Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349082

Identifier: 29349082

GI number: 29349082

Start: 4766676

End: 4768682

Strand: Reverse

Name: 29349082

Synonym: BT_3674

Alternate gene names: NA

Gene position: 4768682-4766676 (Counterclockwise)

Preceding gene: 29349083

Following gene: 29349075

Centisome position: 76.17

GC content: 48.78

Gene sequence:

>2007_bases
ATGAAAAACATTCTGACTGCGACATTCCTGACCTGCATCTGCATAACAGGCAGCGCGCAAATAAATCATGGATATCCTAT
AGACCCTGTCCCCTTTACTTCCGTTAAAGTGACGGACAACTTTTGGGGACAGCGCCTTCAAGCAAGCCGTGAAGTAACCA
TCCCTCTGGCATTCAGCAAATGTGAAGAGACGGGACGTTACGAAAACTTTGTAAAGGCAGCACATCCCAGCGATACCTAC
AAAGTAGAGGGCTTCTCTTTCGACGATACCGATGTATACAAAACAATAGAAGGAGCCAGTTACTCTCTGCAAACCTATCC
GGACAAGAAACTGCAAAAGTACATTGACAGCGTACTCGTCATTGTTGCCGGAGCACAGGAACCGGACGGTTACCTTTATA
CAGCCCGCACCATGAACCCGAAGCACCCGCACAACTGGGCAGGAAAAGAGCGTTGGGTAGCGGTAGAGAACCTGAGTCAT
GAGTTCTACAATCTGGGCCACATGATAGAAGGAGCCGTAGCGCATTATCAGGCTACCGGAAAACGAAACTTCCTCGATAT
CGCCATTAAATATGCCGACTGTGTCTGCCGCGAAATCGGCAACGGCCCTCAACAGAAGAAATACGTACCGGGGCATCAGA
TAGCCGAAATGGCTTTAGTCAAACTATACATGGCGACGGGAGACAAAAAGTATCTTGATCAGGCAAAATTCTTCCTGGAT
ACCCGTGGATATACCAGCCGGAAAGACACCTATAGTCAGGCACACAAACCTGTGGTAGAACAGGATGAAGCCGTAGGACA
TGCCGTACGTGCCGTATATATGTATTCCGGCATGGCAGATGTGGCAGCCATCACCGGAGACAGCAGCTACATCAAAGCGA
TAGACAAGATTTGGGACAACATCGTTTCTAAAAAGATTTATATAACCGGAGGCATCGGTGCACACCATGCAGGCGAAGCA
TTCGGCAACAACTACGAGCTGCCTAACCTGTCCGCTTATTGTGAAACCTGCGCCGCTATCGGCAATGTATACATGAACTA
CCGTCTTTTCCTGCTGCACGGAGACGCCAAATATTTCGATGTCCTGGAACGCACACTATACAACGGTCTGATATCGGGTG
TATCACTGGACGGAGGTTCTTTCTTCTACCCCAACCCGCTGTCTTCTAACGGAAAATACAGCCGCAAACCTTGGTTCGGC
TGCGCCTGCTGCCCTTCAAACGTCAGCCGTTTCATTCCGTCATTACCGGGATATGTGTATGCCGTGAAGAACGATCAGGT
ATACGTGAACCTTTATCTTTCCAACAAAGCCGAGCTAAAGGTAGACAAGAAAAAGATTCTGCTGGAACAAGAAACCGGCT
ATCCCTGGAATGGCGACATCCGCCTGAAAATAACGCAGGGCAATCAGGACTTCACCATGAAACTCCGTATCCCCGGCTGG
GTACGCGGCAATGTACTTCCCGGTGATCTGTATTCTTACGCCGACAATCAGAAACCTGCCTACCAAGTATCCGTAAACGG
ACAGACAGTAGAAAGCGATGTCAATGATGGCTATCTCAGCATTGCCCGCAAATGGAAAAAGGGAGATGTGGTAGAGGTAC
ATTTCGACATGATCCCCCGAATAGTAAAGGCAAATCCAAAAGTAGAAGCCGATCACGGACGTGTTGCCGTTGAACGCGGC
CCCATCGTTTATTGCGCAGAATGGCCGGACAACAGATTCAACGTCCACAGCATACTTCTCAACCAGCATCCGCAATTCAA
GGTAACAGACAAACCGGAGTTACTTTACGGCATCCGTCAGATAACGACCGATGCGCAGGCATTAAGTTATGACAAAGCTG
GAAAACTGGTAACTAAAGACGTAGAACTCACACTGATACCCTATTATGCCTGGGCACATCGGGGCGAGGGTGACATGGAA
GTATGGCTGCCTATCGATGTAAGCGCCACATCAGCACAGCCACAGGAAGCGGGAAAATGGGAAGATAACGGATTCTTTAA
GAATTAA

Upstream 100 bases:

>100_bases
TGTATTGACCGGATGGAATTCAATCCGGACGGAACAATCAAACAGGTAATCCCTACACCATAACACCGCAACAGAGATTC
ATACTAAAATAAATACTAAG

Downstream 100 bases:

>100_bases
TAATAAGCTGAGTCGAAGATAAGAAAGTACAGAGAACTTTTTTAGGCACGGATTTCACAGATGAACACGGCTTTTATTCA
TTAAGACCGTGTAATCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 668; Mature: 668

Protein sequence:

>668_residues
MKNILTATFLTCICITGSAQINHGYPIDPVPFTSVKVTDNFWGQRLQASREVTIPLAFSKCEETGRYENFVKAAHPSDTY
KVEGFSFDDTDVYKTIEGASYSLQTYPDKKLQKYIDSVLVIVAGAQEPDGYLYTARTMNPKHPHNWAGKERWVAVENLSH
EFYNLGHMIEGAVAHYQATGKRNFLDIAIKYADCVCREIGNGPQQKKYVPGHQIAEMALVKLYMATGDKKYLDQAKFFLD
TRGYTSRKDTYSQAHKPVVEQDEAVGHAVRAVYMYSGMADVAAITGDSSYIKAIDKIWDNIVSKKIYITGGIGAHHAGEA
FGNNYELPNLSAYCETCAAIGNVYMNYRLFLLHGDAKYFDVLERTLYNGLISGVSLDGGSFFYPNPLSSNGKYSRKPWFG
CACCPSNVSRFIPSLPGYVYAVKNDQVYVNLYLSNKAELKVDKKKILLEQETGYPWNGDIRLKITQGNQDFTMKLRIPGW
VRGNVLPGDLYSYADNQKPAYQVSVNGQTVESDVNDGYLSIARKWKKGDVVEVHFDMIPRIVKANPKVEADHGRVAVERG
PIVYCAEWPDNRFNVHSILLNQHPQFKVTDKPELLYGIRQITTDAQALSYDKAGKLVTKDVELTLIPYYAWAHRGEGDME
VWLPIDVSATSAQPQEAGKWEDNGFFKN

Sequences:

>Translated_668_residues
MKNILTATFLTCICITGSAQINHGYPIDPVPFTSVKVTDNFWGQRLQASREVTIPLAFSKCEETGRYENFVKAAHPSDTY
KVEGFSFDDTDVYKTIEGASYSLQTYPDKKLQKYIDSVLVIVAGAQEPDGYLYTARTMNPKHPHNWAGKERWVAVENLSH
EFYNLGHMIEGAVAHYQATGKRNFLDIAIKYADCVCREIGNGPQQKKYVPGHQIAEMALVKLYMATGDKKYLDQAKFFLD
TRGYTSRKDTYSQAHKPVVEQDEAVGHAVRAVYMYSGMADVAAITGDSSYIKAIDKIWDNIVSKKIYITGGIGAHHAGEA
FGNNYELPNLSAYCETCAAIGNVYMNYRLFLLHGDAKYFDVLERTLYNGLISGVSLDGGSFFYPNPLSSNGKYSRKPWFG
CACCPSNVSRFIPSLPGYVYAVKNDQVYVNLYLSNKAELKVDKKKILLEQETGYPWNGDIRLKITQGNQDFTMKLRIPGW
VRGNVLPGDLYSYADNQKPAYQVSVNGQTVESDVNDGYLSIARKWKKGDVVEVHFDMIPRIVKANPKVEADHGRVAVERG
PIVYCAEWPDNRFNVHSILLNQHPQFKVTDKPELLYGIRQITTDAQALSYDKAGKLVTKDVELTLIPYYAWAHRGEGDME
VWLPIDVSATSAQPQEAGKWEDNGFFKN
>Mature_668_residues
MKNILTATFLTCICITGSAQINHGYPIDPVPFTSVKVTDNFWGQRLQASREVTIPLAFSKCEETGRYENFVKAAHPSDTY
KVEGFSFDDTDVYKTIEGASYSLQTYPDKKLQKYIDSVLVIVAGAQEPDGYLYTARTMNPKHPHNWAGKERWVAVENLSH
EFYNLGHMIEGAVAHYQATGKRNFLDIAIKYADCVCREIGNGPQQKKYVPGHQIAEMALVKLYMATGDKKYLDQAKFFLD
TRGYTSRKDTYSQAHKPVVEQDEAVGHAVRAVYMYSGMADVAAITGDSSYIKAIDKIWDNIVSKKIYITGGIGAHHAGEA
FGNNYELPNLSAYCETCAAIGNVYMNYRLFLLHGDAKYFDVLERTLYNGLISGVSLDGGSFFYPNPLSSNGKYSRKPWFG
CACCPSNVSRFIPSLPGYVYAVKNDQVYVNLYLSNKAELKVDKKKILLEQETGYPWNGDIRLKITQGNQDFTMKLRIPGW
VRGNVLPGDLYSYADNQKPAYQVSVNGQTVESDVNDGYLSIARKWKKGDVVEVHFDMIPRIVKANPKVEADHGRVAVERG
PIVYCAEWPDNRFNVHSILLNQHPQFKVTDKPELLYGIRQITTDAQALSYDKAGKLVTKDVELTLIPYYAWAHRGEGDME
VWLPIDVSATSAQPQEAGKWEDNGFFKN

Specific function: Unknown

COG id: COG3533

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75084; Mature: 75084

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILTATFLTCICITGSAQINHGYPIDPVPFTSVKVTDNFWGQRLQASREVTIPLAFSK
CCCHHHHHHHHHEEEECCCEECCCCCCCCCCCCEEEEECCHHHHHHCCCCEEEEEEEHHH
CEETGRYENFVKAAHPSDTYKVEGFSFDDTDVYKTIEGASYSLQTYPDKKLQKYIDSVLV
HHHCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHEECCCCEEEECCCHHHHHHHHHEEEE
IVAGAQEPDGYLYTARTMNPKHPHNWAGKERWVAVENLSHEFYNLGHMIEGAVAHYQATG
EEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHCCCC
KRNFLDIAIKYADCVCREIGNGPQQKKYVPGHQIAEMALVKLYMATGDKKYLDQAKFFLD
CCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEE
TRGYTSRKDTYSQAHKPVVEQDEAVGHAVRAVYMYSGMADVAAITGDSSYIKAIDKIWDN
CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH
IVSKKIYITGGIGAHHAGEAFGNNYELPNLSAYCETCAAIGNVYMNYRLFLLHGDAKYFD
HHCCEEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEECCCHHHH
VLERTLYNGLISGVSLDGGSFFYPNPLSSNGKYSRKPWFGCACCPSNVSRFIPSLPGYVY
HHHHHHHHHHHCCEEECCCCEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCEEE
AVKNDQVYVNLYLSNKAELKVDKKKILLEQETGYPWNGDIRLKITQGNQDFTMKLRIPGW
EEECCEEEEEEEECCCCEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCE
VRGNVLPGDLYSYADNQKPAYQVSVNGQTVESDVNDGYLSIARKWKKGDVVEVHFDMIPR
EECCCCCCHHHHHCCCCCCEEEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEHHHHHH
IVKANPKVEADHGRVAVERGPIVYCAEWPDNRFNVHSILLNQHPQFKVTDKPELLYGIRQ
HHCCCCCEECCCCEEEEECCCEEEEECCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHH
ITTDAQALSYDKAGKLVTKDVELTLIPYYAWAHRGEGDMEVWLPIDVSATSAQPQEAGKW
HHCCHHHHCCCCCCCEEEECEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCHHCCCC
EDNGFFKN
CCCCCCCC
>Mature Secondary Structure
MKNILTATFLTCICITGSAQINHGYPIDPVPFTSVKVTDNFWGQRLQASREVTIPLAFSK
CCCHHHHHHHHHEEEECCCEECCCCCCCCCCCCEEEEECCHHHHHHCCCCEEEEEEEHHH
CEETGRYENFVKAAHPSDTYKVEGFSFDDTDVYKTIEGASYSLQTYPDKKLQKYIDSVLV
HHHCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHEECCCCEEEECCCHHHHHHHHHEEEE
IVAGAQEPDGYLYTARTMNPKHPHNWAGKERWVAVENLSHEFYNLGHMIEGAVAHYQATG
EEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHCCCC
KRNFLDIAIKYADCVCREIGNGPQQKKYVPGHQIAEMALVKLYMATGDKKYLDQAKFFLD
CCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEE
TRGYTSRKDTYSQAHKPVVEQDEAVGHAVRAVYMYSGMADVAAITGDSSYIKAIDKIWDN
CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH
IVSKKIYITGGIGAHHAGEAFGNNYELPNLSAYCETCAAIGNVYMNYRLFLLHGDAKYFD
HHCCEEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEECCCHHHH
VLERTLYNGLISGVSLDGGSFFYPNPLSSNGKYSRKPWFGCACCPSNVSRFIPSLPGYVY
HHHHHHHHHHHCCEEECCCCEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCEEE
AVKNDQVYVNLYLSNKAELKVDKKKILLEQETGYPWNGDIRLKITQGNQDFTMKLRIPGW
EEECCEEEEEEEECCCCEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCE
VRGNVLPGDLYSYADNQKPAYQVSVNGQTVESDVNDGYLSIARKWKKGDVVEVHFDMIPR
EECCCCCCHHHHHCCCCCCEEEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEHHHHHH
IVKANPKVEADHGRVAVERGPIVYCAEWPDNRFNVHSILLNQHPQFKVTDKPELLYGIRQ
HHCCCCCEECCCCEEEEECCCEEEEECCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHH
ITTDAQALSYDKAGKLVTKDVELTLIPYYAWAHRGEGDMEVWLPIDVSATSAQPQEAGKW
HHCCHHHHCCCCCCCEEEECEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCHHCCCC
EDNGFFKN
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA