| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349034
Identifier: 29349034
GI number: 29349034
Start: 4698972
End: 4699640
Strand: Reverse
Name: 29349034
Synonym: BT_3626
Alternate gene names: NA
Gene position: 4699640-4698972 (Counterclockwise)
Preceding gene: 29349035
Following gene: 29349033
Centisome position: 75.07
GC content: 49.33
Gene sequence:
>669_bases ATGTACGCTATATTTTATAAAGAATGGATCAAGACACGGTGGTATTTTCTGCTTGCCGTAGTCACCACACTCGGTTTTAC AGGCTACTGTATGCTTCGCATCAACCGGGTGATAGAAATGAAAGGCGCCGCGCATGTATGGGAAGTCATGATGCAGCGGG ATGCCATATTCATCGATATGTTACAATACATCCCCCTGATTGCCGGAGTGTTGATGGCCATCGTGCAGTTTGTTCCCGAG ATGCAGCGCAAATGTCTGAAACTGACTTTGCACCTGCCCTATCCCGAACTGAAAATGACCGGCAATATGTTGTTCTCCGG TTTGGTACTGTTGCTTGTCTGCTTCGCTTCCAACTTCCTTCTGATGGAGGTCTATCTGAGCGGAGTACTGGCTCACGAAC TGAAGAATCATATACTGCTGACCGCCCTCACGTGGTATCTTGCCGGTATTTCCGGCTACCTGCTCATCGCATGGATCTGC CTCGAACCGGCATGGAAACGCAGAATCATCAATCTCATTATCGCCGTATTGTTACTGCGAATCTTCTTCCTGTCGCCCAC GCCGGAAGCTTATAACAAATTCCTCCCGTATCTGCTGGTCTATACGTTGCTGACCGCGTCTTTCTCCTGGCTCTCCATCG TACGGTTCAAAGCGGGAAAGCAGGACTAG
Upstream 100 bases:
>100_bases CATAGCGAACATGTGAATCTGGAAGATGCCTTCATCGGTCTGACCGGCAAATACTGATTCAATAAAATAATTAAAGATTA AAAAGTAAATTAGAAGTCTC
Downstream 100 bases:
>100_bases GATAATGAAGAATGAAGAACTAAAAATGAAGAATTAAATAAAGATGAAACGTTTCAGTACCCTACTATTATATGTCACCA TCGCCTTCCTGCTTCTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MYAIFYKEWIKTRWYFLLAVVTTLGFTGYCMLRINRVIEMKGAAHVWEVMMQRDAIFIDMLQYIPLIAGVLMAIVQFVPE MQRKCLKLTLHLPYPELKMTGNMLFSGLVLLLVCFASNFLLMEVYLSGVLAHELKNHILLTALTWYLAGISGYLLIAWIC LEPAWKRRIINLIIAVLLLRIFFLSPTPEAYNKFLPYLLVYTLLTASFSWLSIVRFKAGKQD
Sequences:
>Translated_222_residues MYAIFYKEWIKTRWYFLLAVVTTLGFTGYCMLRINRVIEMKGAAHVWEVMMQRDAIFIDMLQYIPLIAGVLMAIVQFVPE MQRKCLKLTLHLPYPELKMTGNMLFSGLVLLLVCFASNFLLMEVYLSGVLAHELKNHILLTALTWYLAGISGYLLIAWIC LEPAWKRRIINLIIAVLLLRIFFLSPTPEAYNKFLPYLLVYTLLTASFSWLSIVRFKAGKQD >Mature_222_residues MYAIFYKEWIKTRWYFLLAVVTTLGFTGYCMLRINRVIEMKGAAHVWEVMMQRDAIFIDMLQYIPLIAGVLMAIVQFVPE MQRKCLKLTLHLPYPELKMTGNMLFSGLVLLLVCFASNFLLMEVYLSGVLAHELKNHILLTALTWYLAGISGYLLIAWIC LEPAWKRRIINLIIAVLLLRIFFLSPTPEAYNKFLPYLLVYTLLTASFSWLSIVRFKAGKQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25774; Mature: 25774
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAIFYKEWIKTRWYFLLAVVTTLGFTGYCMLRINRVIEMKGAAHVWEVMMQRDAIFIDM CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LQYIPLIAGVLMAIVQFVPEMQRKCLKLTLHLPYPELKMTGNMLFSGLVLLLVCFASNFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH LMEVYLSGVLAHELKNHILLTALTWYLAGISGYLLIAWICLEPAWKRRIINLIIAVLLLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH IFFLSPTPEAYNKFLPYLLVYTLLTASFSWLSIVRFKAGKQD HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYAIFYKEWIKTRWYFLLAVVTTLGFTGYCMLRINRVIEMKGAAHVWEVMMQRDAIFIDM CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LQYIPLIAGVLMAIVQFVPEMQRKCLKLTLHLPYPELKMTGNMLFSGLVLLLVCFASNFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH LMEVYLSGVLAHELKNHILLTALTWYLAGISGYLLIAWICLEPAWKRRIINLIIAVLLLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH IFFLSPTPEAYNKFLPYLLVYTLLTASFSWLSIVRFKAGKQD HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA