Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349033

Identifier: 29349033

GI number: 29349033

Start: 4697894

End: 4698928

Strand: Reverse

Name: 29349033

Synonym: BT_3625

Alternate gene names: NA

Gene position: 4698928-4697894 (Counterclockwise)

Preceding gene: 29349034

Following gene: 29349032

Centisome position: 75.06

GC content: 46.18

Gene sequence:

>1035_bases
ATGAAACGTTTCAGTACCCTACTATTATATGTCACCATCGCCTTCCTGCTTCTCTGGCAGTTGCCTTGGTGTTACAACTT
CTTTGTCGTAAAGCCGGAGAAGACTCCTTTCACTCTATATAGTTTCGTGATCGGCGATTTCGCCTTGATGGGACAGGAAG
AGGGAAAAGGAACCGTACGTCGCGACGCTGCCGGAAACATTTATTCCGAAGCAGCTTTCGACAGTATTCTGCCTATGTTT
TATTTCCGCCAGTTGATGTCCGACGAACGTTTTCCGGATACGATTAACGGGATAGCTGTCACTCCGAAGATCGTGCAGAC
GGAGAATTTCAATTTCCGCAGCGTACCTACGGATATCAACGCTCCTTCCATCGGTCTTTATCCTCTGTTGGAGTCGATGT
CCGGGCGTGTAGACCTGAAGATGCCGGATGATGTTTTCCGCATTACTTCGCAAGGCATTGAGTTTATCGATATGGCTTCC
AATAGCGTGAATGCAGAAAAAAGCCTCTTGTTTACAGAAGCTATGACCAAGAAGAATTTCCGCTTTCCGGCCATTGAGAT
CGCAGGAAACCCGACGGTGAAGAAGGAGTATGACGAAGGATACCTTCTGTTGGATGCCGACCGTCGTCTGTTCCATCTGA
AACAGGTGAAAGGGCGTCCCTACGTTCGTGCTATCACTTTGCCGGAAGGATTAACATTAGAGCACCTTTATCTGACGGAA
TTCAGAAATAAAAAGACGCTTGCTTTCCTGACAGATATCAACAATGCTTTATATGTGCTGAAAAGCCGCACGTATGATGT
GGTGAAAACAGGAGTTCCTGCATTCAATCCCGAAACGGACGCGCTGACCATCATTGGAAATATGTTCGACTGGACGGTAC
GGGTGACGAGTCCGTCTTCCGATAATTACTATGCTTTGAACGCGGATGATTATTCACTGATAAAGAAGCTGGAAAATAAT
TCGAATACTCATTATATGCCCGGCATCAGTTTCACTTCTTATACGGACAAGTATGTGATGCCGCGCTTTGAGTAA

Upstream 100 bases:

>100_bases
ACCGCGTCTTTCTCCTGGCTCTCCATCGTACGGTTCAAAGCGGGAAAGCAGGACTAGGATAATGAAGAATGAAGAACTAA
AAATGAAGAATTAAATAAAG

Downstream 100 bases:

>100_bases
TAACAGGAATAATAACTTTTAGGCACGGATTACACAGATTAACACGGTTTTAGCGTTGTGAAAGCATAAAGCTATCGTGT
TAATTCGTATAATCCGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKRFSTLLLYVTIAFLLLWQLPWCYNFFVVKPEKTPFTLYSFVIGDFALMGQEEGKGTVRRDAAGNIYSEAAFDSILPMF
YFRQLMSDERFPDTINGIAVTPKIVQTENFNFRSVPTDINAPSIGLYPLLESMSGRVDLKMPDDVFRITSQGIEFIDMAS
NSVNAEKSLLFTEAMTKKNFRFPAIEIAGNPTVKKEYDEGYLLLDADRRLFHLKQVKGRPYVRAITLPEGLTLEHLYLTE
FRNKKTLAFLTDINNALYVLKSRTYDVVKTGVPAFNPETDALTIIGNMFDWTVRVTSPSSDNYYALNADDYSLIKKLENN
SNTHYMPGISFTSYTDKYVMPRFE

Sequences:

>Translated_344_residues
MKRFSTLLLYVTIAFLLLWQLPWCYNFFVVKPEKTPFTLYSFVIGDFALMGQEEGKGTVRRDAAGNIYSEAAFDSILPMF
YFRQLMSDERFPDTINGIAVTPKIVQTENFNFRSVPTDINAPSIGLYPLLESMSGRVDLKMPDDVFRITSQGIEFIDMAS
NSVNAEKSLLFTEAMTKKNFRFPAIEIAGNPTVKKEYDEGYLLLDADRRLFHLKQVKGRPYVRAITLPEGLTLEHLYLTE
FRNKKTLAFLTDINNALYVLKSRTYDVVKTGVPAFNPETDALTIIGNMFDWTVRVTSPSSDNYYALNADDYSLIKKLENN
SNTHYMPGISFTSYTDKYVMPRFE
>Mature_344_residues
MKRFSTLLLYVTIAFLLLWQLPWCYNFFVVKPEKTPFTLYSFVIGDFALMGQEEGKGTVRRDAAGNIYSEAAFDSILPMF
YFRQLMSDERFPDTINGIAVTPKIVQTENFNFRSVPTDINAPSIGLYPLLESMSGRVDLKMPDDVFRITSQGIEFIDMAS
NSVNAEKSLLFTEAMTKKNFRFPAIEIAGNPTVKKEYDEGYLLLDADRRLFHLKQVKGRPYVRAITLPEGLTLEHLYLTE
FRNKKTLAFLTDINNALYVLKSRTYDVVKTGVPAFNPETDALTIIGNMFDWTVRVTSPSSDNYYALNADDYSLIKKLENN
SNTHYMPGISFTSYTDKYVMPRFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39406; Mature: 39406

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFSTLLLYVTIAFLLLWQLPWCYNFFVVKPEKTPFTLYSFVIGDFALMGQEEGKGTVR
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCEE
RDAAGNIYSEAAFDSILPMFYFRQLMSDERFPDTINGIAVTPKIVQTENFNFRSVPTDIN
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEECCCCCEECCCCCC
APSIGLYPLLESMSGRVDLKMPDDVFRITSQGIEFIDMASNSVNAEKSLLFTEAMTKKNF
CCCCCHHHHHHHCCCEEEEECCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
RFPAIEIAGNPTVKKEYDEGYLLLDADRRLFHLKQVKGRPYVRAITLPEGLTLEHLYLTE
CCCEEEECCCCCCCEECCCCEEEEECCCCEEEHHHHCCCCEEEEEECCCCCEEEEEEEEH
FRNKKTLAFLTDINNALYVLKSRTYDVVKTGVPAFNPETDALTIIGNMFDWTVRVTSPSS
HCCCCEEEEEEECCCEEEEEECCCHHHHHCCCCCCCCCCCEEEEEECCEEEEEEEECCCC
DNYYALNADDYSLIKKLENNSNTHYMPGISFTSYTDKYVMPRFE
CCEEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRFSTLLLYVTIAFLLLWQLPWCYNFFVVKPEKTPFTLYSFVIGDFALMGQEEGKGTVR
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCEE
RDAAGNIYSEAAFDSILPMFYFRQLMSDERFPDTINGIAVTPKIVQTENFNFRSVPTDIN
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEECCCCCEECCCCCC
APSIGLYPLLESMSGRVDLKMPDDVFRITSQGIEFIDMASNSVNAEKSLLFTEAMTKKNF
CCCCCHHHHHHHCCCEEEEECCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
RFPAIEIAGNPTVKKEYDEGYLLLDADRRLFHLKQVKGRPYVRAITLPEGLTLEHLYLTE
CCCEEEECCCCCCCEECCCCEEEEECCCCEEEHHHHCCCCEEEEEECCCCCEEEEEEEEH
FRNKKTLAFLTDINNALYVLKSRTYDVVKTGVPAFNPETDALTIIGNMFDWTVRVTSPSS
HCCCCEEEEEEECCCEEEEEECCCHHHHHCCCCCCCCCCCEEEEEECCEEEEEEEECCCC
DNYYALNADDYSLIKKLENNSNTHYMPGISFTSYTDKYVMPRFE
CCEEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA