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The map label for this gene is yohK [H]

Identifier: 29349098

GI number: 29349098

Start: 4794027

End: 4794722

Strand: Reverse

Name: yohK [H]

Synonym: BT_3690

Alternate gene names: 29349098

Gene position: 4794722-4794027 (Counterclockwise)

Preceding gene: 29349099

Following gene: 29349097

Centisome position: 76.59

GC content: 47.7

Gene sequence:

>696_bases
ATGAGCTTTTTAGAAAATAATTTCTTTCTGCTGGCTGTCACTTTCGGCGTTTTCTTCTTTGCCAAATTGCTTCAGAAGAA
AACGGGGCTGGTACTGCTGAACCCGATCTTACTCACCATTGCCGTTCTGATTATCTTCCTTAAAATGGCCAATATCTCTT
ACGAGACTTACAATCAGGGAGGGCATCTCATCGAATTCTGGTTACGCCCGGCTGTGGTAGCTTTGGGAGTCCCTTTATAT
CTTCAGCTGGAAATGATTAAGAAACAGTTGCTGCCTATCCTCTTGTCTCAACTGGCAGGGTGCATCGTCGGAGTGATCTC
TGTGGTATTAATCGCCAAGTTTATGGGAGCTTCACAAGAAGTCATTCTTTCATTGGCACCTAAATCCGTAACGACTCCGA
TTGCCATGGAAGTGACCAAGGCTATCGGAGGTATCCCGTCACTGACGGCAGCCGTTGTAGTAGCGGTAGGTTTACTGGGA
GCCATCTGCGGATTTAAGACAATGAAAATCATGCACGTAGGCAGTCCGATAGCCCAAGGGCTTTCGATGGGAACAGCCGC
CCACGCTGTCGGCACTTCCACTGCCATGGACATCAGCAGCAAATACGGGGCGTATGCCAGCCTGGGATTGACACTGAATG
GAATATTCACCGCATTACTGACACCGACTATCCTGCGATTATTAGGTGTTTTGTAA

Upstream 100 bases:

>100_bases
CACGTCAGATTAAACTGGCGAGTAGCCTACGCTTATCAGACTTTCACTTGTCCGACAAGCTACATTTAAAAAACAAAACT
AACTTAATGGATAAAGACAA

Downstream 100 bases:

>100_bases
AAACAAAATTCTTTCATTTTCCGTTATATAAAGAGTTAAACGCAAAAAGCATTTTATGATTCCATTTAAAGACATTACAC
TAGCTGATAGAGACACAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSFLENNFFLLAVTFGVFFFAKLLQKKTGLVLLNPILLTIAVLIIFLKMANISYETYNQGGHLIEFWLRPAVVALGVPLY
LQLEMIKKQLLPILLSQLAGCIVGVISVVLIAKFMGASQEVILSLAPKSVTTPIAMEVTKAIGGIPSLTAAVVVAVGLLG
AICGFKTMKIMHVGSPIAQGLSMGTAAHAVGTSTAMDISSKYGAYASLGLTLNGIFTALLTPTILRLLGVL

Sequences:

>Translated_231_residues
MSFLENNFFLLAVTFGVFFFAKLLQKKTGLVLLNPILLTIAVLIIFLKMANISYETYNQGGHLIEFWLRPAVVALGVPLY
LQLEMIKKQLLPILLSQLAGCIVGVISVVLIAKFMGASQEVILSLAPKSVTTPIAMEVTKAIGGIPSLTAAVVVAVGLLG
AICGFKTMKIMHVGSPIAQGLSMGTAAHAVGTSTAMDISSKYGAYASLGLTLNGIFTALLTPTILRLLGVL
>Mature_230_residues
SFLENNFFLLAVTFGVFFFAKLLQKKTGLVLLNPILLTIAVLIIFLKMANISYETYNQGGHLIEFWLRPAVVALGVPLYL
QLEMIKKQLLPILLSQLAGCIVGVISVVLIAKFMGASQEVILSLAPKSVTTPIAMEVTKAIGGIPSLTAAVVVAVGLLGA
ICGFKTMKIMHVGSPIAQGLSMGTAAHAVGTSTAMDISSKYGAYASLGLTLNGIFTALLTPTILRLLGVL

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=219, Percent_Identity=42.0091324200913, Blast_Score=168, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24393; Mature: 24262

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLENNFFLLAVTFGVFFFAKLLQKKTGLVLLNPILLTIAVLIIFLKMANISYETYNQG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCC
GHLIEFWLRPAVVALGVPLYLQLEMIKKQLLPILLSQLAGCIVGVISVVLIAKFMGASQE
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VILSLAPKSVTTPIAMEVTKAIGGIPSLTAAVVVAVGLLGAICGFKTMKIMHVGSPIAQG
HHHEECCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSMGTAAHAVGTSTAMDISSKYGAYASLGLTLNGIFTALLTPTILRLLGVL
HHHCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFLENNFFLLAVTFGVFFFAKLLQKKTGLVLLNPILLTIAVLIIFLKMANISYETYNQG
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCC
GHLIEFWLRPAVVALGVPLYLQLEMIKKQLLPILLSQLAGCIVGVISVVLIAKFMGASQE
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VILSLAPKSVTTPIAMEVTKAIGGIPSLTAAVVVAVGLLGAICGFKTMKIMHVGSPIAQG
HHHEECCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSMGTAAHAVGTSTAMDISSKYGAYASLGLTLNGIFTALLTPTILRLLGVL
HHHCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]