| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349082
Identifier: 29349082
GI number: 29349082
Start: 4766676
End: 4768682
Strand: Reverse
Name: 29349082
Synonym: BT_3674
Alternate gene names: NA
Gene position: 4768682-4766676 (Counterclockwise)
Preceding gene: 29349083
Following gene: 29349075
Centisome position: 76.17
GC content: 48.78
Gene sequence:
>2007_bases ATGAAAAACATTCTGACTGCGACATTCCTGACCTGCATCTGCATAACAGGCAGCGCGCAAATAAATCATGGATATCCTAT AGACCCTGTCCCCTTTACTTCCGTTAAAGTGACGGACAACTTTTGGGGACAGCGCCTTCAAGCAAGCCGTGAAGTAACCA TCCCTCTGGCATTCAGCAAATGTGAAGAGACGGGACGTTACGAAAACTTTGTAAAGGCAGCACATCCCAGCGATACCTAC AAAGTAGAGGGCTTCTCTTTCGACGATACCGATGTATACAAAACAATAGAAGGAGCCAGTTACTCTCTGCAAACCTATCC GGACAAGAAACTGCAAAAGTACATTGACAGCGTACTCGTCATTGTTGCCGGAGCACAGGAACCGGACGGTTACCTTTATA CAGCCCGCACCATGAACCCGAAGCACCCGCACAACTGGGCAGGAAAAGAGCGTTGGGTAGCGGTAGAGAACCTGAGTCAT GAGTTCTACAATCTGGGCCACATGATAGAAGGAGCCGTAGCGCATTATCAGGCTACCGGAAAACGAAACTTCCTCGATAT CGCCATTAAATATGCCGACTGTGTCTGCCGCGAAATCGGCAACGGCCCTCAACAGAAGAAATACGTACCGGGGCATCAGA TAGCCGAAATGGCTTTAGTCAAACTATACATGGCGACGGGAGACAAAAAGTATCTTGATCAGGCAAAATTCTTCCTGGAT ACCCGTGGATATACCAGCCGGAAAGACACCTATAGTCAGGCACACAAACCTGTGGTAGAACAGGATGAAGCCGTAGGACA TGCCGTACGTGCCGTATATATGTATTCCGGCATGGCAGATGTGGCAGCCATCACCGGAGACAGCAGCTACATCAAAGCGA TAGACAAGATTTGGGACAACATCGTTTCTAAAAAGATTTATATAACCGGAGGCATCGGTGCACACCATGCAGGCGAAGCA TTCGGCAACAACTACGAGCTGCCTAACCTGTCCGCTTATTGTGAAACCTGCGCCGCTATCGGCAATGTATACATGAACTA CCGTCTTTTCCTGCTGCACGGAGACGCCAAATATTTCGATGTCCTGGAACGCACACTATACAACGGTCTGATATCGGGTG TATCACTGGACGGAGGTTCTTTCTTCTACCCCAACCCGCTGTCTTCTAACGGAAAATACAGCCGCAAACCTTGGTTCGGC TGCGCCTGCTGCCCTTCAAACGTCAGCCGTTTCATTCCGTCATTACCGGGATATGTGTATGCCGTGAAGAACGATCAGGT ATACGTGAACCTTTATCTTTCCAACAAAGCCGAGCTAAAGGTAGACAAGAAAAAGATTCTGCTGGAACAAGAAACCGGCT ATCCCTGGAATGGCGACATCCGCCTGAAAATAACGCAGGGCAATCAGGACTTCACCATGAAACTCCGTATCCCCGGCTGG GTACGCGGCAATGTACTTCCCGGTGATCTGTATTCTTACGCCGACAATCAGAAACCTGCCTACCAAGTATCCGTAAACGG ACAGACAGTAGAAAGCGATGTCAATGATGGCTATCTCAGCATTGCCCGCAAATGGAAAAAGGGAGATGTGGTAGAGGTAC ATTTCGACATGATCCCCCGAATAGTAAAGGCAAATCCAAAAGTAGAAGCCGATCACGGACGTGTTGCCGTTGAACGCGGC CCCATCGTTTATTGCGCAGAATGGCCGGACAACAGATTCAACGTCCACAGCATACTTCTCAACCAGCATCCGCAATTCAA GGTAACAGACAAACCGGAGTTACTTTACGGCATCCGTCAGATAACGACCGATGCGCAGGCATTAAGTTATGACAAAGCTG GAAAACTGGTAACTAAAGACGTAGAACTCACACTGATACCCTATTATGCCTGGGCACATCGGGGCGAGGGTGACATGGAA GTATGGCTGCCTATCGATGTAAGCGCCACATCAGCACAGCCACAGGAAGCGGGAAAATGGGAAGATAACGGATTCTTTAA GAATTAA
Upstream 100 bases:
>100_bases TGTATTGACCGGATGGAATTCAATCCGGACGGAACAATCAAACAGGTAATCCCTACACCATAACACCGCAACAGAGATTC ATACTAAAATAAATACTAAG
Downstream 100 bases:
>100_bases TAATAAGCTGAGTCGAAGATAAGAAAGTACAGAGAACTTTTTTAGGCACGGATTTCACAGATGAACACGGCTTTTATTCA TTAAGACCGTGTAATCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 668; Mature: 668
Protein sequence:
>668_residues MKNILTATFLTCICITGSAQINHGYPIDPVPFTSVKVTDNFWGQRLQASREVTIPLAFSKCEETGRYENFVKAAHPSDTY KVEGFSFDDTDVYKTIEGASYSLQTYPDKKLQKYIDSVLVIVAGAQEPDGYLYTARTMNPKHPHNWAGKERWVAVENLSH EFYNLGHMIEGAVAHYQATGKRNFLDIAIKYADCVCREIGNGPQQKKYVPGHQIAEMALVKLYMATGDKKYLDQAKFFLD TRGYTSRKDTYSQAHKPVVEQDEAVGHAVRAVYMYSGMADVAAITGDSSYIKAIDKIWDNIVSKKIYITGGIGAHHAGEA FGNNYELPNLSAYCETCAAIGNVYMNYRLFLLHGDAKYFDVLERTLYNGLISGVSLDGGSFFYPNPLSSNGKYSRKPWFG CACCPSNVSRFIPSLPGYVYAVKNDQVYVNLYLSNKAELKVDKKKILLEQETGYPWNGDIRLKITQGNQDFTMKLRIPGW VRGNVLPGDLYSYADNQKPAYQVSVNGQTVESDVNDGYLSIARKWKKGDVVEVHFDMIPRIVKANPKVEADHGRVAVERG PIVYCAEWPDNRFNVHSILLNQHPQFKVTDKPELLYGIRQITTDAQALSYDKAGKLVTKDVELTLIPYYAWAHRGEGDME VWLPIDVSATSAQPQEAGKWEDNGFFKN
Sequences:
>Translated_668_residues MKNILTATFLTCICITGSAQINHGYPIDPVPFTSVKVTDNFWGQRLQASREVTIPLAFSKCEETGRYENFVKAAHPSDTY KVEGFSFDDTDVYKTIEGASYSLQTYPDKKLQKYIDSVLVIVAGAQEPDGYLYTARTMNPKHPHNWAGKERWVAVENLSH EFYNLGHMIEGAVAHYQATGKRNFLDIAIKYADCVCREIGNGPQQKKYVPGHQIAEMALVKLYMATGDKKYLDQAKFFLD TRGYTSRKDTYSQAHKPVVEQDEAVGHAVRAVYMYSGMADVAAITGDSSYIKAIDKIWDNIVSKKIYITGGIGAHHAGEA FGNNYELPNLSAYCETCAAIGNVYMNYRLFLLHGDAKYFDVLERTLYNGLISGVSLDGGSFFYPNPLSSNGKYSRKPWFG CACCPSNVSRFIPSLPGYVYAVKNDQVYVNLYLSNKAELKVDKKKILLEQETGYPWNGDIRLKITQGNQDFTMKLRIPGW VRGNVLPGDLYSYADNQKPAYQVSVNGQTVESDVNDGYLSIARKWKKGDVVEVHFDMIPRIVKANPKVEADHGRVAVERG PIVYCAEWPDNRFNVHSILLNQHPQFKVTDKPELLYGIRQITTDAQALSYDKAGKLVTKDVELTLIPYYAWAHRGEGDME VWLPIDVSATSAQPQEAGKWEDNGFFKN >Mature_668_residues MKNILTATFLTCICITGSAQINHGYPIDPVPFTSVKVTDNFWGQRLQASREVTIPLAFSKCEETGRYENFVKAAHPSDTY KVEGFSFDDTDVYKTIEGASYSLQTYPDKKLQKYIDSVLVIVAGAQEPDGYLYTARTMNPKHPHNWAGKERWVAVENLSH EFYNLGHMIEGAVAHYQATGKRNFLDIAIKYADCVCREIGNGPQQKKYVPGHQIAEMALVKLYMATGDKKYLDQAKFFLD TRGYTSRKDTYSQAHKPVVEQDEAVGHAVRAVYMYSGMADVAAITGDSSYIKAIDKIWDNIVSKKIYITGGIGAHHAGEA FGNNYELPNLSAYCETCAAIGNVYMNYRLFLLHGDAKYFDVLERTLYNGLISGVSLDGGSFFYPNPLSSNGKYSRKPWFG CACCPSNVSRFIPSLPGYVYAVKNDQVYVNLYLSNKAELKVDKKKILLEQETGYPWNGDIRLKITQGNQDFTMKLRIPGW VRGNVLPGDLYSYADNQKPAYQVSVNGQTVESDVNDGYLSIARKWKKGDVVEVHFDMIPRIVKANPKVEADHGRVAVERG PIVYCAEWPDNRFNVHSILLNQHPQFKVTDKPELLYGIRQITTDAQALSYDKAGKLVTKDVELTLIPYYAWAHRGEGDME VWLPIDVSATSAQPQEAGKWEDNGFFKN
Specific function: Unknown
COG id: COG3533
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75084; Mature: 75084
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILTATFLTCICITGSAQINHGYPIDPVPFTSVKVTDNFWGQRLQASREVTIPLAFSK CCCHHHHHHHHHEEEECCCEECCCCCCCCCCCCEEEEECCHHHHHHCCCCEEEEEEEHHH CEETGRYENFVKAAHPSDTYKVEGFSFDDTDVYKTIEGASYSLQTYPDKKLQKYIDSVLV HHHCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHEECCCCEEEECCCHHHHHHHHHEEEE IVAGAQEPDGYLYTARTMNPKHPHNWAGKERWVAVENLSHEFYNLGHMIEGAVAHYQATG EEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHCCCC KRNFLDIAIKYADCVCREIGNGPQQKKYVPGHQIAEMALVKLYMATGDKKYLDQAKFFLD CCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEE TRGYTSRKDTYSQAHKPVVEQDEAVGHAVRAVYMYSGMADVAAITGDSSYIKAIDKIWDN CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH IVSKKIYITGGIGAHHAGEAFGNNYELPNLSAYCETCAAIGNVYMNYRLFLLHGDAKYFD HHCCEEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEECCCHHHH VLERTLYNGLISGVSLDGGSFFYPNPLSSNGKYSRKPWFGCACCPSNVSRFIPSLPGYVY HHHHHHHHHHHCCEEECCCCEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCEEE AVKNDQVYVNLYLSNKAELKVDKKKILLEQETGYPWNGDIRLKITQGNQDFTMKLRIPGW EEECCEEEEEEEECCCCEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCE VRGNVLPGDLYSYADNQKPAYQVSVNGQTVESDVNDGYLSIARKWKKGDVVEVHFDMIPR EECCCCCCHHHHHCCCCCCEEEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEHHHHHH IVKANPKVEADHGRVAVERGPIVYCAEWPDNRFNVHSILLNQHPQFKVTDKPELLYGIRQ HHCCCCCEECCCCEEEEECCCEEEEECCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHH ITTDAQALSYDKAGKLVTKDVELTLIPYYAWAHRGEGDMEVWLPIDVSATSAQPQEAGKW HHCCHHHHCCCCCCCEEEECEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCHHCCCC EDNGFFKN CCCCCCCC >Mature Secondary Structure MKNILTATFLTCICITGSAQINHGYPIDPVPFTSVKVTDNFWGQRLQASREVTIPLAFSK CCCHHHHHHHHHEEEECCCEECCCCCCCCCCCCEEEEECCHHHHHHCCCCEEEEEEEHHH CEETGRYENFVKAAHPSDTYKVEGFSFDDTDVYKTIEGASYSLQTYPDKKLQKYIDSVLV HHHCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHEECCCCEEEECCCHHHHHHHHHEEEE IVAGAQEPDGYLYTARTMNPKHPHNWAGKERWVAVENLSHEFYNLGHMIEGAVAHYQATG EEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHCCCC KRNFLDIAIKYADCVCREIGNGPQQKKYVPGHQIAEMALVKLYMATGDKKYLDQAKFFLD CCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEE TRGYTSRKDTYSQAHKPVVEQDEAVGHAVRAVYMYSGMADVAAITGDSSYIKAIDKIWDN CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH IVSKKIYITGGIGAHHAGEAFGNNYELPNLSAYCETCAAIGNVYMNYRLFLLHGDAKYFD HHCCEEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEECCCHHHH VLERTLYNGLISGVSLDGGSFFYPNPLSSNGKYSRKPWFGCACCPSNVSRFIPSLPGYVY HHHHHHHHHHHCCEEECCCCEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCEEE AVKNDQVYVNLYLSNKAELKVDKKKILLEQETGYPWNGDIRLKITQGNQDFTMKLRIPGW EEECCEEEEEEEECCCCEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCE VRGNVLPGDLYSYADNQKPAYQVSVNGQTVESDVNDGYLSIARKWKKGDVVEVHFDMIPR EECCCCCCHHHHHCCCCCCEEEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEHHHHHH IVKANPKVEADHGRVAVERGPIVYCAEWPDNRFNVHSILLNQHPQFKVTDKPELLYGIRQ HHCCCCCEECCCCEEEEECCCEEEEECCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHH ITTDAQALSYDKAGKLVTKDVELTLIPYYAWAHRGEGDMEVWLPIDVSATSAQPQEAGKW HHCCHHHHCCCCCCCEEEECEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCHHCCCC EDNGFFKN CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA