| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349001
Identifier: 29349001
GI number: 29349001
Start: 4650523
End: 4651599
Strand: Reverse
Name: 29349001
Synonym: BT_3593
Alternate gene names: NA
Gene position: 4651599-4650523 (Counterclockwise)
Preceding gene: 29349002
Following gene: 29349000
Centisome position: 74.3
GC content: 39.28
Gene sequence:
>1077_bases ATGAAAAGACATATCATCATTTTGCTCATTACATTCTTGTGCTTGCCGGAATATCTGGAAGCTCAATTAAAATATTATGA TGCTGCCAAGTTTCCATTGTATGGTAAAGCCACAAAGAATACAGAAAATCGCTACGAACGATTGCCGGATTCATTAAAGC ATGTCTCTCGTAAACCGGTATGGAATTTAAGCAGAAACTCCGCAGGATTAGCAATCAGATTTTGCTCCAATTCAACAACA ATAGCCACCAAATGGGAGAATTTGAATAATAACCTGATGAATCATATGACACCTACCGGTACTAAAGGACTCGATCTATA CACATGGGTAGACGGAGCATGGAGATTTGTGAATAGTGGGCGCCCCACCGGAAAAGTGAATCAAGCTACAATTATAGCAA ATATGGAACCGGTCGAGCGAGAATATATGCTATATTTACCTCTTTATGATGGAGTAATTTCATTGTCCATCGGAATAGAC GCAGAAGCATCTATATCAGTACCTCGAACGGCAATTCCAGTACGGACTAAACCAATCGTTTTTTATGGAACAAGCATTCT TCAAGGTGGCTGTGCCAATCGTCCTGGGATGGCACATACCAATATTATTTCCCGCCGTCTCAATCGAGAAATCGTCAATT TGGGATTCAGTGGAAATGCACTTTTAGACTACGAAATAGCCGAAGTAATGTCCTCAGTAGATGCAGGAGTGTATGTACTA GACTTCGTCCCTAATGCTTCCTCCGATCAGATATATGAGAAGATGGAAACCTTCTATCGCATACTTCGGGATAAGCATCC ACGCACTCCGATTATATTTATTGAGGACCCCGTATTCACTCATGCTCTGTTCGACAAGAAAATAGCTATCGAAATAAACA AAAAGAATAAAGCCGTCAACAGTGTCTTCAAATCTCTAAAAACAAAAGGTGAAAAGAATATATACATAATTTCTTCCGAA AAGATGCTTGGAGAAGATGGAGAAGCAACAGTAGACGGTATTCATTTCACAGACTTAGGAATGATGAGATATGCAGACCT TGTTTGTCCGGTTATAAAGAAAGTATTAAAAAAATAA
Upstream 100 bases:
>100_bases AAAAATTAGCCCAATCCGGATATTCATAAAAGCTATAGCAATATACATAGTAAGTTTCTTTTTATGTATATTGCATTGCT TTTATAAACAACCATTTATT
Downstream 100 bases:
>100_bases TTTACTATGCAGTACATTAAGCAGATAATGTTATTGGTTATACTAACGATTAGTTGGAAATGCCAGGCAGAAGAAGTAAA AGAAATTTGGCTGGACGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKRHIIILLITFLCLPEYLEAQLKYYDAAKFPLYGKATKNTENRYERLPDSLKHVSRKPVWNLSRNSAGLAIRFCSNSTT IATKWENLNNNLMNHMTPTGTKGLDLYTWVDGAWRFVNSGRPTGKVNQATIIANMEPVEREYMLYLPLYDGVISLSIGID AEASISVPRTAIPVRTKPIVFYGTSILQGGCANRPGMAHTNIISRRLNREIVNLGFSGNALLDYEIAEVMSSVDAGVYVL DFVPNASSDQIYEKMETFYRILRDKHPRTPIIFIEDPVFTHALFDKKIAIEINKKNKAVNSVFKSLKTKGEKNIYIISSE KMLGEDGEATVDGIHFTDLGMMRYADLVCPVIKKVLKK
Sequences:
>Translated_358_residues MKRHIIILLITFLCLPEYLEAQLKYYDAAKFPLYGKATKNTENRYERLPDSLKHVSRKPVWNLSRNSAGLAIRFCSNSTT IATKWENLNNNLMNHMTPTGTKGLDLYTWVDGAWRFVNSGRPTGKVNQATIIANMEPVEREYMLYLPLYDGVISLSIGID AEASISVPRTAIPVRTKPIVFYGTSILQGGCANRPGMAHTNIISRRLNREIVNLGFSGNALLDYEIAEVMSSVDAGVYVL DFVPNASSDQIYEKMETFYRILRDKHPRTPIIFIEDPVFTHALFDKKIAIEINKKNKAVNSVFKSLKTKGEKNIYIISSE KMLGEDGEATVDGIHFTDLGMMRYADLVCPVIKKVLKK >Mature_358_residues MKRHIIILLITFLCLPEYLEAQLKYYDAAKFPLYGKATKNTENRYERLPDSLKHVSRKPVWNLSRNSAGLAIRFCSNSTT IATKWENLNNNLMNHMTPTGTKGLDLYTWVDGAWRFVNSGRPTGKVNQATIIANMEPVEREYMLYLPLYDGVISLSIGID AEASISVPRTAIPVRTKPIVFYGTSILQGGCANRPGMAHTNIISRRLNREIVNLGFSGNALLDYEIAEVMSSVDAGVYVL DFVPNASSDQIYEKMETFYRILRDKHPRTPIIFIEDPVFTHALFDKKIAIEINKKNKAVNSVFKSLKTKGEKNIYIISSE KMLGEDGEATVDGIHFTDLGMMRYADLVCPVIKKVLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40424; Mature: 40424
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHIIILLITFLCLPEYLEAQLKYYDAAKFPLYGKATKNTENRYERLPDSLKHVSRKPV CCCEEEHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCC WNLSRNSAGLAIRFCSNSTTIATKWENLNNNLMNHMTPTGTKGLDLYTWVDGAWRFVNSG CCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEEEECCHHHHHCCC RPTGKVNQATIIANMEPVEREYMLYLPLYDGVISLSIGIDAEASISVPRTAIPVRTKPIV CCCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE FYGTSILQGGCANRPGMAHTNIISRRLNREIVNLGFSGNALLDYEIAEVMSSVDAGVYVL EECHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHCCCCEEEE DFVPNASSDQIYEKMETFYRILRDKHPRTPIIFIEDPVFTHALFDKKIAIEINKKNKAVN EECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHCCEEEEEECCCHHHHH SVFKSLKTKGEKNIYIISSEKMLGEDGEATVDGIHFTDLGMMRYADLVCPVIKKVLKK HHHHHHHCCCCCCEEEEECCHHCCCCCCCEECCEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRHIIILLITFLCLPEYLEAQLKYYDAAKFPLYGKATKNTENRYERLPDSLKHVSRKPV CCCEEEHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCC WNLSRNSAGLAIRFCSNSTTIATKWENLNNNLMNHMTPTGTKGLDLYTWVDGAWRFVNSG CCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEEEECCHHHHHCCC RPTGKVNQATIIANMEPVEREYMLYLPLYDGVISLSIGIDAEASISVPRTAIPVRTKPIV CCCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE FYGTSILQGGCANRPGMAHTNIISRRLNREIVNLGFSGNALLDYEIAEVMSSVDAGVYVL EECHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHCCCCEEEE DFVPNASSDQIYEKMETFYRILRDKHPRTPIIFIEDPVFTHALFDKKIAIEINKKNKAVN EECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHCCEEEEEECCCHHHHH SVFKSLKTKGEKNIYIISSEKMLGEDGEATVDGIHFTDLGMMRYADLVCPVIKKVLKK HHHHHHHCCCCCCEEEEECCHHCCCCCCCEECCEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA