Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349016

Identifier: 29349016

GI number: 29349016

Start: 4676457

End: 4677635

Strand: Reverse

Name: 29349016

Synonym: BT_3608

Alternate gene names: NA

Gene position: 4677635-4676457 (Counterclockwise)

Preceding gene: 29349017

Following gene: 29349015

Centisome position: 74.72

GC content: 43.26

Gene sequence:

>1179_bases
ATGGAGCAAAAGAAAATCGTGCTATTCATCCTGATCACTCATCTGGCAGCATTTCTAGCAGGATGCAGCGGAAACAAAAA
TAGCGGAAATAATGACTCCTCTGATCTATGGAATAAGTTATCGAGCTACTTCCGCCCGCCCGCAGAATACGAAAATGTAT
ATGGGAATTTTCGCTCTCCTTTATTATATTATAATGGGGATACAGTCAGAACCGTTGAAGACTGGCAAAGACGACGAACT
GAAATCAAGGACAGATGGATGAGCCTGTTAGGACAATGGCCGCCTGTCATTACCGGACAAACATTTGAAATTCTGGATAC
TCTCCACCGTGAAAACTTCATGCAATACCGTGTCCGCTTCTACTGGACTCCCAACGAACAGACTGAAGGTTATTTGCTGG
TTCCGGACAAAGAAGGCAAAAAGCCTGCCGTTATCACTACATTTTATGAACCCGAAACGGCTATCGGATTGGGTGGAAAA
CCTTATAGAGACTTTGCATATCAATTGACGAAAAGAGGATTTGTCACATTATCAATAGGAACAACGAAGACCACAGAGAA
TCAGACATATTCCATTTATTACCCCACCATTGAAAATGCAACTCTCCAACCACTTTCAGCATTAGCTTATGCAGCCGCAA
ATGCATGGGAAGTATTAGCCAAAGTACAGGACGTCGATTCTACAAGAATAGGCATCACAGGGCATTCTTATGGTGGGAAG
TGGGCAATGTTTGCCTCATGCCTATACGAAAAGTTCGCTTGTGCGGCATGGGGAGACCCCGGAATTGTATTCGACGAAAC
AAAAGAGGGATATATCAATTACTGGGAACCCTGGTATTTGGGATATTATCCGCCACCATGGGAAAATACATGGAGCAAAA
ATGGGCATGATTATGCTAAAGGCATTTATCCGAAGCTCCGCAAAGAAGGATATGATTTGCATGAATTGCATACGCTGATG
GCACCTCGCCCATTTCTTGTTTCCGGAGGATACTCTGACGGAACAGACCGGTGGATAGCGCTAAACCATACAATAGCGGT
CAACCGGCTCTTAGGATACCGTAATAATGTCGCGATGAGCAACAGAGTCAATCATGACCCAACCCCTGAATCAAACGAAA
TTATATATGATTTTTTTAAATGGTACTTGCATTCAGCAAATAAATCTACCAAAGAGTAG

Upstream 100 bases:

>100_bases
GTTTTTCGAATATAGCTTTTCGTTTTTAGTACCGGAGGCATTACTAAAGTGGCATATCTTTGTTCGGTAAATGTTAACTC
TCAAAGTCAATCAACAACTT

Downstream 100 bases:

>100_bases
AAAGATGCGTTTTTTGAATACACTTTTTCGTTTTTTTGCGCAAAAAATCAACTCTGGATGCCTAACTTTGTTCTATCAAT
TCATCCAAGTAACCTAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MEQKKIVLFILITHLAAFLAGCSGNKNSGNNDSSDLWNKLSSYFRPPAEYENVYGNFRSPLLYYNGDTVRTVEDWQRRRT
EIKDRWMSLLGQWPPVITGQTFEILDTLHRENFMQYRVRFYWTPNEQTEGYLLVPDKEGKKPAVITTFYEPETAIGLGGK
PYRDFAYQLTKRGFVTLSIGTTKTTENQTYSIYYPTIENATLQPLSALAYAAANAWEVLAKVQDVDSTRIGITGHSYGGK
WAMFASCLYEKFACAAWGDPGIVFDETKEGYINYWEPWYLGYYPPPWENTWSKNGHDYAKGIYPKLRKEGYDLHELHTLM
APRPFLVSGGYSDGTDRWIALNHTIAVNRLLGYRNNVAMSNRVNHDPTPESNEIIYDFFKWYLHSANKSTKE

Sequences:

>Translated_392_residues
MEQKKIVLFILITHLAAFLAGCSGNKNSGNNDSSDLWNKLSSYFRPPAEYENVYGNFRSPLLYYNGDTVRTVEDWQRRRT
EIKDRWMSLLGQWPPVITGQTFEILDTLHRENFMQYRVRFYWTPNEQTEGYLLVPDKEGKKPAVITTFYEPETAIGLGGK
PYRDFAYQLTKRGFVTLSIGTTKTTENQTYSIYYPTIENATLQPLSALAYAAANAWEVLAKVQDVDSTRIGITGHSYGGK
WAMFASCLYEKFACAAWGDPGIVFDETKEGYINYWEPWYLGYYPPPWENTWSKNGHDYAKGIYPKLRKEGYDLHELHTLM
APRPFLVSGGYSDGTDRWIALNHTIAVNRLLGYRNNVAMSNRVNHDPTPESNEIIYDFFKWYLHSANKSTKE
>Mature_392_residues
MEQKKIVLFILITHLAAFLAGCSGNKNSGNNDSSDLWNKLSSYFRPPAEYENVYGNFRSPLLYYNGDTVRTVEDWQRRRT
EIKDRWMSLLGQWPPVITGQTFEILDTLHRENFMQYRVRFYWTPNEQTEGYLLVPDKEGKKPAVITTFYEPETAIGLGGK
PYRDFAYQLTKRGFVTLSIGTTKTTENQTYSIYYPTIENATLQPLSALAYAAANAWEVLAKVQDVDSTRIGITGHSYGGK
WAMFASCLYEKFACAAWGDPGIVFDETKEGYINYWEPWYLGYYPPPWENTWSKNGHDYAKGIYPKLRKEGYDLHELHTLM
APRPFLVSGGYSDGTDRWIALNHTIAVNRLLGYRNNVAMSNRVNHDPTPESNEIIYDFFKWYLHSANKSTKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45220; Mature: 45220

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKKIVLFILITHLAAFLAGCSGNKNSGNNDSSDLWNKLSSYFRPPAEYENVYGNFRSP
CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCC
LLYYNGDTVRTVEDWQRRRTEIKDRWMSLLGQWPPVITGQTFEILDTLHRENFMQYRVRF
EEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEE
YWTPNEQTEGYLLVPDKEGKKPAVITTFYEPETAIGLGGKPYRDFAYQLTKRGFVTLSIG
EECCCCCCCCEEEEECCCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHCCEEEEEEC
TTKTTENQTYSIYYPTIENATLQPLSALAYAAANAWEVLAKVQDVDSTRIGITGHSYGGK
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
WAMFASCLYEKFACAAWGDPGIVFDETKEGYINYWEPWYLGYYPPPWENTWSKNGHDYAK
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCCHHHH
GIYPKLRKEGYDLHELHTLMAPRPFLVSGGYSDGTDRWIALNHTIAVNRLLGYRNNVAMS
HCCHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEHHHHHCCCCCEEEC
NRVNHDPTPESNEIIYDFFKWYLHSANKSTKE
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEQKKIVLFILITHLAAFLAGCSGNKNSGNNDSSDLWNKLSSYFRPPAEYENVYGNFRSP
CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCC
LLYYNGDTVRTVEDWQRRRTEIKDRWMSLLGQWPPVITGQTFEILDTLHRENFMQYRVRF
EEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEE
YWTPNEQTEGYLLVPDKEGKKPAVITTFYEPETAIGLGGKPYRDFAYQLTKRGFVTLSIG
EECCCCCCCCEEEEECCCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHCCEEEEEEC
TTKTTENQTYSIYYPTIENATLQPLSALAYAAANAWEVLAKVQDVDSTRIGITGHSYGGK
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
WAMFASCLYEKFACAAWGDPGIVFDETKEGYINYWEPWYLGYYPPPWENTWSKNGHDYAK
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCCHHHH
GIYPKLRKEGYDLHELHTLMAPRPFLVSGGYSDGTDRWIALNHTIAVNRLLGYRNNVAMS
HCCHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEHHHHHCCCCCEEEC
NRVNHDPTPESNEIIYDFFKWYLHSANKSTKE
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA