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The map label for this gene is 29348992

Identifier: 29348992

GI number: 29348992

Start: 4638420

End: 4639163

Strand: Reverse

Name: 29348992

Synonym: BT_3584

Alternate gene names: NA

Gene position: 4639163-4638420 (Counterclockwise)

Preceding gene: 29348993

Following gene: 29348991

Centisome position: 74.1

GC content: 39.78

Gene sequence:

>744_bases
ATGGGGACACGTCTTGATATCCTGATGATTCACTCCAACCTTCCCCTCCTAAACATGCTTTGGGCACATATTACCGACGA
GTTAGAAAGGTTGGATAAGATGTTGAATCGATTTGATGCCACAAGTGAAGTATCAAAGCTAAACAGCCATACACAACAAG
ATTCAGTTTCTGTCAGTGCGGAATTGGAAGATATCCTACGGTCATGCCAATATTATTATGAAAAGACTCTTCATCTTTTC
GACATCACATTAAACGATTTCTCACAAATACAAATTCACGGCAATCACCATATCTCTTTTAGCAACTTTTCCGTAACACT
TGATTTTGGAGGTTTCGCGAAGGGATACGCCTTAAAAAAGATTCAAGAAATCCTCTTGCGGGGAAATATAGAGAATGCTT
TCGTCGATTTTGGCAACAGTTCGATTATGGGAATAGGACACCATCCTTATGGAGACTGCTGGAAAGTCAGTTTGCAGAAT
CCTTACACTCAACAAACTCTTGACGAATTTTGCCTTACTGACAATACGTTGTCCACTTCCGGGAATACGGAACAGTACAC
CGGACATATTATAAATCCGCTTACAGGAATCTACAACGAACAAAAAAAAGTTACGAGTATCTTATCAGACAATCCGCTGG
ATGCAGAAATACTCAGTACAGTCTGGATGATTGCCGACGACCAACAACGGGAACAGATCAACGAGAACTTCAAACATATA
AAAGGAACTATATATACTCTATAA

Upstream 100 bases:

>100_bases
GCAAAGAAAGAGAAATAAGAAAGACCGCAGACACGTGTTAAGAAGTGAAATAAAATATTATGCAGATGAATCCATGTTTC
ATGGATTCATTCCTCATGTT

Downstream 100 bases:

>100_bases
AATGAGAAACAAAATAGAAAAAGGAGTCGATTTGAATCTCAGACAATTCATCAAAAGTCTGGGATATATCGCAGGAGGAA
CTGCACTGCTGGCAAGCACA

Product: thiamine biosynthesis lipoprotein ApbE

Products: NA

Alternate protein names: Thiamine Biosynthesis Lipoprotein ApbE; ApbE Family Protein; ApbE Family; Thiamine Biosynthesis Lipoprotein; Membrane-Associated Lipoprotein; ApbE-Like Lipoprotein

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MGTRLDILMIHSNLPLLNMLWAHITDELERLDKMLNRFDATSEVSKLNSHTQQDSVSVSAELEDILRSCQYYYEKTLHLF
DITLNDFSQIQIHGNHHISFSNFSVTLDFGGFAKGYALKKIQEILLRGNIENAFVDFGNSSIMGIGHHPYGDCWKVSLQN
PYTQQTLDEFCLTDNTLSTSGNTEQYTGHIINPLTGIYNEQKKVTSILSDNPLDAEILSTVWMIADDQQREQINENFKHI
KGTIYTL

Sequences:

>Translated_247_residues
MGTRLDILMIHSNLPLLNMLWAHITDELERLDKMLNRFDATSEVSKLNSHTQQDSVSVSAELEDILRSCQYYYEKTLHLF
DITLNDFSQIQIHGNHHISFSNFSVTLDFGGFAKGYALKKIQEILLRGNIENAFVDFGNSSIMGIGHHPYGDCWKVSLQN
PYTQQTLDEFCLTDNTLSTSGNTEQYTGHIINPLTGIYNEQKKVTSILSDNPLDAEILSTVWMIADDQQREQINENFKHI
KGTIYTL
>Mature_246_residues
GTRLDILMIHSNLPLLNMLWAHITDELERLDKMLNRFDATSEVSKLNSHTQQDSVSVSAELEDILRSCQYYYEKTLHLFD
ITLNDFSQIQIHGNHHISFSNFSVTLDFGGFAKGYALKKIQEILLRGNIENAFVDFGNSSIMGIGHHPYGDCWKVSLQNP
YTQQTLDEFCLTDNTLSTSGNTEQYTGHIINPLTGIYNEQKKVTSILSDNPLDAEILSTVWMIADDQQREQINENFKHIK
GTIYTL

Specific function: Unknown

COG id: COG1477

COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28195; Mature: 28064

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTRLDILMIHSNLPLLNMLWAHITDELERLDKMLNRFDATSEVSKLNSHTQQDSVSVSA
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEHHH
ELEDILRSCQYYYEKTLHLFDITLNDFSQIQIHGNHHISFSNFSVTLDFGGFAKGYALKK
HHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEECCEEEEEECEEEEEECCCCHHHHHHHH
IQEILLRGNIENAFVDFGNSSIMGIGHHPYGDCWKVSLQNPYTQQTLDEFCLTDNTLSTS
HHHHHHHCCCCHHEEECCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC
GNTEQYTGHIINPLTGIYNEQKKVTSILSDNPLDAEILSTVWMIADDQQREQINENFKHI
CCCCCCCCCHHCHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
KGTIYTL
CEEEEEC
>Mature Secondary Structure 
GTRLDILMIHSNLPLLNMLWAHITDELERLDKMLNRFDATSEVSKLNSHTQQDSVSVSA
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEHHH
ELEDILRSCQYYYEKTLHLFDITLNDFSQIQIHGNHHISFSNFSVTLDFGGFAKGYALKK
HHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEECCEEEEEECEEEEEECCCCHHHHHHHH
IQEILLRGNIENAFVDFGNSSIMGIGHHPYGDCWKVSLQNPYTQQTLDEFCLTDNTLSTS
HHHHHHHCCCCHHEEECCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC
GNTEQYTGHIINPLTGIYNEQKKVTSILSDNPLDAEILSTVWMIADDQQREQINENFKHI
CCCCCCCCCHHCHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
KGTIYTL
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA