| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348993
Identifier: 29348993
GI number: 29348993
Start: 4639246
End: 4640652
Strand: Reverse
Name: 29348993
Synonym: BT_3585
Alternate gene names: NA
Gene position: 4640652-4639246 (Counterclockwise)
Preceding gene: 29348994
Following gene: 29348992
Centisome position: 74.13
GC content: 41.36
Gene sequence:
>1407_bases ATGAGGTACACATACAGACACATCGGGATCCTGACCATCTCATTAATAGTTGCTTCCTGCTCTTTTTCCCAAAAGCAGGC AGACAACAATCATGACAAAGATATGAATCCGAACGTAAAAATAGTGGTCCTCGACCCAGGACATTTTCATGCCAGTCTGT TGCAAAAGAATCCGCTGGCCTCAGTGAACGACACAATTCGGGTATATGCTCCCGAAGGAGCGGAAGTCAAACAATATCTG AACGACATAAATAGCTATAATCAACGGGCGGAGAATCCCACATCCTGGAAAGAAGAAATATATATTGGGGGCGATTATCT TTCCAGGATGCTTTCCGACCGTCAAGGGGACGTAGTTGTGCTTGCCGGAAACAACCAGAAAAAAACAAACTATATTCTGG AAGCTATCAAAGCAGGATACAATGTGCTTTCCGACAAGCCTTTGGCCATTAACAAGAAGGATTTCGACTTACTGATTCAA GCATATCAATTGGCAAAGGAAAGGAAATTACTCCTTTACGACTTGATGACTGAACGATATGACATCCTGAATATCATCGA AAAAGCATTACTGAACAATCCGGATCTTTTTGGTGAATTGCAAAAAGGGTCTTTGAATGATCCGTCAGTTTCTATGGAAA GTGTTCATCATTTCTTTAAGAATGTATCAGGCAAGCCACTGATTCGTCCGGTATGGTATTATGACACAGAGCAACAAGGA GAAGGTATTGCAGATGTAACCACTCATCTTATCGATCTGGTCAACTGGCAATGTTTCCCCAACGAAACCATCCGTTATCA GTCGGATGTAGAAGTATTGAAAGCCAGACATTGGCCTACCCGCATTACATTACCTGAATTTTCGCAATCGACGCAGGCTG ACACCTTCCCCGCCTTCTTGAACAAATATATCAATAATAATGTGCTGGAAGTTTTAGCGAATGGTAGCCTAAATTACACA GTAAAGGGGATTCATATAGGTATGAAGGTTATCTGGAATTACACTCCTCCAAGTGATGGTGGCGACACTTTTACCTCCCT TAAGAAAGGAAGTAAGGCTACATTGAAAACAATTCAGGACAAAGAAAGTGGTTTTGTGAAACAACTCTACATCCAAAGAG CTGCAGACTCTGATCACTCTGAATTTGAGAGCCAGTTGCAAAAGGCAATCAAACAACTGCAAGCGACCTATCCGTTCCTA TCCGTCAAAAAAATGAATGAAGGACTTTATCTGATTGATATTCCACAGGCGGACAGACTGGGACATGAAGCTCACTTCAG TAAAGTAGCAGAAGCATTCCTTGGCTATTTGCATGATAAAAATATGCCGGAATGGGAAAACGAGAATACAATATCTAAAT ATTATATCACCACTACAGCTGTAGAGCTGGCAAAGAAAGAGAAATAA
Upstream 100 bases:
>100_bases CAAAGAACAGAATGGCAAAATCGTTACCATGGAGGAGGCATACCGAAAAGGGCTGAAAGATGCACAGAAGCTAATTAAAA CCTACAAATAAAAATAGCAC
Downstream 100 bases:
>100_bases GAAAGACCGCAGACACGTGTTAAGAAGTGAAATAAAATATTATGCAGATGAATCCATGTTTCATGGATTCATTCCTCATG TTATGGGGACACGTCTTGAT
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MRYTYRHIGILTISLIVASCSFSQKQADNNHDKDMNPNVKIVVLDPGHFHASLLQKNPLASVNDTIRVYAPEGAEVKQYL NDINSYNQRAENPTSWKEEIYIGGDYLSRMLSDRQGDVVVLAGNNQKKTNYILEAIKAGYNVLSDKPLAINKKDFDLLIQ AYQLAKERKLLLYDLMTERYDILNIIEKALLNNPDLFGELQKGSLNDPSVSMESVHHFFKNVSGKPLIRPVWYYDTEQQG EGIADVTTHLIDLVNWQCFPNETIRYQSDVEVLKARHWPTRITLPEFSQSTQADTFPAFLNKYINNNVLEVLANGSLNYT VKGIHIGMKVIWNYTPPSDGGDTFTSLKKGSKATLKTIQDKESGFVKQLYIQRAADSDHSEFESQLQKAIKQLQATYPFL SVKKMNEGLYLIDIPQADRLGHEAHFSKVAEAFLGYLHDKNMPEWENENTISKYYITTTAVELAKKEK
Sequences:
>Translated_468_residues MRYTYRHIGILTISLIVASCSFSQKQADNNHDKDMNPNVKIVVLDPGHFHASLLQKNPLASVNDTIRVYAPEGAEVKQYL NDINSYNQRAENPTSWKEEIYIGGDYLSRMLSDRQGDVVVLAGNNQKKTNYILEAIKAGYNVLSDKPLAINKKDFDLLIQ AYQLAKERKLLLYDLMTERYDILNIIEKALLNNPDLFGELQKGSLNDPSVSMESVHHFFKNVSGKPLIRPVWYYDTEQQG EGIADVTTHLIDLVNWQCFPNETIRYQSDVEVLKARHWPTRITLPEFSQSTQADTFPAFLNKYINNNVLEVLANGSLNYT VKGIHIGMKVIWNYTPPSDGGDTFTSLKKGSKATLKTIQDKESGFVKQLYIQRAADSDHSEFESQLQKAIKQLQATYPFL SVKKMNEGLYLIDIPQADRLGHEAHFSKVAEAFLGYLHDKNMPEWENENTISKYYITTTAVELAKKEK >Mature_468_residues MRYTYRHIGILTISLIVASCSFSQKQADNNHDKDMNPNVKIVVLDPGHFHASLLQKNPLASVNDTIRVYAPEGAEVKQYL NDINSYNQRAENPTSWKEEIYIGGDYLSRMLSDRQGDVVVLAGNNQKKTNYILEAIKAGYNVLSDKPLAINKKDFDLLIQ AYQLAKERKLLLYDLMTERYDILNIIEKALLNNPDLFGELQKGSLNDPSVSMESVHHFFKNVSGKPLIRPVWYYDTEQQG EGIADVTTHLIDLVNWQCFPNETIRYQSDVEVLKARHWPTRITLPEFSQSTQADTFPAFLNKYINNNVLEVLANGSLNYT VKGIHIGMKVIWNYTPPSDGGDTFTSLKKGSKATLKTIQDKESGFVKQLYIQRAADSDHSEFESQLQKAIKQLQATYPFL SVKKMNEGLYLIDIPQADRLGHEAHFSKVAEAFLGYLHDKNMPEWENENTISKYYITTTAVELAKKEK
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53342; Mature: 53342
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYTYRHIGILTISLIVASCSFSQKQADNNHDKDMNPNVKIVVLDPGHFHASLLQKNPLA CCEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCC SVNDTIRVYAPEGAEVKQYLNDINSYNQRAENPTSWKEEIYIGGDYLSRMLSDRQGDVVV CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEEECHHHHHHHHCCCCCCEEE LAGNNQKKTNYILEAIKAGYNVLSDKPLAINKKDFDLLIQAYQLAKERKLLLYDLMTERY EECCCCCHHHHHHHHHHHCCHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DILNIIEKALLNNPDLFGELQKGSLNDPSVSMESVHHFFKNVSGKPLIRPVWYYDTEQQG HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCHHCC EGIADVTTHLIDLVNWQCFPNETIRYQSDVEVLKARHWPTRITLPEFSQSTQADTFPAFL CCHHHHHHHHHHHHCCEECCCCCEEECHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHH NKYINNNVLEVLANGSLNYTVKGIHIGMKVIWNYTPPSDGGDTFTSLKKGSKATLKTIQD HHHHCCCHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHH KESGFVKQLYIQRAADSDHSEFESQLQKAIKQLQATYPFLSVKKMNEGLYLIDIPQADRL HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHC GHEAHFSKVAEAFLGYLHDKNMPEWENENTISKYYITTTAVELAKKEK CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHCCC >Mature Secondary Structure MRYTYRHIGILTISLIVASCSFSQKQADNNHDKDMNPNVKIVVLDPGHFHASLLQKNPLA CCEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCC SVNDTIRVYAPEGAEVKQYLNDINSYNQRAENPTSWKEEIYIGGDYLSRMLSDRQGDVVV CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEEECHHHHHHHHCCCCCCEEE LAGNNQKKTNYILEAIKAGYNVLSDKPLAINKKDFDLLIQAYQLAKERKLLLYDLMTERY EECCCCCHHHHHHHHHHHCCHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DILNIIEKALLNNPDLFGELQKGSLNDPSVSMESVHHFFKNVSGKPLIRPVWYYDTEQQG HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCHHCC EGIADVTTHLIDLVNWQCFPNETIRYQSDVEVLKARHWPTRITLPEFSQSTQADTFPAFL CCHHHHHHHHHHHHCCEECCCCCEEECHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHH NKYINNNVLEVLANGSLNYTVKGIHIGMKVIWNYTPPSDGGDTFTSLKKGSKATLKTIQD HHHHCCCHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHH KESGFVKQLYIQRAADSDHSEFESQLQKAIKQLQATYPFLSVKKMNEGLYLIDIPQADRL HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHC GHEAHFSKVAEAFLGYLHDKNMPEWENENTISKYYITTTAVELAKKEK CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA