| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348994
Identifier: 29348994
GI number: 29348994
Start: 4640662
End: 4641666
Strand: Reverse
Name: 29348994
Synonym: BT_3586
Alternate gene names: NA
Gene position: 4641666-4640662 (Counterclockwise)
Preceding gene: 29348995
Following gene: 29348993
Centisome position: 74.14
GC content: 42.59
Gene sequence:
>1005_bases ATGAAAAATATCTTATTTATCCTCCTTACTTTCTTGTCTGTCAGCTTCAGACTATATGCGCAGGATGTAATTAAAATAGG AATTATCGGGCTCGATACTTCCCATTCTACAGCTTTCACCGAGCTACTGAACGGAGACTCTGACGATAAGTTTGTCAAAG AGTTCGAAGTCGTAGCAGCTTACCCTTATGGTTCAAAGACTATCCAGTCCAGTTACGAACGAATTCCCGGATATATAGAA GAGGTCAAGAAACACGGTGTGGAGATTACATCTTCCATAGCGGAATTGCTTGACAAGGTAGATTGCGTCATGCTTGAAAC AAACGACGGTAGAATCCACCTCGAACAAGCAATGGAAGTATTCAAATCCGGAAAAATATGCTATATCGACAAGCCTATTG GAGCGACATTGGGACAAGCTATTGCCATTTACGAAATGGCGGAGAAATACAATGTGCCTATCTTTTCTTCTTCTGCACTC AGATATTCTCCACAGAATCAAAAGCTGAGAAACGGAGAGTTCGGCAAAATTCTGGGAGCTGACTGTTATTCTCCTCACAA GGTAGAACCGACTCACCCCGATTTCGGTTTTTATGGCATTCACGGAGTAGAAACGCTTTATACTCTTATGGGAACCGGTT GCGAGTCAGTCAACCGTATGTCTTCCCAAGATGCTGATGTAGTGGTAGGCCGTTGGAAAGACGGGCGGATAGGTACTTTC AGGGGAATCAAAGAAGGTCCGGCCATTTATGGCGGTACAGCTTATACCCCCAAAGGTGCAATAGCAGCAGGAGGATATGA AGGTTACAAAGTTTTGCTCGATCAAATACTCACTTTTTTCAAGACCGGAGTAGCTCCGATTTCGAAAGAAGAAACAATTG AGATATTCACTTTTATGAAAGCTTCCAATATGAGCAAAGAACAGAATGGCAAAATCGTTACCATGGAGGAGGCATACCGA AAAGGGCTGAAAGATGCACAGAAGCTAATTAAAACCTACAAATAA
Upstream 100 bases:
>100_bases AATTTCCGAAAAATGTCCGGCCAGTATATTACGCAAAAAAGAAAATTCTTGTTTATATTTGGATCCTGAAAGTGCAGAAC GAATAAACTTATAAATACAT
Downstream 100 bases:
>100_bases AAATAGCACATGAGGTACACATACAGACACATCGGGATCCTGACCATCTCATTAATAGTTGCTTCCTGCTCTTTTTCCCA AAAGCAGGCAGACAACAATC
Product: putative dehydrogenase
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; Oxidoreductase; Dehydrogenase
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKNILFILLTFLSVSFRLYAQDVIKIGIIGLDTSHSTAFTELLNGDSDDKFVKEFEVVAAYPYGSKTIQSSYERIPGYIE EVKKHGVEITSSIAELLDKVDCVMLETNDGRIHLEQAMEVFKSGKICYIDKPIGATLGQAIAIYEMAEKYNVPIFSSSAL RYSPQNQKLRNGEFGKILGADCYSPHKVEPTHPDFGFYGIHGVETLYTLMGTGCESVNRMSSQDADVVVGRWKDGRIGTF RGIKEGPAIYGGTAYTPKGAIAAGGYEGYKVLLDQILTFFKTGVAPISKEETIEIFTFMKASNMSKEQNGKIVTMEEAYR KGLKDAQKLIKTYK
Sequences:
>Translated_334_residues MKNILFILLTFLSVSFRLYAQDVIKIGIIGLDTSHSTAFTELLNGDSDDKFVKEFEVVAAYPYGSKTIQSSYERIPGYIE EVKKHGVEITSSIAELLDKVDCVMLETNDGRIHLEQAMEVFKSGKICYIDKPIGATLGQAIAIYEMAEKYNVPIFSSSAL RYSPQNQKLRNGEFGKILGADCYSPHKVEPTHPDFGFYGIHGVETLYTLMGTGCESVNRMSSQDADVVVGRWKDGRIGTF RGIKEGPAIYGGTAYTPKGAIAAGGYEGYKVLLDQILTFFKTGVAPISKEETIEIFTFMKASNMSKEQNGKIVTMEEAYR KGLKDAQKLIKTYK >Mature_334_residues MKNILFILLTFLSVSFRLYAQDVIKIGIIGLDTSHSTAFTELLNGDSDDKFVKEFEVVAAYPYGSKTIQSSYERIPGYIE EVKKHGVEITSSIAELLDKVDCVMLETNDGRIHLEQAMEVFKSGKICYIDKPIGATLGQAIAIYEMAEKYNVPIFSSSAL RYSPQNQKLRNGEFGKILGADCYSPHKVEPTHPDFGFYGIHGVETLYTLMGTGCESVNRMSSQDADVVVGRWKDGRIGTF RGIKEGPAIYGGTAYTPKGAIAAGGYEGYKVLLDQILTFFKTGVAPISKEETIEIFTFMKASNMSKEQNGKIVTMEEAYR KGLKDAQKLIKTYK
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37046; Mature: 37046
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILFILLTFLSVSFRLYAQDVIKIGIIGLDTSHSTAFTELLNGDSDDKFVKEFEVVAA CCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHEEEEE YPYGSKTIQSSYERIPGYIEEVKKHGVEITSSIAELLDKVDCVMLETNDGRIHLEQAMEV CCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHH FKSGKICYIDKPIGATLGQAIAIYEMAEKYNVPIFSSSALRYSPQNQKLRNGEFGKILGA HHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCCCCCEECC DCYSPHKVEPTHPDFGFYGIHGVETLYTLMGTGCESVNRMSSQDADVVVGRWKDGRIGTF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCCC RGIKEGPAIYGGTAYTPKGAIAAGGYEGYKVLLDQILTFFKTGVAPISKEETIEIFTFMK CCCCCCCCEECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHH ASNMSKEQNGKIVTMEEAYRKGLKDAQKLIKTYK HCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNILFILLTFLSVSFRLYAQDVIKIGIIGLDTSHSTAFTELLNGDSDDKFVKEFEVVAA CCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHEEEEE YPYGSKTIQSSYERIPGYIEEVKKHGVEITSSIAELLDKVDCVMLETNDGRIHLEQAMEV CCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHH FKSGKICYIDKPIGATLGQAIAIYEMAEKYNVPIFSSSALRYSPQNQKLRNGEFGKILGA HHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCCCCCEECC DCYSPHKVEPTHPDFGFYGIHGVETLYTLMGTGCESVNRMSSQDADVVVGRWKDGRIGTF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCCC RGIKEGPAIYGGTAYTPKGAIAAGGYEGYKVLLDQILTFFKTGVAPISKEETIEIFTFMK CCCCCCCCEECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHH ASNMSKEQNGKIVTMEEAYRKGLKDAQKLIKTYK HCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA