Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348994

Identifier: 29348994

GI number: 29348994

Start: 4640662

End: 4641666

Strand: Reverse

Name: 29348994

Synonym: BT_3586

Alternate gene names: NA

Gene position: 4641666-4640662 (Counterclockwise)

Preceding gene: 29348995

Following gene: 29348993

Centisome position: 74.14

GC content: 42.59

Gene sequence:

>1005_bases
ATGAAAAATATCTTATTTATCCTCCTTACTTTCTTGTCTGTCAGCTTCAGACTATATGCGCAGGATGTAATTAAAATAGG
AATTATCGGGCTCGATACTTCCCATTCTACAGCTTTCACCGAGCTACTGAACGGAGACTCTGACGATAAGTTTGTCAAAG
AGTTCGAAGTCGTAGCAGCTTACCCTTATGGTTCAAAGACTATCCAGTCCAGTTACGAACGAATTCCCGGATATATAGAA
GAGGTCAAGAAACACGGTGTGGAGATTACATCTTCCATAGCGGAATTGCTTGACAAGGTAGATTGCGTCATGCTTGAAAC
AAACGACGGTAGAATCCACCTCGAACAAGCAATGGAAGTATTCAAATCCGGAAAAATATGCTATATCGACAAGCCTATTG
GAGCGACATTGGGACAAGCTATTGCCATTTACGAAATGGCGGAGAAATACAATGTGCCTATCTTTTCTTCTTCTGCACTC
AGATATTCTCCACAGAATCAAAAGCTGAGAAACGGAGAGTTCGGCAAAATTCTGGGAGCTGACTGTTATTCTCCTCACAA
GGTAGAACCGACTCACCCCGATTTCGGTTTTTATGGCATTCACGGAGTAGAAACGCTTTATACTCTTATGGGAACCGGTT
GCGAGTCAGTCAACCGTATGTCTTCCCAAGATGCTGATGTAGTGGTAGGCCGTTGGAAAGACGGGCGGATAGGTACTTTC
AGGGGAATCAAAGAAGGTCCGGCCATTTATGGCGGTACAGCTTATACCCCCAAAGGTGCAATAGCAGCAGGAGGATATGA
AGGTTACAAAGTTTTGCTCGATCAAATACTCACTTTTTTCAAGACCGGAGTAGCTCCGATTTCGAAAGAAGAAACAATTG
AGATATTCACTTTTATGAAAGCTTCCAATATGAGCAAAGAACAGAATGGCAAAATCGTTACCATGGAGGAGGCATACCGA
AAAGGGCTGAAAGATGCACAGAAGCTAATTAAAACCTACAAATAA

Upstream 100 bases:

>100_bases
AATTTCCGAAAAATGTCCGGCCAGTATATTACGCAAAAAAGAAAATTCTTGTTTATATTTGGATCCTGAAAGTGCAGAAC
GAATAAACTTATAAATACAT

Downstream 100 bases:

>100_bases
AAATAGCACATGAGGTACACATACAGACACATCGGGATCCTGACCATCTCATTAATAGTTGCTTCCTGCTCTTTTTCCCA
AAAGCAGGCAGACAACAATC

Product: putative dehydrogenase

Products: NA

Alternate protein names: Oxidoreductase Domain-Containing Protein; Oxidoreductase; Dehydrogenase

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKNILFILLTFLSVSFRLYAQDVIKIGIIGLDTSHSTAFTELLNGDSDDKFVKEFEVVAAYPYGSKTIQSSYERIPGYIE
EVKKHGVEITSSIAELLDKVDCVMLETNDGRIHLEQAMEVFKSGKICYIDKPIGATLGQAIAIYEMAEKYNVPIFSSSAL
RYSPQNQKLRNGEFGKILGADCYSPHKVEPTHPDFGFYGIHGVETLYTLMGTGCESVNRMSSQDADVVVGRWKDGRIGTF
RGIKEGPAIYGGTAYTPKGAIAAGGYEGYKVLLDQILTFFKTGVAPISKEETIEIFTFMKASNMSKEQNGKIVTMEEAYR
KGLKDAQKLIKTYK

Sequences:

>Translated_334_residues
MKNILFILLTFLSVSFRLYAQDVIKIGIIGLDTSHSTAFTELLNGDSDDKFVKEFEVVAAYPYGSKTIQSSYERIPGYIE
EVKKHGVEITSSIAELLDKVDCVMLETNDGRIHLEQAMEVFKSGKICYIDKPIGATLGQAIAIYEMAEKYNVPIFSSSAL
RYSPQNQKLRNGEFGKILGADCYSPHKVEPTHPDFGFYGIHGVETLYTLMGTGCESVNRMSSQDADVVVGRWKDGRIGTF
RGIKEGPAIYGGTAYTPKGAIAAGGYEGYKVLLDQILTFFKTGVAPISKEETIEIFTFMKASNMSKEQNGKIVTMEEAYR
KGLKDAQKLIKTYK
>Mature_334_residues
MKNILFILLTFLSVSFRLYAQDVIKIGIIGLDTSHSTAFTELLNGDSDDKFVKEFEVVAAYPYGSKTIQSSYERIPGYIE
EVKKHGVEITSSIAELLDKVDCVMLETNDGRIHLEQAMEVFKSGKICYIDKPIGATLGQAIAIYEMAEKYNVPIFSSSAL
RYSPQNQKLRNGEFGKILGADCYSPHKVEPTHPDFGFYGIHGVETLYTLMGTGCESVNRMSSQDADVVVGRWKDGRIGTF
RGIKEGPAIYGGTAYTPKGAIAAGGYEGYKVLLDQILTFFKTGVAPISKEETIEIFTFMKASNMSKEQNGKIVTMEEAYR
KGLKDAQKLIKTYK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37046; Mature: 37046

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILFILLTFLSVSFRLYAQDVIKIGIIGLDTSHSTAFTELLNGDSDDKFVKEFEVVAA
CCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHEEEEE
YPYGSKTIQSSYERIPGYIEEVKKHGVEITSSIAELLDKVDCVMLETNDGRIHLEQAMEV
CCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHH
FKSGKICYIDKPIGATLGQAIAIYEMAEKYNVPIFSSSALRYSPQNQKLRNGEFGKILGA
HHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCCCCCEECC
DCYSPHKVEPTHPDFGFYGIHGVETLYTLMGTGCESVNRMSSQDADVVVGRWKDGRIGTF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCCC
RGIKEGPAIYGGTAYTPKGAIAAGGYEGYKVLLDQILTFFKTGVAPISKEETIEIFTFMK
CCCCCCCCEECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHH
ASNMSKEQNGKIVTMEEAYRKGLKDAQKLIKTYK
HCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNILFILLTFLSVSFRLYAQDVIKIGIIGLDTSHSTAFTELLNGDSDDKFVKEFEVVAA
CCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHEEEEE
YPYGSKTIQSSYERIPGYIEEVKKHGVEITSSIAELLDKVDCVMLETNDGRIHLEQAMEV
CCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHH
FKSGKICYIDKPIGATLGQAIAIYEMAEKYNVPIFSSSALRYSPQNQKLRNGEFGKILGA
HHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCCCCCEECC
DCYSPHKVEPTHPDFGFYGIHGVETLYTLMGTGCESVNRMSSQDADVVVGRWKDGRIGTF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCCC
RGIKEGPAIYGGTAYTPKGAIAAGGYEGYKVLLDQILTFFKTGVAPISKEETIEIFTFMK
CCCCCCCCEECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHH
ASNMSKEQNGKIVTMEEAYRKGLKDAQKLIKTYK
HCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA