTTCATAATGGGAGCGGCGGTCTTTGCTGCAAAGGATGCTCCCGACAAGATAAGAAACTGAACACTTA CGATTGGCTGGCAGACATACCAGGCAACGCGGAAGAGTGTGATATGGTGGAAGTGCAATTTAAAAACACCCGAAAAGGCT ATTACCGCAACAGCAATAAGATCAAACTGGAAAAGGGAGACATCGTTGCCGTAGAAGCTGCTCCGGGCCATGACATCGGC GTCGTGACCCTGACGGGAAGACTCGTCCCGCTGCAAATGAAGAAGGCCAACTTCAAGACTGATGTTGAAATAAAGAGAAT CTACCGGAAAGCAAAACCGGTGGATATGGAGAAATTCAACGAAGCGAAAGCAAAGGAACATGCGACCATGATCCGTGCCC GCCAGATCGCACTGAACCTGAACCTGGATATGAAAATCGGTGATGTGGAATATCAGGGCGACGGCAATAAGGCCATCTTC TACTACATTGCTGACGAACGTGTGGACTTCCGCCAACTGATTAAGGTACTTGCCGAAGCTTTCCGTGTCCGTATTGAAAT GAAACAAATCGGTGCACGACAGGAAGCAGGACGTATCGGAGGTATCGGTCCTTGCGGACGGGAGCTTTGCTGCGCTACTT GGATGACGAGCTTTGTATCGGTATCTACAAGTGCCGCCCGCTTTCAGGACATTTCACTGAATCCTCAAAAGCTTGCCGGA CAGTGCGCAAAGTTAAAGTGTTGTCTCAACTATGAGGTGGACTGCTATGTGGAAGCTCAGAAGCGCCTCCCTTCCAAAGA AATCGAACTGGAAACAAAGGACGGCACTTTCTACTTCTTCAAGGCTGATATTCTGAGTAATCATGTTTCTTACTCTACGG ACAAGAACTTCCCCGCCAATCTGGTAACAATCAGTGGAAAACGTGCCTTTGAGGTAATTGCCATGAACAAGAAAGGAATG AAACCGGATAGTCTGCTCGAAGCTGAAGTGAAGCAAGAATCCAAAAAGCCGATTGACTTGCTGGAACAGGAAAGCCTCAC CCGCTTCGACCGTAACCGAAATAATAAGGACGGAAACAACGGTAACCGGAACAAGAAGAAGAGAAAAGGAAATAATGACA ACCGCCCGCAGGCACAGGCCGAAAGTGGAAATCGTCCGCAGCAACCTCAGAGGGGGGAGAACGAGAATCGTCCCCAACCG TCAGAGAACGGCAACAGAGGAGAAAGAGGAGACAGAGAAAATCGTCCGAGAAACAATAACAATAATAACCGGAACAGAGG ACAGAATCAAGGACGGAATAATGAGAACAGACGTCCGGAAAGAGGACAGAATCAGGAACGTCCACAGAATCCGAACCGTC CGCAGAATCAAGAGCGTTCACAAAATCAAGAGCGTCCGGTAAATCAGGAACGCAATCAAGAACGTAATCAAGAGCGTCCG CAGAATAGAGAACGGCAACCCAAACAGGAACGTCCTCAAAATCAGGAACGCCCGCAGGAACAAGGAAGACAACCCAACCA GGAACGTATTCCCAGACCTGAAAGAAATTCGAATCAAGAGAAACCGCAAAATAATGAAAAGCCTGCTCAGGAATAG
Upstream 100 bases:
>100_bases CGCAACTGCATATAGAACAAAATGTAAATGCCAAGATGGTATTTTTCGACTTCTCTCTGAAGATGATCGTACTGTTGAAG CAATAATAAATATATAAACT
Downstream 100 bases:
>100_bases CTTATTTTGTTTATTCGGTGCCTGCCTCATGGCAGCCTGTAATGAAAATACCGTGTATCACTCCTACCAGTCCCTGCCCA ATGAGGGATGGGGAAAGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MEYKLHNGSGGLCCKGCSRQDKKLNTYDWLADIPGNAEECDMVEVQFKNTRKGYYRNSNKIKLEKGDIVAVEAAPGHDIG VVTLTGRLVPLQMKKANFKTDVEIKRIYRKAKPVDMEKFNEAKAKEHATMIRARQIALNLNLDMKIGDVEYQGDGNKAIF YYIADERVDFRQLIKVLAEAFRVRIEMKQIGARQEAGRIGGIGPCGRELCCATWMTSFVSVSTSAARFQDISLNPQKLAG QCAKLKCCLNYEVDCYVEAQKRLPSKEIELETKDGTFYFFKADILSNHVSYSTDKNFPANLVTISGKRAFEVIAMNKKGM KPDSLLEAEVKQESKKPIDLLEQESLTRFDRNRNNKDGNNGNRNKKKRKGNNDNRPQAQAESGNRPQQPQRGENENRPQP SENGNRGERGDRENRPRNNNNNNRNRGQNQGRNNENRRPERGQNQERPQNPNRPQNQERSQNQERPVNQERNQERNQERP QNRERQPKQERPQNQERPQEQGRQPNQERIPRPERNSNQEKPQNNEKPAQE
Sequences:
>Translated_531_residues MEYKLHNGSGGLCCKGCSRQDKKLNTYDWLADIPGNAEECDMVEVQFKNTRKGYYRNSNKIKLEKGDIVAVEAAPGHDIG VVTLTGRLVPLQMKKANFKTDVEIKRIYRKAKPVDMEKFNEAKAKEHATMIRARQIALNLNLDMKIGDVEYQGDGNKAIF YYIADERVDFRQLIKVLAEAFRVRIEMKQIGARQEAGRIGGIGPCGRELCCATWMTSFVSVSTSAARFQDISLNPQKLAG QCAKLKCCLNYEVDCYVEAQKRLPSKEIELETKDGTFYFFKADILSNHVSYSTDKNFPANLVTISGKRAFEVIAMNKKGM KPDSLLEAEVKQESKKPIDLLEQESLTRFDRNRNNKDGNNGNRNKKKRKGNNDNRPQAQAESGNRPQQPQRGENENRPQP SENGNRGERGDRENRPRNNNNNNRNRGQNQGRNNENRRPERGQNQERPQNPNRPQNQERSQNQERPVNQERNQERNQERP QNRERQPKQERPQNQERPQEQGRQPNQERIPRPERNSNQEKPQNNEKPAQE >Mature_531_residues MEYKLHNGSGGLCCKGCSRQDKKLNTYDWLADIPGNAEECDMVEVQFKNTRKGYYRNSNKIKLEKGDIVAVEAAPGHDIG VVTLTGRLVPLQMKKANFKTDVEIKRIYRKAKPVDMEKFNEAKAKEHATMIRARQIALNLNLDMKIGDVEYQGDGNKAIF YYIADERVDFRQLIKVLAEAFRVRIEMKQIGARQEAGRIGGIGPCGRELCCATWMTSFVSVSTSAARFQDISLNPQKLAG QCAKLKCCLNYEVDCYVEAQKRLPSKEIELETKDGTFYFFKADILSNHVSYSTDKNFPANLVTISGKRAFEVIAMNKKGM KPDSLLEAEVKQESKKPIDLLEQESLTRFDRNRNNKDGNNGNRNKKKRKGNNDNRPQAQAESGNRPQQPQRGENENRPQP SENGNRGERGDRENRPRNNNNNNRNRGQNQGRNNENRRPERGQNQERPQNPNRPQNQERSQNQERPVNQERNQERNQERP QNRERQPKQERPQNQERPQEQGRQPNQERIPRPERNSNQEKPQNNEKPAQE
Specific function: Essential for the phosphorelay during initiation of sporulation. May control the level of phosphorylated spo0A through spo0E activity during sporulation [H]
COG id: COG1774
COG function: function code S; Uncharacterized homolog of PSP1
Gene ontology:
Cell location: Cytoplasm. Note=In the vegetative phase, localized throughout the periphery of the cell and the division septum. In the sporulation stages, fluorescence of the yaaT-GFP fusion protein was observed as two dots at the sides of an asymmetric septum and at th
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PSP1 C-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007557 [H]
Pfam domain/function: PF04468 PSP1 [H]
EC number: NA
Molecular weight: Translated: 61219; Mature: 61219
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYKLHNGSGGLCCKGCSRQDKKLNTYDWLADIPGNAEECDMVEVQFKNTRKGYYRNSNK CCEEEECCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCE IKLEKGDIVAVEAAPGHDIGVVTLTGRLVPLQMKKANFKTDVEIKRIYRKAKPVDMEKFN EEEECCCEEEEECCCCCCEEEEEEECEEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHH EAKAKEHATMIRARQIALNLNLDMKIGDVEYQGDGNKAIFYYIADERVDFRQLIKVLAEA HHHHHHHHHHHHHEEEEEEECEEEEECCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHH FRVRIEMKQIGARQEAGRIGGIGPCGRELCCATWMTSFVSVSTSAARFQDISLNPQKLAG HHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHEEECCCCHHHHHH QCAKLKCCLNYEVDCYVEAQKRLPSKEIELETKDGTFYFFKADILSNHVSYSTDKNFPAN HHHEEEEEECCCEEEEEEHHHCCCCCCEEEEECCCEEEEEEHHHHHCCCCCCCCCCCCCE LVTISGKRAFEVIAMNKKGMKPDSLLEAEVKQESKKPIDLLEQESLTRFDRNRNNKDGNN EEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC GNRNKKKRKGNNDNRPQAQAESGNRPQQPQRGENENRPQPSENGNRGERGDRENRPRNNN CCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NNNRNRGQNQGRNNENRRPERGQNQERPQNPNRPQNQERSQNQERPVNQERNQERNQERP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCC QNRERQPKQERPQNQERPQEQGRQPNQERIPRPERNSNQEKPQNNEKPAQE HHHHCCCHHHCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEYKLHNGSGGLCCKGCSRQDKKLNTYDWLADIPGNAEECDMVEVQFKNTRKGYYRNSNK CCEEEECCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCE IKLEKGDIVAVEAAPGHDIGVVTLTGRLVPLQMKKANFKTDVEIKRIYRKAKPVDMEKFN EEEECCCEEEEECCCCCCEEEEEEECEEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHH EAKAKEHATMIRARQIALNLNLDMKIGDVEYQGDGNKAIFYYIADERVDFRQLIKVLAEA HHHHHHHHHHHHHEEEEEEECEEEEECCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHH FRVRIEMKQIGARQEAGRIGGIGPCGRELCCATWMTSFVSVSTSAARFQDISLNPQKLAG HHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHEEECCCCHHHHHH QCAKLKCCLNYEVDCYVEAQKRLPSKEIELETKDGTFYFFKADILSNHVSYSTDKNFPAN HHHEEEEEECCCEEEEEEHHHCCCCCCEEEEECCCEEEEEEHHHHHCCCCCCCCCCCCCE LVTISGKRAFEVIAMNKKGMKPDSLLEAEVKQESKKPIDLLEQESLTRFDRNRNNKDGNN EEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC GNRNKKKRKGNNDNRPQAQAESGNRPQQPQRGENENRPQPSENGNRGERGDRENRPRNNN CCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NNNRNRGQNQGRNNENRRPERGQNQERPQNPNRPQNQERSQNQERPVNQERNQERNQERP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCC QNRERQPKQERPQNQERPQEQGRQPNQERIPRPERNSNQEKPQNNEKPAQE HHHHCCCHHHCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]