| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29348882
Identifier: 29348882
GI number: 29348882
Start: 4472325
End: 4473326
Strand: Reverse
Name: 29348882
Synonym: BT_3473
Alternate gene names: NA
Gene position: 4473326-4472325 (Counterclockwise)
Preceding gene: 29348883
Following gene: 29348881
Centisome position: 71.45
GC content: 38.12
Gene sequence:
>1002_bases ATGAAAAAGATATATTATTTACTCTTAGCCATGACTGTACTGATAGTATGTGCGTCATGCAATAATGAATGGGAATCTGA ACAATATGTGCAAATGGTATCTTTCAAGGCACCAGTCAACGCACAAGGAGTAACTCCTATTTACATACGTTACAAGCCGG AAGGGAAAGTAACATACCAACTCCCATTGATAGTCAGCGGGTCAACCATGAATTCCAAAGACTTGAATGTGCATGTAGGA TTGGATCTTGACACATTGGATGTGTTGAATGTTGAACATTTCGGCAGCCGTAAAGAACTTTTCTTTAAACCGTTGGAAAA CAAGTATTACGAGTTCCCGGAAACAGTACAGATACCGGCAGGCGAATGTACAAGCTTACTGCCTATCGATTTTGCCCTGA AAGATTTAGATCAGGTAGACAAATGGGTATTGCCGTTAGCTATTCAGAGCAACGATCCATCACACAACTACCAGGCCAAT CCCCGCAAATTTTATAGGAGGGCGATGTTACGTATTTCCCCATTCAATGATTATTCCGGGCAATATAGTGCTACTGCGTA TAAAGTATATTTTAAAGGAAACGAAAAAGAGGCTATAGTTCCGGAATACCATACTTCTTATGTAATAGATGACAAAACTA TATTTTTCTATGCGGGCCTTATAGACATTGACCGCTTGGATCGGAAATATTACAAAATTAAATTTGAATTTACAGAAGAG AAAATAGATCTTCAAACACGTAAGCTGAAGATTTCTTCTGATAATGAGGACATAAATCTGGTAGTGAAAGGGCAACCTTC CTATACGGTTGAAGAAGAGATGGATGCTACACGACCTTACCTAAAACATATTTACGTAACAATCAACAATCTGGAATATG AGTTTACAGATTATACTTCAGTTCCGGGTTATCCGCTTGAATATGTTGTAAAGGGATCTCTAACGATGGAACGTAAAATA AATACTCAAATACCAGACGAAGATCAGGCAATTGAATGGTAA
Upstream 100 bases:
>100_bases TGGTTTTGGCCAATCAATCATACTGAATTAAAGCGCAACAAACGTTTAACTCAAAATCCAGGCTGGACTTATCCGGAATA ATCTTATAAACTTGAAAAAA
Downstream 100 bases:
>100_bases ATGCCAATTTTAATAAAAAGAAGAGTGAATTTTATAGAAAGTTTACTCTTCTTTCTATATTTGCATACAGAATAAAATAC TGAGAATCAAATAACTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MKKIYYLLLAMTVLIVCASCNNEWESEQYVQMVSFKAPVNAQGVTPIYIRYKPEGKVTYQLPLIVSGSTMNSKDLNVHVG LDLDTLDVLNVEHFGSRKELFFKPLENKYYEFPETVQIPAGECTSLLPIDFALKDLDQVDKWVLPLAIQSNDPSHNYQAN PRKFYRRAMLRISPFNDYSGQYSATAYKVYFKGNEKEAIVPEYHTSYVIDDKTIFFYAGLIDIDRLDRKYYKIKFEFTEE KIDLQTRKLKISSDNEDINLVVKGQPSYTVEEEMDATRPYLKHIYVTINNLEYEFTDYTSVPGYPLEYVVKGSLTMERKI NTQIPDEDQAIEW
Sequences:
>Translated_333_residues MKKIYYLLLAMTVLIVCASCNNEWESEQYVQMVSFKAPVNAQGVTPIYIRYKPEGKVTYQLPLIVSGSTMNSKDLNVHVG LDLDTLDVLNVEHFGSRKELFFKPLENKYYEFPETVQIPAGECTSLLPIDFALKDLDQVDKWVLPLAIQSNDPSHNYQAN PRKFYRRAMLRISPFNDYSGQYSATAYKVYFKGNEKEAIVPEYHTSYVIDDKTIFFYAGLIDIDRLDRKYYKIKFEFTEE KIDLQTRKLKISSDNEDINLVVKGQPSYTVEEEMDATRPYLKHIYVTINNLEYEFTDYTSVPGYPLEYVVKGSLTMERKI NTQIPDEDQAIEW >Mature_333_residues MKKIYYLLLAMTVLIVCASCNNEWESEQYVQMVSFKAPVNAQGVTPIYIRYKPEGKVTYQLPLIVSGSTMNSKDLNVHVG LDLDTLDVLNVEHFGSRKELFFKPLENKYYEFPETVQIPAGECTSLLPIDFALKDLDQVDKWVLPLAIQSNDPSHNYQAN PRKFYRRAMLRISPFNDYSGQYSATAYKVYFKGNEKEAIVPEYHTSYVIDDKTIFFYAGLIDIDRLDRKYYKIKFEFTEE KIDLQTRKLKISSDNEDINLVVKGQPSYTVEEEMDATRPYLKHIYVTINNLEYEFTDYTSVPGYPLEYVVKGSLTMERKI NTQIPDEDQAIEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38776; Mature: 38776
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIYYLLLAMTVLIVCASCNNEWESEQYVQMVSFKAPVNAQGVTPIYIRYKPEGKVTYQ CCHHHHHHHHHHHHHEECCCCCCCCCHHHEEEEEECCCCCCCCCCEEEEEECCCCEEEEE LPLIVSGSTMNSKDLNVHVGLDLDTLDVLNVEHFGSRKELFFKPLENKYYEFPETVQIPA EEEEEECCCCCCCCCEEEEECCCCCEEEECHHHCCCCCCEEEECCCCCCCCCCCEEECCC GECTSLLPIDFALKDLDQVDKWVLPLAIQSNDPSHNYQANPRKFYRRAMLRISPFNDYSG CCCCEEEEHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCC QYSATAYKVYFKGNEKEAIVPEYHTSYVIDDKTIFFYAGLIDIDRLDRKYYKIKFEFTEE CEEEEEEEEEEECCCCCEECCCCCCEEEEECCEEEEEEEEEEHHHCCCEEEEEEEEEECC KIDLQTRKLKISSDNEDINLVVKGQPSYTVEEEMDATRPYLKHIYVTINNLEYEFTDYTS EECEEEEEEEEECCCCCEEEEEECCCCEEEHHHHHCCCCEEEEEEEEEECEEEEECCCCC VPGYPLEYVVKGSLTMERKINTQIPDEDQAIEW CCCCCEEEEEECCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MKKIYYLLLAMTVLIVCASCNNEWESEQYVQMVSFKAPVNAQGVTPIYIRYKPEGKVTYQ CCHHHHHHHHHHHHHEECCCCCCCCCHHHEEEEEECCCCCCCCCCEEEEEECCCCEEEEE LPLIVSGSTMNSKDLNVHVGLDLDTLDVLNVEHFGSRKELFFKPLENKYYEFPETVQIPA EEEEEECCCCCCCCCEEEEECCCCCEEEECHHHCCCCCCEEEECCCCCCCCCCCEEECCC GECTSLLPIDFALKDLDQVDKWVLPLAIQSNDPSHNYQANPRKFYRRAMLRISPFNDYSG CCCCEEEEHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCC QYSATAYKVYFKGNEKEAIVPEYHTSYVIDDKTIFFYAGLIDIDRLDRKYYKIKFEFTEE CEEEEEEEEEEECCCCCEECCCCCCEEEEECCEEEEEEEEEEHHHCCCEEEEEEEEEECC KIDLQTRKLKISSDNEDINLVVKGQPSYTVEEEMDATRPYLKHIYVTINNLEYEFTDYTS EECEEEEEEEEECCCCCEEEEEECCCCEEEHHHHHCCCCEEEEEEEEEECEEEEECCCCC VPGYPLEYVVKGSLTMERKINTQIPDEDQAIEW CCCCCEEEEEECCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA