| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349033
Identifier: 29349033
GI number: 29349033
Start: 4697894
End: 4698928
Strand: Reverse
Name: 29349033
Synonym: BT_3625
Alternate gene names: NA
Gene position: 4698928-4697894 (Counterclockwise)
Preceding gene: 29349034
Following gene: 29349032
Centisome position: 75.06
GC content: 46.18
Gene sequence:
>1035_bases ATGAAACGTTTCAGTACCCTACTATTATATGTCACCATCGCCTTCCTGCTTCTCTGGCAGTTGCCTTGGTGTTACAACTT CTTTGTCGTAAAGCCGGAGAAGACTCCTTTCACTCTATATAGTTTCGTGATCGGCGATTTCGCCTTGATGGGACAGGAAG AGGGAAAAGGAACCGTACGTCGCGACGCTGCCGGAAACATTTATTCCGAAGCAGCTTTCGACAGTATTCTGCCTATGTTT TATTTCCGCCAGTTGATGTCCGACGAACGTTTTCCGGATACGATTAACGGGATAGCTGTCACTCCGAAGATCGTGCAGAC GGAGAATTTCAATTTCCGCAGCGTACCTACGGATATCAACGCTCCTTCCATCGGTCTTTATCCTCTGTTGGAGTCGATGT CCGGGCGTGTAGACCTGAAGATGCCGGATGATGTTTTCCGCATTACTTCGCAAGGCATTGAGTTTATCGATATGGCTTCC AATAGCGTGAATGCAGAAAAAAGCCTCTTGTTTACAGAAGCTATGACCAAGAAGAATTTCCGCTTTCCGGCCATTGAGAT CGCAGGAAACCCGACGGTGAAGAAGGAGTATGACGAAGGATACCTTCTGTTGGATGCCGACCGTCGTCTGTTCCATCTGA AACAGGTGAAAGGGCGTCCCTACGTTCGTGCTATCACTTTGCCGGAAGGATTAACATTAGAGCACCTTTATCTGACGGAA TTCAGAAATAAAAAGACGCTTGCTTTCCTGACAGATATCAACAATGCTTTATATGTGCTGAAAAGCCGCACGTATGATGT GGTGAAAACAGGAGTTCCTGCATTCAATCCCGAAACGGACGCGCTGACCATCATTGGAAATATGTTCGACTGGACGGTAC GGGTGACGAGTCCGTCTTCCGATAATTACTATGCTTTGAACGCGGATGATTATTCACTGATAAAGAAGCTGGAAAATAAT TCGAATACTCATTATATGCCCGGCATCAGTTTCACTTCTTATACGGACAAGTATGTGATGCCGCGCTTTGAGTAA
Upstream 100 bases:
>100_bases ACCGCGTCTTTCTCCTGGCTCTCCATCGTACGGTTCAAAGCGGGAAAGCAGGACTAGGATAATGAAGAATGAAGAACTAA AAATGAAGAATTAAATAAAG
Downstream 100 bases:
>100_bases TAACAGGAATAATAACTTTTAGGCACGGATTACACAGATTAACACGGTTTTAGCGTTGTGAAAGCATAAAGCTATCGTGT TAATTCGTATAATCCGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MKRFSTLLLYVTIAFLLLWQLPWCYNFFVVKPEKTPFTLYSFVIGDFALMGQEEGKGTVRRDAAGNIYSEAAFDSILPMF YFRQLMSDERFPDTINGIAVTPKIVQTENFNFRSVPTDINAPSIGLYPLLESMSGRVDLKMPDDVFRITSQGIEFIDMAS NSVNAEKSLLFTEAMTKKNFRFPAIEIAGNPTVKKEYDEGYLLLDADRRLFHLKQVKGRPYVRAITLPEGLTLEHLYLTE FRNKKTLAFLTDINNALYVLKSRTYDVVKTGVPAFNPETDALTIIGNMFDWTVRVTSPSSDNYYALNADDYSLIKKLENN SNTHYMPGISFTSYTDKYVMPRFE
Sequences:
>Translated_344_residues MKRFSTLLLYVTIAFLLLWQLPWCYNFFVVKPEKTPFTLYSFVIGDFALMGQEEGKGTVRRDAAGNIYSEAAFDSILPMF YFRQLMSDERFPDTINGIAVTPKIVQTENFNFRSVPTDINAPSIGLYPLLESMSGRVDLKMPDDVFRITSQGIEFIDMAS NSVNAEKSLLFTEAMTKKNFRFPAIEIAGNPTVKKEYDEGYLLLDADRRLFHLKQVKGRPYVRAITLPEGLTLEHLYLTE FRNKKTLAFLTDINNALYVLKSRTYDVVKTGVPAFNPETDALTIIGNMFDWTVRVTSPSSDNYYALNADDYSLIKKLENN SNTHYMPGISFTSYTDKYVMPRFE >Mature_344_residues MKRFSTLLLYVTIAFLLLWQLPWCYNFFVVKPEKTPFTLYSFVIGDFALMGQEEGKGTVRRDAAGNIYSEAAFDSILPMF YFRQLMSDERFPDTINGIAVTPKIVQTENFNFRSVPTDINAPSIGLYPLLESMSGRVDLKMPDDVFRITSQGIEFIDMAS NSVNAEKSLLFTEAMTKKNFRFPAIEIAGNPTVKKEYDEGYLLLDADRRLFHLKQVKGRPYVRAITLPEGLTLEHLYLTE FRNKKTLAFLTDINNALYVLKSRTYDVVKTGVPAFNPETDALTIIGNMFDWTVRVTSPSSDNYYALNADDYSLIKKLENN SNTHYMPGISFTSYTDKYVMPRFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39406; Mature: 39406
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFSTLLLYVTIAFLLLWQLPWCYNFFVVKPEKTPFTLYSFVIGDFALMGQEEGKGTVR CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCEE RDAAGNIYSEAAFDSILPMFYFRQLMSDERFPDTINGIAVTPKIVQTENFNFRSVPTDIN ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEECCCCCEECCCCCC APSIGLYPLLESMSGRVDLKMPDDVFRITSQGIEFIDMASNSVNAEKSLLFTEAMTKKNF CCCCCHHHHHHHCCCEEEEECCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCC RFPAIEIAGNPTVKKEYDEGYLLLDADRRLFHLKQVKGRPYVRAITLPEGLTLEHLYLTE CCCEEEECCCCCCCEECCCCEEEEECCCCEEEHHHHCCCCEEEEEECCCCCEEEEEEEEH FRNKKTLAFLTDINNALYVLKSRTYDVVKTGVPAFNPETDALTIIGNMFDWTVRVTSPSS HCCCCEEEEEEECCCEEEEEECCCHHHHHCCCCCCCCCCCEEEEEECCEEEEEEEECCCC DNYYALNADDYSLIKKLENNSNTHYMPGISFTSYTDKYVMPRFE CCEEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRFSTLLLYVTIAFLLLWQLPWCYNFFVVKPEKTPFTLYSFVIGDFALMGQEEGKGTVR CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCEE RDAAGNIYSEAAFDSILPMFYFRQLMSDERFPDTINGIAVTPKIVQTENFNFRSVPTDIN ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEECCCCCEECCCCCC APSIGLYPLLESMSGRVDLKMPDDVFRITSQGIEFIDMASNSVNAEKSLLFTEAMTKKNF CCCCCHHHHHHHCCCEEEEECCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCC RFPAIEIAGNPTVKKEYDEGYLLLDADRRLFHLKQVKGRPYVRAITLPEGLTLEHLYLTE CCCEEEECCCCCCCEECCCCEEEEECCCCEEEHHHHCCCCEEEEEECCCCCEEEEEEEEH FRNKKTLAFLTDINNALYVLKSRTYDVVKTGVPAFNPETDALTIIGNMFDWTVRVTSPSS HCCCCEEEEEEECCCEEEEEECCCHHHHHCCCCCCCCCCCEEEEEECCEEEEEEEECCCC DNYYALNADDYSLIKKLENNSNTHYMPGISFTSYTDKYVMPRFE CCEEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA