Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349015

Identifier: 29349015

GI number: 29349015

Start: 4674973

End: 4676070

Strand: Reverse

Name: 29349015

Synonym: BT_3607

Alternate gene names: NA

Gene position: 4676070-4674973 (Counterclockwise)

Preceding gene: 29349016

Following gene: 29349014

Centisome position: 74.69

GC content: 41.71

Gene sequence:

>1098_bases
ATGGAAGCGAATAATCGCAGAGATTTCTTAAAGAAAGCCGCATTAGCGGGAGCCTCCGCCCTAATGGCTCCCACACTACT
GGCCGCTGAAGGCAAAGATGGAAGTGAATTCGTTCTCTCTCCGAGCAAAAGGACGGACAGCAAATTAATTGTACCGAAGA
ATAATGGTCTGAAAATCACAGGCACTTTTCTAGATGAAATATCTCACGATATTCCACACCAGAACTGGGGAGAAAAAGAA
TGGGATCTCGACTTTCAGCACATGAAAAGGATTGGTATCGATACCGTTATTATGATCCGTTCCGGATATCGCAAGTTCAT
CACTTATCCGTCCAAATATCTATTAGGAAAAGGATGCTATATGCCTTCCGTGGATTTAGTAGATATGTACTTACGACTGG
CTGAAAAATATAACATGAAGTTTTATTTTGGGCTGTATGACACCGGTCATTATTGGGATACACGTGATATGTCGTGGGAA
GTGGAATATAATAAATATGTGATTGACGAAGTATGGAATACTTACGGTGAAAAGTATAAGAGTTTCGGAGGCTGGTATAT
TAGCACGGAAATCAGCCGCAATACCAAAGGAGCTATCGGTGCATTTCATACCATGGGTAAACAATGCAAAGATGTATCGA
ATGGCCTCCCTACTTTTATATCCCCTTGGATTGATGGTAAAAAGGCAGTCATGGGAACCGGAAAAATGACAAGGGAGGAT
GCTGTATCCGTAGAACAACATGAGAGAGAATGGAATGAAATTTTTGATGGTATACACGATGTAGTAGACGCTTGTGCTTT
TCAAGACGGACACATTGACTACGACGAACTGGATGCTTTTTTCACTGTAAACAAGAAACTGGCAGACAAATACGGAATGC
AATGTTGGACAAACGCGGAAACATTCGACCGCGATATGCCCATCCGGTTCCTGCCGATCAAATTCGACAAACTCCGCATG
AAACTGGAAGCGGCAAAACGTGCCGGATATGATAAAGCAATCACTTTTGAGTTTTCTCACTTTTTAAGTCCGCAATCAGC
TTATCTGCAGGCAGGACATTTATATGACAGATACAGAGAATACTTTGAAATCAAATAA

Upstream 100 bases:

>100_bases
AGCTAGCAGATGATTCCGAGTTAGTAATAAATATTAAACTATTAAAAATTCAATAGGTTAAATATATACTAAAAAGAGTA
GAAACTAAAAAAAGTAAACT

Downstream 100 bases:

>100_bases
ACTATATGAAAACAACAATTAATCTGGGTTATATCATATTCCTTTCAGTCGTTGCTGCTTTAGGAGGCTTTCTGTTCGGT
TATGACACAGCTGTCATATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MEANNRRDFLKKAALAGASALMAPTLLAAEGKDGSEFVLSPSKRTDSKLIVPKNNGLKITGTFLDEISHDIPHQNWGEKE
WDLDFQHMKRIGIDTVIMIRSGYRKFITYPSKYLLGKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDTGHYWDTRDMSWE
VEYNKYVIDEVWNTYGEKYKSFGGWYISTEISRNTKGAIGAFHTMGKQCKDVSNGLPTFISPWIDGKKAVMGTGKMTRED
AVSVEQHEREWNEIFDGIHDVVDACAFQDGHIDYDELDAFFTVNKKLADKYGMQCWTNAETFDRDMPIRFLPIKFDKLRM
KLEAAKRAGYDKAITFEFSHFLSPQSAYLQAGHLYDRYREYFEIK

Sequences:

>Translated_365_residues
MEANNRRDFLKKAALAGASALMAPTLLAAEGKDGSEFVLSPSKRTDSKLIVPKNNGLKITGTFLDEISHDIPHQNWGEKE
WDLDFQHMKRIGIDTVIMIRSGYRKFITYPSKYLLGKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDTGHYWDTRDMSWE
VEYNKYVIDEVWNTYGEKYKSFGGWYISTEISRNTKGAIGAFHTMGKQCKDVSNGLPTFISPWIDGKKAVMGTGKMTRED
AVSVEQHEREWNEIFDGIHDVVDACAFQDGHIDYDELDAFFTVNKKLADKYGMQCWTNAETFDRDMPIRFLPIKFDKLRM
KLEAAKRAGYDKAITFEFSHFLSPQSAYLQAGHLYDRYREYFEIK
>Mature_365_residues
MEANNRRDFLKKAALAGASALMAPTLLAAEGKDGSEFVLSPSKRTDSKLIVPKNNGLKITGTFLDEISHDIPHQNWGEKE
WDLDFQHMKRIGIDTVIMIRSGYRKFITYPSKYLLGKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDTGHYWDTRDMSWE
VEYNKYVIDEVWNTYGEKYKSFGGWYISTEISRNTKGAIGAFHTMGKQCKDVSNGLPTFISPWIDGKKAVMGTGKMTRED
AVSVEQHEREWNEIFDGIHDVVDACAFQDGHIDYDELDAFFTVNKKLADKYGMQCWTNAETFDRDMPIRFLPIKFDKLRM
KLEAAKRAGYDKAITFEFSHFLSPQSAYLQAGHLYDRYREYFEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42286; Mature: 42286

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEANNRRDFLKKAALAGASALMAPTLLAAEGKDGSEFVLSPSKRTDSKLIVPKNNGLKIT
CCCCCHHHHHHHHHHHCHHHHHHHHHEEECCCCCCCEEECCCCCCCCEEEEECCCCEEEE
GTFLDEISHDIPHQNWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFITYPSKYLLGKGCY
EHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHHCCCCHHHHCCCCC
MPSVDLVDMYLRLAEKYNMKFYFGLYDTGHYWDTRDMSWEVEYNKYVIDEVWNTYGEKYK
CCCHHHHHHHHHHHHHCCCEEEEEEECCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHH
SFGGWYISTEISRNTKGAIGAFHTMGKQCKDVSNGLPTFISPWIDGKKAVMGTGKMTRED
HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCCHHH
AVSVEQHEREWNEIFDGIHDVVDACAFQDGHIDYDELDAFFTVNKKLADKYGMQCWTNAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEHHHHHHHHHCCEEECCCH
TFDRDMPIRFLPIKFDKLRMKLEAAKRAGYDKAITFEFSHFLSPQSAYLQAGHLYDRYRE
HCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHH
YFEIK
HHCCC
>Mature Secondary Structure
MEANNRRDFLKKAALAGASALMAPTLLAAEGKDGSEFVLSPSKRTDSKLIVPKNNGLKIT
CCCCCHHHHHHHHHHHCHHHHHHHHHEEECCCCCCCEEECCCCCCCCEEEEECCCCEEEE
GTFLDEISHDIPHQNWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFITYPSKYLLGKGCY
EHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHHCCCCHHHHCCCCC
MPSVDLVDMYLRLAEKYNMKFYFGLYDTGHYWDTRDMSWEVEYNKYVIDEVWNTYGEKYK
CCCHHHHHHHHHHHHHCCCEEEEEEECCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHH
SFGGWYISTEISRNTKGAIGAFHTMGKQCKDVSNGLPTFISPWIDGKKAVMGTGKMTRED
HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCCHHH
AVSVEQHEREWNEIFDGIHDVVDACAFQDGHIDYDELDAFFTVNKKLADKYGMQCWTNAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEHHHHHHHHHCCEEECCCH
TFDRDMPIRFLPIKFDKLRMKLEAAKRAGYDKAITFEFSHFLSPQSAYLQAGHLYDRYRE
HCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHH
YFEIK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA