| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348863
Identifier: 29348863
GI number: 29348863
Start: 4450790
End: 4451146
Strand: Reverse
Name: 29348863
Synonym: BT_3454
Alternate gene names: NA
Gene position: 4451146-4450790 (Counterclockwise)
Preceding gene: 29348864
Following gene: 29348862
Centisome position: 71.1
GC content: 43.14
Gene sequence:
>357_bases ATGGAAGAAGAAGCAGTAAACAAAAAAGCAGAAGAGGGCAAAAAGAAAAAACGCACCTCATTGAAAAGTATTCTGGGAGG AGATATCCTCGCCACAGACTTTTTCCGCCGGCAGACGAAGCTGTTGGTGCTGATTATGGTATTCATCATCTTCTACATCC ATAACCGCTATGCGAGCCAGCAACAACAGATCGAGATCGACCGGTTGAAAAAAGAATTAATCGACATTAAATACGATGCG TTGACCCGTAGTTCGGAGCTGATGGAGAAAAGCCGTCAGTCACGCATCGAAGAGTATATATCAAACAAGGAAAGTGATTT GCAGACCTCTACCAACCCGCCTTACCTTATTAAATAA
Upstream 100 bases:
>100_bases TCAACAATAAAGTGATTGTCCCCGATGAAGCGGAGATAGAAAGAAATCCACGGTCGAGAAGTGCCAAATTACGAATCGCA GAGAAGAAATAATCTCAGAT
Downstream 100 bases:
>100_bases GGTGTAAGTGGAGAGTCTTAAAAGAGAATAAGCACTGTGGCAGTAAATAAGAAAAATATAATGACCCGTTACTTCTTTGT CATTCTGATCATGGCACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MEEEAVNKKAEEGKKKKRTSLKSILGGDILATDFFRRQTKLLVLIMVFIIFYIHNRYASQQQQIEIDRLKKELIDIKYDA LTRSSELMEKSRQSRIEEYISNKESDLQTSTNPPYLIK
Sequences:
>Translated_118_residues MEEEAVNKKAEEGKKKKRTSLKSILGGDILATDFFRRQTKLLVLIMVFIIFYIHNRYASQQQQIEIDRLKKELIDIKYDA LTRSSELMEKSRQSRIEEYISNKESDLQTSTNPPYLIK >Mature_118_residues MEEEAVNKKAEEGKKKKRTSLKSILGGDILATDFFRRQTKLLVLIMVFIIFYIHNRYASQQQQIEIDRLKKELIDIKYDA LTRSSELMEKSRQSRIEEYISNKESDLQTSTNPPYLIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13915; Mature: 13915
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEEAVNKKAEEGKKKKRTSLKSILGGDILATDFFRRQTKLLVLIMVFIIFYIHNRYASQ CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQIEIDRLKKELIDIKYDALTRSSELMEKSRQSRIEEYISNKESDLQTSTNPPYLIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECC >Mature Secondary Structure MEEEAVNKKAEEGKKKKRTSLKSILGGDILATDFFRRQTKLLVLIMVFIIFYIHNRYASQ CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQIEIDRLKKELIDIKYDALTRSSELMEKSRQSRIEEYISNKESDLQTSTNPPYLIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA