Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349097

Identifier: 29349097

GI number: 29349097

Start: 4793054

End: 4793971

Strand: Reverse

Name: 29349097

Synonym: BT_3689

Alternate gene names: NA

Gene position: 4793971-4793054 (Counterclockwise)

Preceding gene: 29349098

Following gene: 29349096

Centisome position: 76.58

GC content: 43.25

Gene sequence:

>918_bases
ATGATTCCATTTAAAGACATTACACTAGCTGATAGAGACACAATAACTGCATTCACCATGAAAAGTGACCGCCGAAACTG
CGATCTTTCATTTTCCAACCTCTGTAGCTGGAGATTCTTGTACGATACTCAATTTGCAGTCATCGACGATTTTCTGGTAT
TCAAATTTTGGGCCGGCGAACAACTGGCATATATGATGCCTGTAGGAAACGGCGATCTGAAAGCTGTATTACGGAAATTA
ATCGAAGATGCGGATAAGGAGAAGCATAATTTCTGTATGTTGGGAGTTTGCAGCAATATGCGCGCCGACCTCGAAGCGAT
TTTACCCGAACGGTTCATTTTCACGGAAGACCGTGCCTATGCCGACTATATATATTTAAGGAGTGATCTGGCTACCTTAA
AAGGAAAGAAATTTCAGGCAAAGAGAAATCATATCAACCGGTTCCGTAATACGTATCCCGATTACGAATATACACCGATT
ACGCCCGACCGTATTCAAGAATGTCTGGACCTGGAAGCCGAATGGTGCAAAGTGAACAACTGCGACCAGCAGGAAGGAAC
GGGAAATGAACGTCGTGCCCTCATTTATGCATTACATAATTTCGAAGCACTCGGTCTGACCGGAGGCATTCTCCACGTCA
ACGGGAAAATTGTAGCATTTACTTTCGGGATGCCTATCAACCATGAAACATTCGGGGTACATGTAGAAAAGGCAGATACC
AGCATTGACGGTGCTTACGCCATGATTAATTACGAGTTTGCCAATCGCATTCCCGAACAGTATATCTATATCAACCGGGA
AGAAGATTTAGGTATTGAAGGCTTACGCAAAGCAAAGCTGTCTTATCAACCGGTAACTATTCTCGAAAAGTATATGGCTT
GTCTGAAAGACCATCCTATGGATATGGTCAGATGGTAA

Upstream 100 bases:

>100_bases
GCATTACTGACACCGACTATCCTGCGATTATTAGGTGTTTTGTAAAAACAAAATTCTTTCATTTTCCGTTATATAAAGAG
TTAAACGCAAAAAGCATTTT

Downstream 100 bases:

>100_bases
TAATATATAAGGTATGACGACAAAAGAAAAGGTTAAGGCATTATGGCAGTTATGTTTCGACGACAATGAAGAGTTCGTTG
AAATGTACTTTAGGCTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MIPFKDITLADRDTITAFTMKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGEQLAYMMPVGNGDLKAVLRKL
IEDADKEKHNFCMLGVCSNMRADLEAILPERFIFTEDRAYADYIYLRSDLATLKGKKFQAKRNHINRFRNTYPDYEYTPI
TPDRIQECLDLEAEWCKVNNCDQQEGTGNERRALIYALHNFEALGLTGGILHVNGKIVAFTFGMPINHETFGVHVEKADT
SIDGAYAMINYEFANRIPEQYIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLKDHPMDMVRW

Sequences:

>Translated_305_residues
MIPFKDITLADRDTITAFTMKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGEQLAYMMPVGNGDLKAVLRKL
IEDADKEKHNFCMLGVCSNMRADLEAILPERFIFTEDRAYADYIYLRSDLATLKGKKFQAKRNHINRFRNTYPDYEYTPI
TPDRIQECLDLEAEWCKVNNCDQQEGTGNERRALIYALHNFEALGLTGGILHVNGKIVAFTFGMPINHETFGVHVEKADT
SIDGAYAMINYEFANRIPEQYIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLKDHPMDMVRW
>Mature_305_residues
MIPFKDITLADRDTITAFTMKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGEQLAYMMPVGNGDLKAVLRKL
IEDADKEKHNFCMLGVCSNMRADLEAILPERFIFTEDRAYADYIYLRSDLATLKGKKFQAKRNHINRFRNTYPDYEYTPI
TPDRIQECLDLEAEWCKVNNCDQQEGTGNERRALIYALHNFEALGLTGGILHVNGKIVAFTFGMPINHETFGVHVEKADT
SIDGAYAMINYEFANRIPEQYIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLKDHPMDMVRW

Specific function: Unknown

COG id: COG4866

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35440; Mature: 35440

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFKDITLADRDTITAFTMKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGE
CCCCCCCEECCCCEEEEEEECCCCCCCCCCHHHHEEEEEEECCHHHHHHHHHEEEEECCC
QLAYMMPVGNGDLKAVLRKLIEDADKEKHNFCMLGVCSNMRADLEAILPERFIFTEDRAY
CEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCEEEECCCCC
ADYIYLRSDLATLKGKKFQAKRNHINRFRNTYPDYEYTPITPDRIQECLDLEAEWCKVNN
EEEEEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEECCC
CDQQEGTGNERRALIYALHNFEALGLTGGILHVNGKIVAFTFGMPINHETFGVHVEKADT
CCCCCCCCCCCEEEEEEEECCEEECCCCCEEEECCEEEEEEECCCCCCCEEEEEEEECCC
SIDGAYAMINYEFANRIPEQYIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLKDHPM
CCCCEEEEEEEHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCH
DMVRW
HHHCC
>Mature Secondary Structure
MIPFKDITLADRDTITAFTMKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGE
CCCCCCCEECCCCEEEEEEECCCCCCCCCCHHHHEEEEEEECCHHHHHHHHHEEEEECCC
QLAYMMPVGNGDLKAVLRKLIEDADKEKHNFCMLGVCSNMRADLEAILPERFIFTEDRAY
CEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCEEEECCCCC
ADYIYLRSDLATLKGKKFQAKRNHINRFRNTYPDYEYTPITPDRIQECLDLEAEWCKVNN
EEEEEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEECCC
CDQQEGTGNERRALIYALHNFEALGLTGGILHVNGKIVAFTFGMPINHETFGVHVEKADT
CCCCCCCCCCCEEEEEEEECCEEECCCCCEEEECCEEEEEEECCCCCCCEEEEEEEECCC
SIDGAYAMINYEFANRIPEQYIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLKDHPM
CCCCEEEEEEEHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCH
DMVRW
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA