| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348883
Identifier: 29348883
GI number: 29348883
Start: 4473346
End: 4475391
Strand: Reverse
Name: 29348883
Synonym: BT_3474
Alternate gene names: NA
Gene position: 4475391-4473346 (Counterclockwise)
Preceding gene: 29348884
Following gene: 29348882
Centisome position: 71.49
GC content: 41.01
Gene sequence:
>2046_bases ATGAAGAAAATATACATTATTTTATCATTTATAATAGGGATAGGATTTACCCTCAGTTCATGTTCCGATTACTTGGACTC TGATTATCTATTTGATGAGCGTATGTCAATAGAAGATGTTTTTACAAGCAGAGCTTATTCTGACAAATGGCTGGCACGCG CATACTTCTTTTTGGGAGATAACCATCTTCTCGATGTAGCCAGTAAAGGATATGTTCCTTTCTGTTTTGCTGATGACATG TATTTCGGTGATCGAGATGACCGATATAAAGCATGGAAAAACGGTGAATATAACGAAGGAGGTTTAGCAGGAGAAAGTGC AGAAATCTGGAACAAATGTTATAAAGGCATTCGCCAAGCCTCTATATATTTGAACAATATAGACATGAATACGGAATATA CAGCGGAAGAAATTGCTGACAACAAAGCACAAGCGCACTTTTTGAAAGCCTATTTCTACTGGATTATGTTGCGCTTGTTC GGTCCTGTTCCTATTGTGCCGGATCAAGGCATTGACTACATGGAAGATTATGATGCAGTAGCACAACCGCGTAATACGTA TGACGAATGTGTGACCTATATCACAAATGAATTAGTTCTGGCTGCGCAAGCTCTCCCTTTAGACCGTGCAATACAAGAAA TAGCTCGCCCCACCCGTGGTGCGGCATTAGCTCTTCGTGCCAAAGTTCTGCTATATGCTGCCAGCCCATTAATGAATGGA CAAACGCCTGCTGATATTGCTTCAGAACTGGTAGATGATCAAGGTAATCGACTGTTACCAGAAGCTTACGATGAATCTAA GTGGGCGAAAGCTGCTGCCGCTGCCAAGGATGTGATAGAATTGAACCGTTACACGCTGTTTGTTTCTTATGCTACAGACA AAGGGGATATTGCATTTCCTGCAACGATTGCTCCTCCATACCACCCTGAATTCTCAGAACAAGCTTGGCCGAATGGGTGG AAAGACATCGATCCGTTCGAATCTTATCGTGCTATATTCAACGGAACAGTCAGTGCTTTTGAGAATAAAGAATTAATTTT TACCCGTGGGCAGAATACTGGTGACCAAAGCATTAATAACATGGTAATACATCAGCTACCACGTGTTGCTAAAGGATGGA ATACACACGGACTTACACAGAAACAATGTGACGCATATTATATGAATGATGGAACTGATTGTCCCGGTAAAGATAAAGAA ATCAACCGCGGTGACGGTTCGGAACGCATGTCCGGCTATGTGACGAAAGAAGACGTAGAAGCAGGTCGTTACAAACCTTT GTCAGAAGGCGTCTCTTTACAGTATGCTAATCGTGAGCCCCGTTTCTATGCTTCAGTAGCCTACAATGGTGATGTTTGGA ATTTGTTGAACAGCAATAAAAATGCAGGAGAACCTCAAAACATACAAGTCTTCTATTACCGTGGAGACGGTAATGGGTAT ACAAACTCGATGTTTTGGTTACGCACCGGCATTGGAGTTAAAAAATTTGTACACCCGGATGATATGGGTAAAGGAGACAA CAATGAAGAACTTATTAAAAAGAAAGTAGAACCGGCTATCCGTTATGCAGAAGTTCTGTTGATTTATGCCGAAGCATTGA ACGAATTAAACGGGCAATACGACATACCTTCTTGGGATGGTAATAAGACTCATATAATCAAACGCGATATCAATGAAATG AAAAAAGGAATTCGTCCTATACGTATTCGTGCAGGAGTTCCTGATTATACCCAAGAAGAATATGATGACCCTATCGAATT CCGCAAAAAGTTAAAACGTGAACGTCAGATTGAATTGATGGGAGAAGGACATCGCTATTTTGATTTACGTCGTTGGCTAG ATGCTCCGGTAGAAGAATCAACTCCAATTTATGGGTGTAACACTTTAGCAACTAAAGAAATGGCAGATGTATTCCATACA CCGGTAGCAGTACCTTCATTACCAACAACCTTCTCACGCAAAATGTGGTTTTGGCCAATCAATCATACTGAATTAAAGCG CAACAAACGTTTAACTCAAAATCCAGGCTGGACTTATCCGGAATAA
Upstream 100 bases:
>100_bases TGGGACCCGGAAATGGGAAGTACGGATGGAAAGAGATATCCGCTCAGCAAAAATTTATCTTTAGGAATATCCGTTAATTT ATAATACACGCAATGACATT
Downstream 100 bases:
>100_bases TCTTATAAACTTGAAAAAAATGAAAAAGATATATTATTTACTCTTAGCCATGACTGTACTGATAGTATGTGCGTCATGCA ATAATGAATGGGAATCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MKKIYIILSFIIGIGFTLSSCSDYLDSDYLFDERMSIEDVFTSRAYSDKWLARAYFFLGDNHLLDVASKGYVPFCFADDM YFGDRDDRYKAWKNGEYNEGGLAGESAEIWNKCYKGIRQASIYLNNIDMNTEYTAEEIADNKAQAHFLKAYFYWIMLRLF GPVPIVPDQGIDYMEDYDAVAQPRNTYDECVTYITNELVLAAQALPLDRAIQEIARPTRGAALALRAKVLLYAASPLMNG QTPADIASELVDDQGNRLLPEAYDESKWAKAAAAAKDVIELNRYTLFVSYATDKGDIAFPATIAPPYHPEFSEQAWPNGW KDIDPFESYRAIFNGTVSAFENKELIFTRGQNTGDQSINNMVIHQLPRVAKGWNTHGLTQKQCDAYYMNDGTDCPGKDKE INRGDGSERMSGYVTKEDVEAGRYKPLSEGVSLQYANREPRFYASVAYNGDVWNLLNSNKNAGEPQNIQVFYYRGDGNGY TNSMFWLRTGIGVKKFVHPDDMGKGDNNEELIKKKVEPAIRYAEVLLIYAEALNELNGQYDIPSWDGNKTHIIKRDINEM KKGIRPIRIRAGVPDYTQEEYDDPIEFRKKLKRERQIELMGEGHRYFDLRRWLDAPVEESTPIYGCNTLATKEMADVFHT PVAVPSLPTTFSRKMWFWPINHTELKRNKRLTQNPGWTYPE
Sequences:
>Translated_681_residues MKKIYIILSFIIGIGFTLSSCSDYLDSDYLFDERMSIEDVFTSRAYSDKWLARAYFFLGDNHLLDVASKGYVPFCFADDM YFGDRDDRYKAWKNGEYNEGGLAGESAEIWNKCYKGIRQASIYLNNIDMNTEYTAEEIADNKAQAHFLKAYFYWIMLRLF GPVPIVPDQGIDYMEDYDAVAQPRNTYDECVTYITNELVLAAQALPLDRAIQEIARPTRGAALALRAKVLLYAASPLMNG QTPADIASELVDDQGNRLLPEAYDESKWAKAAAAAKDVIELNRYTLFVSYATDKGDIAFPATIAPPYHPEFSEQAWPNGW KDIDPFESYRAIFNGTVSAFENKELIFTRGQNTGDQSINNMVIHQLPRVAKGWNTHGLTQKQCDAYYMNDGTDCPGKDKE INRGDGSERMSGYVTKEDVEAGRYKPLSEGVSLQYANREPRFYASVAYNGDVWNLLNSNKNAGEPQNIQVFYYRGDGNGY TNSMFWLRTGIGVKKFVHPDDMGKGDNNEELIKKKVEPAIRYAEVLLIYAEALNELNGQYDIPSWDGNKTHIIKRDINEM KKGIRPIRIRAGVPDYTQEEYDDPIEFRKKLKRERQIELMGEGHRYFDLRRWLDAPVEESTPIYGCNTLATKEMADVFHT PVAVPSLPTTFSRKMWFWPINHTELKRNKRLTQNPGWTYPE >Mature_681_residues MKKIYIILSFIIGIGFTLSSCSDYLDSDYLFDERMSIEDVFTSRAYSDKWLARAYFFLGDNHLLDVASKGYVPFCFADDM YFGDRDDRYKAWKNGEYNEGGLAGESAEIWNKCYKGIRQASIYLNNIDMNTEYTAEEIADNKAQAHFLKAYFYWIMLRLF GPVPIVPDQGIDYMEDYDAVAQPRNTYDECVTYITNELVLAAQALPLDRAIQEIARPTRGAALALRAKVLLYAASPLMNG QTPADIASELVDDQGNRLLPEAYDESKWAKAAAAAKDVIELNRYTLFVSYATDKGDIAFPATIAPPYHPEFSEQAWPNGW KDIDPFESYRAIFNGTVSAFENKELIFTRGQNTGDQSINNMVIHQLPRVAKGWNTHGLTQKQCDAYYMNDGTDCPGKDKE INRGDGSERMSGYVTKEDVEAGRYKPLSEGVSLQYANREPRFYASVAYNGDVWNLLNSNKNAGEPQNIQVFYYRGDGNGY TNSMFWLRTGIGVKKFVHPDDMGKGDNNEELIKKKVEPAIRYAEVLLIYAEALNELNGQYDIPSWDGNKTHIIKRDINEM KKGIRPIRIRAGVPDYTQEEYDDPIEFRKKLKRERQIELMGEGHRYFDLRRWLDAPVEESTPIYGCNTLATKEMADVFHT PVAVPSLPTTFSRKMWFWPINHTELKRNKRLTQNPGWTYPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77925; Mature: 77925
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIYIILSFIIGIGFTLSSCSDYLDSDYLFDERMSIEDVFTSRAYSDKWLARAYFFLGD CCEEEEHHHHHHHHCCHHHHHHHHHCCCCCHHCCCCHHHHHHHHCCCHHHHHHHHEEECC NHLLDVASKGYVPFCFADDMYFGDRDDRYKAWKNGEYNEGGLAGESAEIWNKCYKGIRQA CEEEEHHCCCCEEEEEECCCEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SIYLNNIDMNTEYTAEEIADNKAQAHFLKAYFYWIMLRLFGPVPIVPDQGIDYMEDYDAV EEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH AQPRNTYDECVTYITNELVLAAQALPLDRAIQEIARPTRGAALALRAKVLLYAASPLMNG CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC QTPADIASELVDDQGNRLLPEAYDESKWAKAAAAAKDVIELNRYTLFVSYATDKGDIAFP CCHHHHHHHHHCCCCCCCCCCHHCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEC ATIAPPYHPEFSEQAWPNGWKDIDPFESYRAIFNGTVSAFENKELIFTRGQNTGDQSINN EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCEEEEECCCCCCHHHHHH MVIHQLPRVAKGWNTHGLTQKQCDAYYMNDGTDCPGKDKEINRGDGSERMSGYVTKEDVE HHHHHHHHHHCCCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHC AGRYKPLSEGVSLQYANREPRFYASVAYNGDVWNLLNSNKNAGEPQNIQVFYYRGDGNGY CCCCCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCEEEEEEECCCCCC TNSMFWLRTGIGVKKFVHPDDMGKGDNNEELIKKKVEPAIRYAEVLLIYAEALNELNGQY CCCEEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DIPSWDGNKTHIIKRDINEMKKGIRPIRIRAGVPDYTQEEYDDPIEFRKKLKRERQIELM CCCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHEEEEE GEGHRYFDLRRWLDAPVEESTPIYGCNTLATKEMADVFHTPVAVPSLPTTFSRKMWFWPI CCCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC NHTELKRNKRLTQNPGWTYPE CHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKKIYIILSFIIGIGFTLSSCSDYLDSDYLFDERMSIEDVFTSRAYSDKWLARAYFFLGD CCEEEEHHHHHHHHCCHHHHHHHHHCCCCCHHCCCCHHHHHHHHCCCHHHHHHHHEEECC NHLLDVASKGYVPFCFADDMYFGDRDDRYKAWKNGEYNEGGLAGESAEIWNKCYKGIRQA CEEEEHHCCCCEEEEEECCCEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SIYLNNIDMNTEYTAEEIADNKAQAHFLKAYFYWIMLRLFGPVPIVPDQGIDYMEDYDAV EEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH AQPRNTYDECVTYITNELVLAAQALPLDRAIQEIARPTRGAALALRAKVLLYAASPLMNG CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC QTPADIASELVDDQGNRLLPEAYDESKWAKAAAAAKDVIELNRYTLFVSYATDKGDIAFP CCHHHHHHHHHCCCCCCCCCCHHCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEC ATIAPPYHPEFSEQAWPNGWKDIDPFESYRAIFNGTVSAFENKELIFTRGQNTGDQSINN EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCEEEEECCCCCCHHHHHH MVIHQLPRVAKGWNTHGLTQKQCDAYYMNDGTDCPGKDKEINRGDGSERMSGYVTKEDVE HHHHHHHHHHCCCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHC AGRYKPLSEGVSLQYANREPRFYASVAYNGDVWNLLNSNKNAGEPQNIQVFYYRGDGNGY CCCCCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCEEEEEEECCCCCC TNSMFWLRTGIGVKKFVHPDDMGKGDNNEELIKKKVEPAIRYAEVLLIYAEALNELNGQY CCCEEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DIPSWDGNKTHIIKRDINEMKKGIRPIRIRAGVPDYTQEEYDDPIEFRKKLKRERQIELM CCCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHEEEEE GEGHRYFDLRRWLDAPVEESTPIYGCNTLATKEMADVFHTPVAVPSLPTTFSRKMWFWPI CCCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC NHTELKRNKRLTQNPGWTYPE CHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA