| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29349015
Identifier: 29349015
GI number: 29349015
Start: 4674973
End: 4676070
Strand: Reverse
Name: 29349015
Synonym: BT_3607
Alternate gene names: NA
Gene position: 4676070-4674973 (Counterclockwise)
Preceding gene: 29349016
Following gene: 29349014
Centisome position: 74.69
GC content: 41.71
Gene sequence:
>1098_bases ATGGAAGCGAATAATCGCAGAGATTTCTTAAAGAAAGCCGCATTAGCGGGAGCCTCCGCCCTAATGGCTCCCACACTACT GGCCGCTGAAGGCAAAGATGGAAGTGAATTCGTTCTCTCTCCGAGCAAAAGGACGGACAGCAAATTAATTGTACCGAAGA ATAATGGTCTGAAAATCACAGGCACTTTTCTAGATGAAATATCTCACGATATTCCACACCAGAACTGGGGAGAAAAAGAA TGGGATCTCGACTTTCAGCACATGAAAAGGATTGGTATCGATACCGTTATTATGATCCGTTCCGGATATCGCAAGTTCAT CACTTATCCGTCCAAATATCTATTAGGAAAAGGATGCTATATGCCTTCCGTGGATTTAGTAGATATGTACTTACGACTGG CTGAAAAATATAACATGAAGTTTTATTTTGGGCTGTATGACACCGGTCATTATTGGGATACACGTGATATGTCGTGGGAA GTGGAATATAATAAATATGTGATTGACGAAGTATGGAATACTTACGGTGAAAAGTATAAGAGTTTCGGAGGCTGGTATAT TAGCACGGAAATCAGCCGCAATACCAAAGGAGCTATCGGTGCATTTCATACCATGGGTAAACAATGCAAAGATGTATCGA ATGGCCTCCCTACTTTTATATCCCCTTGGATTGATGGTAAAAAGGCAGTCATGGGAACCGGAAAAATGACAAGGGAGGAT GCTGTATCCGTAGAACAACATGAGAGAGAATGGAATGAAATTTTTGATGGTATACACGATGTAGTAGACGCTTGTGCTTT TCAAGACGGACACATTGACTACGACGAACTGGATGCTTTTTTCACTGTAAACAAGAAACTGGCAGACAAATACGGAATGC AATGTTGGACAAACGCGGAAACATTCGACCGCGATATGCCCATCCGGTTCCTGCCGATCAAATTCGACAAACTCCGCATG AAACTGGAAGCGGCAAAACGTGCCGGATATGATAAAGCAATCACTTTTGAGTTTTCTCACTTTTTAAGTCCGCAATCAGC TTATCTGCAGGCAGGACATTTATATGACAGATACAGAGAATACTTTGAAATCAAATAA
Upstream 100 bases:
>100_bases AGCTAGCAGATGATTCCGAGTTAGTAATAAATATTAAACTATTAAAAATTCAATAGGTTAAATATATACTAAAAAGAGTA GAAACTAAAAAAAGTAAACT
Downstream 100 bases:
>100_bases ACTATATGAAAACAACAATTAATCTGGGTTATATCATATTCCTTTCAGTCGTTGCTGCTTTAGGAGGCTTTCTGTTCGGT TATGACACAGCTGTCATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MEANNRRDFLKKAALAGASALMAPTLLAAEGKDGSEFVLSPSKRTDSKLIVPKNNGLKITGTFLDEISHDIPHQNWGEKE WDLDFQHMKRIGIDTVIMIRSGYRKFITYPSKYLLGKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDTGHYWDTRDMSWE VEYNKYVIDEVWNTYGEKYKSFGGWYISTEISRNTKGAIGAFHTMGKQCKDVSNGLPTFISPWIDGKKAVMGTGKMTRED AVSVEQHEREWNEIFDGIHDVVDACAFQDGHIDYDELDAFFTVNKKLADKYGMQCWTNAETFDRDMPIRFLPIKFDKLRM KLEAAKRAGYDKAITFEFSHFLSPQSAYLQAGHLYDRYREYFEIK
Sequences:
>Translated_365_residues MEANNRRDFLKKAALAGASALMAPTLLAAEGKDGSEFVLSPSKRTDSKLIVPKNNGLKITGTFLDEISHDIPHQNWGEKE WDLDFQHMKRIGIDTVIMIRSGYRKFITYPSKYLLGKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDTGHYWDTRDMSWE VEYNKYVIDEVWNTYGEKYKSFGGWYISTEISRNTKGAIGAFHTMGKQCKDVSNGLPTFISPWIDGKKAVMGTGKMTRED AVSVEQHEREWNEIFDGIHDVVDACAFQDGHIDYDELDAFFTVNKKLADKYGMQCWTNAETFDRDMPIRFLPIKFDKLRM KLEAAKRAGYDKAITFEFSHFLSPQSAYLQAGHLYDRYREYFEIK >Mature_365_residues MEANNRRDFLKKAALAGASALMAPTLLAAEGKDGSEFVLSPSKRTDSKLIVPKNNGLKITGTFLDEISHDIPHQNWGEKE WDLDFQHMKRIGIDTVIMIRSGYRKFITYPSKYLLGKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDTGHYWDTRDMSWE VEYNKYVIDEVWNTYGEKYKSFGGWYISTEISRNTKGAIGAFHTMGKQCKDVSNGLPTFISPWIDGKKAVMGTGKMTRED AVSVEQHEREWNEIFDGIHDVVDACAFQDGHIDYDELDAFFTVNKKLADKYGMQCWTNAETFDRDMPIRFLPIKFDKLRM KLEAAKRAGYDKAITFEFSHFLSPQSAYLQAGHLYDRYREYFEIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42286; Mature: 42286
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEANNRRDFLKKAALAGASALMAPTLLAAEGKDGSEFVLSPSKRTDSKLIVPKNNGLKIT CCCCCHHHHHHHHHHHCHHHHHHHHHEEECCCCCCCEEECCCCCCCCEEEEECCCCEEEE GTFLDEISHDIPHQNWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFITYPSKYLLGKGCY EHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHHCCCCHHHHCCCCC MPSVDLVDMYLRLAEKYNMKFYFGLYDTGHYWDTRDMSWEVEYNKYVIDEVWNTYGEKYK CCCHHHHHHHHHHHHHCCCEEEEEEECCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHH SFGGWYISTEISRNTKGAIGAFHTMGKQCKDVSNGLPTFISPWIDGKKAVMGTGKMTRED HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCCHHH AVSVEQHEREWNEIFDGIHDVVDACAFQDGHIDYDELDAFFTVNKKLADKYGMQCWTNAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEHHHHHHHHHCCEEECCCH TFDRDMPIRFLPIKFDKLRMKLEAAKRAGYDKAITFEFSHFLSPQSAYLQAGHLYDRYRE HCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHH YFEIK HHCCC >Mature Secondary Structure MEANNRRDFLKKAALAGASALMAPTLLAAEGKDGSEFVLSPSKRTDSKLIVPKNNGLKIT CCCCCHHHHHHHHHHHCHHHHHHHHHEEECCCCCCCEEECCCCCCCCEEEEECCCCEEEE GTFLDEISHDIPHQNWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFITYPSKYLLGKGCY EHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHHCCCCHHHHCCCCC MPSVDLVDMYLRLAEKYNMKFYFGLYDTGHYWDTRDMSWEVEYNKYVIDEVWNTYGEKYK CCCHHHHHHHHHHHHHCCCEEEEEEECCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHH SFGGWYISTEISRNTKGAIGAFHTMGKQCKDVSNGLPTFISPWIDGKKAVMGTGKMTRED HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCCHHH AVSVEQHEREWNEIFDGIHDVVDACAFQDGHIDYDELDAFFTVNKKLADKYGMQCWTNAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEHHHHHHHHHCCEEECCCH TFDRDMPIRFLPIKFDKLRMKLEAAKRAGYDKAITFEFSHFLSPQSAYLQAGHLYDRYRE HCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHH YFEIK HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA