| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348944
Identifier: 29348944
GI number: 29348944
Start: 4573094
End: 4573798
Strand: Reverse
Name: 29348944
Synonym: BT_3535
Alternate gene names: NA
Gene position: 4573798-4573094 (Counterclockwise)
Preceding gene: 29348948
Following gene: 29348943
Centisome position: 73.06
GC content: 35.04
Gene sequence:
>705_bases ATGAATCGATTAAGACATTTAATGTCATTATGTATTTTTATATCACTAATGGCATGCGAACAAAATGAAGACTGGGTTGT AAATGAACCGATGCAATCATTTGAAGAAAATCCAGAGTACGCTCCTCTCAATACTATTCCTGATTGGGTTAGTGAAAAAG TGACACCTAAAGAATACGAACTATGGAGAACCATGAGTTCAAGGTATGAAATAAATTATTCCTTTTTAAAAAAGGATATT TCAGAAAAAAGGAAAAAAGAAATCTATGATTGCATCAACAACATCTGTGAAAGAATAGAAAAAGGGCAGATTAATAAATA TGAAGGATTCCTAAATATAGCAGATGAAGATGGCACCACCCTATCAGACTCACAATATTTTGGCAGAATAGCAACAAGAT CACCAGAAGGAGGAGCTGAATATAAGACAAATGGATGTACATTGTATACACATAGCTTAGGTCCCTATATAAAAGCTGCT GTTACTTACAAAAAATCCGATGATGATGTTACAATTACGTCATCGAGTGTTTATACGGGATCACCATATTTAGGAAATGA CCCGAGTTTTTCTGGTGCTTCCAGTGTTTCTTACGATAAGGATAAGAAATTAATAGCCGCATCGTGTAGCGGAACTTTAT CATTCAAAGATGGATCCAGAAAGGTTGAGGTAACTGTACAAAAGACAGGATTCATGATCCCATGA
Upstream 100 bases:
>100_bases TTCCCTTTTTTCACACTTAAAAGATTCGTACCTTTGCAAAAAGAGTATGAAGTCCTAAAAAAGAACATGACATCCATTTA ATTTTAAATAAATATCACTT
Downstream 100 bases:
>100_bases TCAATTTGAATATACACAAGATTAATCTTGGTACAGTTAGTACTCTTTTGTGATTTTCTATTCAGATCTTGAAAAAAGTT ATAGAACAATTAAAAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MNRLRHLMSLCIFISLMACEQNEDWVVNEPMQSFEENPEYAPLNTIPDWVSEKVTPKEYELWRTMSSRYEINYSFLKKDI SEKRKKEIYDCINNICERIEKGQINKYEGFLNIADEDGTTLSDSQYFGRIATRSPEGGAEYKTNGCTLYTHSLGPYIKAA VTYKKSDDDVTITSSSVYTGSPYLGNDPSFSGASSVSYDKDKKLIAASCSGTLSFKDGSRKVEVTVQKTGFMIP
Sequences:
>Translated_234_residues MNRLRHLMSLCIFISLMACEQNEDWVVNEPMQSFEENPEYAPLNTIPDWVSEKVTPKEYELWRTMSSRYEINYSFLKKDI SEKRKKEIYDCINNICERIEKGQINKYEGFLNIADEDGTTLSDSQYFGRIATRSPEGGAEYKTNGCTLYTHSLGPYIKAA VTYKKSDDDVTITSSSVYTGSPYLGNDPSFSGASSVSYDKDKKLIAASCSGTLSFKDGSRKVEVTVQKTGFMIP >Mature_234_residues MNRLRHLMSLCIFISLMACEQNEDWVVNEPMQSFEENPEYAPLNTIPDWVSEKVTPKEYELWRTMSSRYEINYSFLKKDI SEKRKKEIYDCINNICERIEKGQINKYEGFLNIADEDGTTLSDSQYFGRIATRSPEGGAEYKTNGCTLYTHSLGPYIKAA VTYKKSDDDVTITSSSVYTGSPYLGNDPSFSGASSVSYDKDKKLIAASCSGTLSFKDGSRKVEVTVQKTGFMIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26482; Mature: 26482
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLRHLMSLCIFISLMACEQNEDWVVNEPMQSFEENPEYAPLNTIPDWVSEKVTPKEYE CHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCCCCCHHHHCCCCCHHHH LWRTMSSRYEINYSFLKKDISEKRKKEIYDCINNICERIEKGQINKYEGFLNIADEDGTT HHHHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCE LSDSQYFGRIATRSPEGGAEYKTNGCTLYTHSLGPYIKAAVTYKKSDDDVTITSSSVYTG ECCCHHHHHHCCCCCCCCCCEECCCEEEEECCCCCCEEEEEEEECCCCCEEEEECCEEEC SPYLGNDPSFSGASSVSYDKDKKLIAASCSGTLSFKDGSRKVEVTVQKTGFMIP CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCC >Mature Secondary Structure MNRLRHLMSLCIFISLMACEQNEDWVVNEPMQSFEENPEYAPLNTIPDWVSEKVTPKEYE CHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCCCCCHHHHCCCCCHHHH LWRTMSSRYEINYSFLKKDISEKRKKEIYDCINNICERIEKGQINKYEGFLNIADEDGTT HHHHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCE LSDSQYFGRIATRSPEGGAEYKTNGCTLYTHSLGPYIKAAVTYKKSDDDVTITSSSVYTG ECCCHHHHHHCCCCCCCCCCEECCCEEEEECCCCCCEEEEEEEECCCCCEEEEECCEEEC SPYLGNDPSFSGASSVSYDKDKKLIAASCSGTLSFKDGSRKVEVTVQKTGFMIP CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA