Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348993

Identifier: 29348993

GI number: 29348993

Start: 4639246

End: 4640652

Strand: Reverse

Name: 29348993

Synonym: BT_3585

Alternate gene names: NA

Gene position: 4640652-4639246 (Counterclockwise)

Preceding gene: 29348994

Following gene: 29348992

Centisome position: 74.13

GC content: 41.36

Gene sequence:

>1407_bases
ATGAGGTACACATACAGACACATCGGGATCCTGACCATCTCATTAATAGTTGCTTCCTGCTCTTTTTCCCAAAAGCAGGC
AGACAACAATCATGACAAAGATATGAATCCGAACGTAAAAATAGTGGTCCTCGACCCAGGACATTTTCATGCCAGTCTGT
TGCAAAAGAATCCGCTGGCCTCAGTGAACGACACAATTCGGGTATATGCTCCCGAAGGAGCGGAAGTCAAACAATATCTG
AACGACATAAATAGCTATAATCAACGGGCGGAGAATCCCACATCCTGGAAAGAAGAAATATATATTGGGGGCGATTATCT
TTCCAGGATGCTTTCCGACCGTCAAGGGGACGTAGTTGTGCTTGCCGGAAACAACCAGAAAAAAACAAACTATATTCTGG
AAGCTATCAAAGCAGGATACAATGTGCTTTCCGACAAGCCTTTGGCCATTAACAAGAAGGATTTCGACTTACTGATTCAA
GCATATCAATTGGCAAAGGAAAGGAAATTACTCCTTTACGACTTGATGACTGAACGATATGACATCCTGAATATCATCGA
AAAAGCATTACTGAACAATCCGGATCTTTTTGGTGAATTGCAAAAAGGGTCTTTGAATGATCCGTCAGTTTCTATGGAAA
GTGTTCATCATTTCTTTAAGAATGTATCAGGCAAGCCACTGATTCGTCCGGTATGGTATTATGACACAGAGCAACAAGGA
GAAGGTATTGCAGATGTAACCACTCATCTTATCGATCTGGTCAACTGGCAATGTTTCCCCAACGAAACCATCCGTTATCA
GTCGGATGTAGAAGTATTGAAAGCCAGACATTGGCCTACCCGCATTACATTACCTGAATTTTCGCAATCGACGCAGGCTG
ACACCTTCCCCGCCTTCTTGAACAAATATATCAATAATAATGTGCTGGAAGTTTTAGCGAATGGTAGCCTAAATTACACA
GTAAAGGGGATTCATATAGGTATGAAGGTTATCTGGAATTACACTCCTCCAAGTGATGGTGGCGACACTTTTACCTCCCT
TAAGAAAGGAAGTAAGGCTACATTGAAAACAATTCAGGACAAAGAAAGTGGTTTTGTGAAACAACTCTACATCCAAAGAG
CTGCAGACTCTGATCACTCTGAATTTGAGAGCCAGTTGCAAAAGGCAATCAAACAACTGCAAGCGACCTATCCGTTCCTA
TCCGTCAAAAAAATGAATGAAGGACTTTATCTGATTGATATTCCACAGGCGGACAGACTGGGACATGAAGCTCACTTCAG
TAAAGTAGCAGAAGCATTCCTTGGCTATTTGCATGATAAAAATATGCCGGAATGGGAAAACGAGAATACAATATCTAAAT
ATTATATCACCACTACAGCTGTAGAGCTGGCAAAGAAAGAGAAATAA

Upstream 100 bases:

>100_bases
CAAAGAACAGAATGGCAAAATCGTTACCATGGAGGAGGCATACCGAAAAGGGCTGAAAGATGCACAGAAGCTAATTAAAA
CCTACAAATAAAAATAGCAC

Downstream 100 bases:

>100_bases
GAAAGACCGCAGACACGTGTTAAGAAGTGAAATAAAATATTATGCAGATGAATCCATGTTTCATGGATTCATTCCTCATG
TTATGGGGACACGTCTTGAT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MRYTYRHIGILTISLIVASCSFSQKQADNNHDKDMNPNVKIVVLDPGHFHASLLQKNPLASVNDTIRVYAPEGAEVKQYL
NDINSYNQRAENPTSWKEEIYIGGDYLSRMLSDRQGDVVVLAGNNQKKTNYILEAIKAGYNVLSDKPLAINKKDFDLLIQ
AYQLAKERKLLLYDLMTERYDILNIIEKALLNNPDLFGELQKGSLNDPSVSMESVHHFFKNVSGKPLIRPVWYYDTEQQG
EGIADVTTHLIDLVNWQCFPNETIRYQSDVEVLKARHWPTRITLPEFSQSTQADTFPAFLNKYINNNVLEVLANGSLNYT
VKGIHIGMKVIWNYTPPSDGGDTFTSLKKGSKATLKTIQDKESGFVKQLYIQRAADSDHSEFESQLQKAIKQLQATYPFL
SVKKMNEGLYLIDIPQADRLGHEAHFSKVAEAFLGYLHDKNMPEWENENTISKYYITTTAVELAKKEK

Sequences:

>Translated_468_residues
MRYTYRHIGILTISLIVASCSFSQKQADNNHDKDMNPNVKIVVLDPGHFHASLLQKNPLASVNDTIRVYAPEGAEVKQYL
NDINSYNQRAENPTSWKEEIYIGGDYLSRMLSDRQGDVVVLAGNNQKKTNYILEAIKAGYNVLSDKPLAINKKDFDLLIQ
AYQLAKERKLLLYDLMTERYDILNIIEKALLNNPDLFGELQKGSLNDPSVSMESVHHFFKNVSGKPLIRPVWYYDTEQQG
EGIADVTTHLIDLVNWQCFPNETIRYQSDVEVLKARHWPTRITLPEFSQSTQADTFPAFLNKYINNNVLEVLANGSLNYT
VKGIHIGMKVIWNYTPPSDGGDTFTSLKKGSKATLKTIQDKESGFVKQLYIQRAADSDHSEFESQLQKAIKQLQATYPFL
SVKKMNEGLYLIDIPQADRLGHEAHFSKVAEAFLGYLHDKNMPEWENENTISKYYITTTAVELAKKEK
>Mature_468_residues
MRYTYRHIGILTISLIVASCSFSQKQADNNHDKDMNPNVKIVVLDPGHFHASLLQKNPLASVNDTIRVYAPEGAEVKQYL
NDINSYNQRAENPTSWKEEIYIGGDYLSRMLSDRQGDVVVLAGNNQKKTNYILEAIKAGYNVLSDKPLAINKKDFDLLIQ
AYQLAKERKLLLYDLMTERYDILNIIEKALLNNPDLFGELQKGSLNDPSVSMESVHHFFKNVSGKPLIRPVWYYDTEQQG
EGIADVTTHLIDLVNWQCFPNETIRYQSDVEVLKARHWPTRITLPEFSQSTQADTFPAFLNKYINNNVLEVLANGSLNYT
VKGIHIGMKVIWNYTPPSDGGDTFTSLKKGSKATLKTIQDKESGFVKQLYIQRAADSDHSEFESQLQKAIKQLQATYPFL
SVKKMNEGLYLIDIPQADRLGHEAHFSKVAEAFLGYLHDKNMPEWENENTISKYYITTTAVELAKKEK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53342; Mature: 53342

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYTYRHIGILTISLIVASCSFSQKQADNNHDKDMNPNVKIVVLDPGHFHASLLQKNPLA
CCEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCC
SVNDTIRVYAPEGAEVKQYLNDINSYNQRAENPTSWKEEIYIGGDYLSRMLSDRQGDVVV
CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEEECHHHHHHHHCCCCCCEEE
LAGNNQKKTNYILEAIKAGYNVLSDKPLAINKKDFDLLIQAYQLAKERKLLLYDLMTERY
EECCCCCHHHHHHHHHHHCCHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILNIIEKALLNNPDLFGELQKGSLNDPSVSMESVHHFFKNVSGKPLIRPVWYYDTEQQG
HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCHHCC
EGIADVTTHLIDLVNWQCFPNETIRYQSDVEVLKARHWPTRITLPEFSQSTQADTFPAFL
CCHHHHHHHHHHHHCCEECCCCCEEECHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHH
NKYINNNVLEVLANGSLNYTVKGIHIGMKVIWNYTPPSDGGDTFTSLKKGSKATLKTIQD
HHHHCCCHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHH
KESGFVKQLYIQRAADSDHSEFESQLQKAIKQLQATYPFLSVKKMNEGLYLIDIPQADRL
HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHC
GHEAHFSKVAEAFLGYLHDKNMPEWENENTISKYYITTTAVELAKKEK
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHCCC
>Mature Secondary Structure
MRYTYRHIGILTISLIVASCSFSQKQADNNHDKDMNPNVKIVVLDPGHFHASLLQKNPLA
CCEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCC
SVNDTIRVYAPEGAEVKQYLNDINSYNQRAENPTSWKEEIYIGGDYLSRMLSDRQGDVVV
CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEEECHHHHHHHHCCCCCCEEE
LAGNNQKKTNYILEAIKAGYNVLSDKPLAINKKDFDLLIQAYQLAKERKLLLYDLMTERY
EECCCCCHHHHHHHHHHHCCHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILNIIEKALLNNPDLFGELQKGSLNDPSVSMESVHHFFKNVSGKPLIRPVWYYDTEQQG
HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCHHCC
EGIADVTTHLIDLVNWQCFPNETIRYQSDVEVLKARHWPTRITLPEFSQSTQADTFPAFL
CCHHHHHHHHHHHHCCEECCCCCEEECHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHH
NKYINNNVLEVLANGSLNYTVKGIHIGMKVIWNYTPPSDGGDTFTSLKKGSKATLKTIQD
HHHHCCCHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHH
KESGFVKQLYIQRAADSDHSEFESQLQKAIKQLQATYPFLSVKKMNEGLYLIDIPQADRL
HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHC
GHEAHFSKVAEAFLGYLHDKNMPEWENENTISKYYITTTAVELAKKEK
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA