| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349016
Identifier: 29349016
GI number: 29349016
Start: 4676457
End: 4677635
Strand: Reverse
Name: 29349016
Synonym: BT_3608
Alternate gene names: NA
Gene position: 4677635-4676457 (Counterclockwise)
Preceding gene: 29349017
Following gene: 29349015
Centisome position: 74.72
GC content: 43.26
Gene sequence:
>1179_bases ATGGAGCAAAAGAAAATCGTGCTATTCATCCTGATCACTCATCTGGCAGCATTTCTAGCAGGATGCAGCGGAAACAAAAA TAGCGGAAATAATGACTCCTCTGATCTATGGAATAAGTTATCGAGCTACTTCCGCCCGCCCGCAGAATACGAAAATGTAT ATGGGAATTTTCGCTCTCCTTTATTATATTATAATGGGGATACAGTCAGAACCGTTGAAGACTGGCAAAGACGACGAACT GAAATCAAGGACAGATGGATGAGCCTGTTAGGACAATGGCCGCCTGTCATTACCGGACAAACATTTGAAATTCTGGATAC TCTCCACCGTGAAAACTTCATGCAATACCGTGTCCGCTTCTACTGGACTCCCAACGAACAGACTGAAGGTTATTTGCTGG TTCCGGACAAAGAAGGCAAAAAGCCTGCCGTTATCACTACATTTTATGAACCCGAAACGGCTATCGGATTGGGTGGAAAA CCTTATAGAGACTTTGCATATCAATTGACGAAAAGAGGATTTGTCACATTATCAATAGGAACAACGAAGACCACAGAGAA TCAGACATATTCCATTTATTACCCCACCATTGAAAATGCAACTCTCCAACCACTTTCAGCATTAGCTTATGCAGCCGCAA ATGCATGGGAAGTATTAGCCAAAGTACAGGACGTCGATTCTACAAGAATAGGCATCACAGGGCATTCTTATGGTGGGAAG TGGGCAATGTTTGCCTCATGCCTATACGAAAAGTTCGCTTGTGCGGCATGGGGAGACCCCGGAATTGTATTCGACGAAAC AAAAGAGGGATATATCAATTACTGGGAACCCTGGTATTTGGGATATTATCCGCCACCATGGGAAAATACATGGAGCAAAA ATGGGCATGATTATGCTAAAGGCATTTATCCGAAGCTCCGCAAAGAAGGATATGATTTGCATGAATTGCATACGCTGATG GCACCTCGCCCATTTCTTGTTTCCGGAGGATACTCTGACGGAACAGACCGGTGGATAGCGCTAAACCATACAATAGCGGT CAACCGGCTCTTAGGATACCGTAATAATGTCGCGATGAGCAACAGAGTCAATCATGACCCAACCCCTGAATCAAACGAAA TTATATATGATTTTTTTAAATGGTACTTGCATTCAGCAAATAAATCTACCAAAGAGTAG
Upstream 100 bases:
>100_bases GTTTTTCGAATATAGCTTTTCGTTTTTAGTACCGGAGGCATTACTAAAGTGGCATATCTTTGTTCGGTAAATGTTAACTC TCAAAGTCAATCAACAACTT
Downstream 100 bases:
>100_bases AAAGATGCGTTTTTTGAATACACTTTTTCGTTTTTTTGCGCAAAAAATCAACTCTGGATGCCTAACTTTGTTCTATCAAT TCATCCAAGTAACCTAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MEQKKIVLFILITHLAAFLAGCSGNKNSGNNDSSDLWNKLSSYFRPPAEYENVYGNFRSPLLYYNGDTVRTVEDWQRRRT EIKDRWMSLLGQWPPVITGQTFEILDTLHRENFMQYRVRFYWTPNEQTEGYLLVPDKEGKKPAVITTFYEPETAIGLGGK PYRDFAYQLTKRGFVTLSIGTTKTTENQTYSIYYPTIENATLQPLSALAYAAANAWEVLAKVQDVDSTRIGITGHSYGGK WAMFASCLYEKFACAAWGDPGIVFDETKEGYINYWEPWYLGYYPPPWENTWSKNGHDYAKGIYPKLRKEGYDLHELHTLM APRPFLVSGGYSDGTDRWIALNHTIAVNRLLGYRNNVAMSNRVNHDPTPESNEIIYDFFKWYLHSANKSTKE
Sequences:
>Translated_392_residues MEQKKIVLFILITHLAAFLAGCSGNKNSGNNDSSDLWNKLSSYFRPPAEYENVYGNFRSPLLYYNGDTVRTVEDWQRRRT EIKDRWMSLLGQWPPVITGQTFEILDTLHRENFMQYRVRFYWTPNEQTEGYLLVPDKEGKKPAVITTFYEPETAIGLGGK PYRDFAYQLTKRGFVTLSIGTTKTTENQTYSIYYPTIENATLQPLSALAYAAANAWEVLAKVQDVDSTRIGITGHSYGGK WAMFASCLYEKFACAAWGDPGIVFDETKEGYINYWEPWYLGYYPPPWENTWSKNGHDYAKGIYPKLRKEGYDLHELHTLM APRPFLVSGGYSDGTDRWIALNHTIAVNRLLGYRNNVAMSNRVNHDPTPESNEIIYDFFKWYLHSANKSTKE >Mature_392_residues MEQKKIVLFILITHLAAFLAGCSGNKNSGNNDSSDLWNKLSSYFRPPAEYENVYGNFRSPLLYYNGDTVRTVEDWQRRRT EIKDRWMSLLGQWPPVITGQTFEILDTLHRENFMQYRVRFYWTPNEQTEGYLLVPDKEGKKPAVITTFYEPETAIGLGGK PYRDFAYQLTKRGFVTLSIGTTKTTENQTYSIYYPTIENATLQPLSALAYAAANAWEVLAKVQDVDSTRIGITGHSYGGK WAMFASCLYEKFACAAWGDPGIVFDETKEGYINYWEPWYLGYYPPPWENTWSKNGHDYAKGIYPKLRKEGYDLHELHTLM APRPFLVSGGYSDGTDRWIALNHTIAVNRLLGYRNNVAMSNRVNHDPTPESNEIIYDFFKWYLHSANKSTKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45220; Mature: 45220
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQKKIVLFILITHLAAFLAGCSGNKNSGNNDSSDLWNKLSSYFRPPAEYENVYGNFRSP CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCC LLYYNGDTVRTVEDWQRRRTEIKDRWMSLLGQWPPVITGQTFEILDTLHRENFMQYRVRF EEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEE YWTPNEQTEGYLLVPDKEGKKPAVITTFYEPETAIGLGGKPYRDFAYQLTKRGFVTLSIG EECCCCCCCCEEEEECCCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHCCEEEEEEC TTKTTENQTYSIYYPTIENATLQPLSALAYAAANAWEVLAKVQDVDSTRIGITGHSYGGK CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC WAMFASCLYEKFACAAWGDPGIVFDETKEGYINYWEPWYLGYYPPPWENTWSKNGHDYAK HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCCHHHH GIYPKLRKEGYDLHELHTLMAPRPFLVSGGYSDGTDRWIALNHTIAVNRLLGYRNNVAMS HCCHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEHHHHHCCCCCEEEC NRVNHDPTPESNEIIYDFFKWYLHSANKSTKE CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEQKKIVLFILITHLAAFLAGCSGNKNSGNNDSSDLWNKLSSYFRPPAEYENVYGNFRSP CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCC LLYYNGDTVRTVEDWQRRRTEIKDRWMSLLGQWPPVITGQTFEILDTLHRENFMQYRVRF EEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEE YWTPNEQTEGYLLVPDKEGKKPAVITTFYEPETAIGLGGKPYRDFAYQLTKRGFVTLSIG EECCCCCCCCEEEEECCCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHCCEEEEEEC TTKTTENQTYSIYYPTIENATLQPLSALAYAAANAWEVLAKVQDVDSTRIGITGHSYGGK CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC WAMFASCLYEKFACAAWGDPGIVFDETKEGYINYWEPWYLGYYPPPWENTWSKNGHDYAK HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCCHHHH GIYPKLRKEGYDLHELHTLMAPRPFLVSGGYSDGTDRWIALNHTIAVNRLLGYRNNVAMS HCCHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEHHHHHCCCCCEEEC NRVNHDPTPESNEIIYDFFKWYLHSANKSTKE CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA