| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348848
Identifier: 29348848
GI number: 29348848
Start: 4430054
End: 4431730
Strand: Reverse
Name: 29348848
Synonym: BT_3439
Alternate gene names: NA
Gene position: 4431730-4430054 (Counterclockwise)
Preceding gene: 29348849
Following gene: 29348847
Centisome position: 70.79
GC content: 35.12
Gene sequence:
>1677_bases ATGAAGAAGTTATTTATATCCCTATGTATAATATTGTTCACAATATCATGCACTAATGAGGAGGAAACTAATAATTATAC TCCGGTAGATAATCAAAGCAATTCCACATCAGAAATCATCTTGCAAGAACGTAACTCTAGTTTACCTAGAGTGTGGTCGA AAAAAACAGCCCAAAGAGTCACGACAAGAGCATCCTTCACCGATGCTACAGACTTCCTTGGATGCTCTTATGCAGTAGAA AATGGAACTTCTATTATCGGTGATTTCGCTAACGCCAAATACCCGGTTGTCAACATGAAGAAGTTACTCGAAAGGTACCC TTCATACATCAATCCCAAAGAACTAAGAACAACAGAGACAAAGGCTTTATCTTATTCTGATTTCGATCGTTTAGAGAAGA ATAAAACTTTCACTAAAACAGTAAAGTCCGGTTTTTCTCTAAATCTTGGACCATTCAAATTTGGAAGACAAAAAACTATC AAAGAGACCTTTGTCCATAATACAGATGATAGTGAGAAGGTAGTCCATGGAGAACTCAGTATAGAGGTAGTCAATGGAAT GTTAAACTTGCAAACAGCACCTAGTGCATTGAGAAAAATTGCAGCTGATTATTTAGATGAATTATTCGTAGATGCATTAT ATAATTCATCTATGGTGGAATTAATGCAAAGTTATGGAGAATTTGTCCTAACTGGCTACTATACAGGAGGACGGGCTTCA GCACTTTTTTACGGAGTTGACACAAATAGTATACAATTCGACAGCAAAGAGAAAGATATGGATGTAGCGATAAATGCATC CTATGAATGGAAAAATAAAAAGCCAACAGCTCCAAGCGACACAATTCATTCTGCTTCAGGAAACTTATCCATTGGAACAA AGAGAGAAAACTCAGAAACAATAACCAACAAATTCTCCGCATTATCATATTCCATCAAAACTCTTGGTGGAGCGTATGGT TACAGCATTTCAACTCCCCCCTATGATATTACGAACTATTCTATTGATTTAACCCCTTGGCTGCAATCGTTAAACGATCC CAAAACACATACTATGATTGATCTGCAAGATGGTGGACTATATCCCATATCCGATTTTATTTTGGAAGAGAATTTTAAAC AAAGATATAATGATACTCACATGGACTTTCAATATCAAGAGAGTCTTGAAGAACCATATATAGAGATTATAAAGATGTAT ATTCGCAAAAGCAATTCGGGAGAAAAATTATATGATATTGTTCCTGTGCTCAATACAAGACAAGGAGATAAGCTTATATT CTCGAACCCAGATGCTGCTAGTCAATCCGATGAAGAATTAAAAGCTAACAGCATTCCCGCAACATTTCTTACCAAAAGTA ATGCAATAAAAGATGAGAAAAGTAAATACTACCAATTAAAAATTAAAGCAGATCCCAATAAGACTATAAATCCAATTATA CAGACTACTCTTTCATTCCAGATAAACAATGTGGATGAGAAAGGTATGTACAAGTTCAAAAATGCCAACACTAATATTTG GTACATATATAATCCAACATCTATGTATTGCTTTGCATACTATGATGATGACTATATTCCTGATGCATATGGAATATTAG ATTGGGTAAACGGCATCCCCATTAAGGCAGTTACTATGACAACTCTGTATCAGAGATACAAAATATATGGTTTGTAG
Upstream 100 bases:
>100_bases TGAAGAAGTAAACTTAGATACTCAACGAAGTGCAAAAGGAAAAGCTAACATCAAAAACGTTACTCAATCATCACCACTCA CTTTTTAAATTATACGCAAA
Downstream 100 bases:
>100_bases TAACAATAAACAGAATTAATGTTCCTAATAAACATAGATTTATTAGGAACATTAATAATAAAACATTATCTTTATTCAGA CTTAACAAATAACTATTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MKKLFISLCIILFTISCTNEEETNNYTPVDNQSNSTSEIILQERNSSLPRVWSKKTAQRVTTRASFTDATDFLGCSYAVE NGTSIIGDFANAKYPVVNMKKLLERYPSYINPKELRTTETKALSYSDFDRLEKNKTFTKTVKSGFSLNLGPFKFGRQKTI KETFVHNTDDSEKVVHGELSIEVVNGMLNLQTAPSALRKIAADYLDELFVDALYNSSMVELMQSYGEFVLTGYYTGGRAS ALFYGVDTNSIQFDSKEKDMDVAINASYEWKNKKPTAPSDTIHSASGNLSIGTKRENSETITNKFSALSYSIKTLGGAYG YSISTPPYDITNYSIDLTPWLQSLNDPKTHTMIDLQDGGLYPISDFILEENFKQRYNDTHMDFQYQESLEEPYIEIIKMY IRKSNSGEKLYDIVPVLNTRQGDKLIFSNPDAASQSDEELKANSIPATFLTKSNAIKDEKSKYYQLKIKADPNKTINPII QTTLSFQINNVDEKGMYKFKNANTNIWYIYNPTSMYCFAYYDDDYIPDAYGILDWVNGIPIKAVTMTTLYQRYKIYGL
Sequences:
>Translated_558_residues MKKLFISLCIILFTISCTNEEETNNYTPVDNQSNSTSEIILQERNSSLPRVWSKKTAQRVTTRASFTDATDFLGCSYAVE NGTSIIGDFANAKYPVVNMKKLLERYPSYINPKELRTTETKALSYSDFDRLEKNKTFTKTVKSGFSLNLGPFKFGRQKTI KETFVHNTDDSEKVVHGELSIEVVNGMLNLQTAPSALRKIAADYLDELFVDALYNSSMVELMQSYGEFVLTGYYTGGRAS ALFYGVDTNSIQFDSKEKDMDVAINASYEWKNKKPTAPSDTIHSASGNLSIGTKRENSETITNKFSALSYSIKTLGGAYG YSISTPPYDITNYSIDLTPWLQSLNDPKTHTMIDLQDGGLYPISDFILEENFKQRYNDTHMDFQYQESLEEPYIEIIKMY IRKSNSGEKLYDIVPVLNTRQGDKLIFSNPDAASQSDEELKANSIPATFLTKSNAIKDEKSKYYQLKIKADPNKTINPII QTTLSFQINNVDEKGMYKFKNANTNIWYIYNPTSMYCFAYYDDDYIPDAYGILDWVNGIPIKAVTMTTLYQRYKIYGL >Mature_558_residues MKKLFISLCIILFTISCTNEEETNNYTPVDNQSNSTSEIILQERNSSLPRVWSKKTAQRVTTRASFTDATDFLGCSYAVE NGTSIIGDFANAKYPVVNMKKLLERYPSYINPKELRTTETKALSYSDFDRLEKNKTFTKTVKSGFSLNLGPFKFGRQKTI KETFVHNTDDSEKVVHGELSIEVVNGMLNLQTAPSALRKIAADYLDELFVDALYNSSMVELMQSYGEFVLTGYYTGGRAS ALFYGVDTNSIQFDSKEKDMDVAINASYEWKNKKPTAPSDTIHSASGNLSIGTKRENSETITNKFSALSYSIKTLGGAYG YSISTPPYDITNYSIDLTPWLQSLNDPKTHTMIDLQDGGLYPISDFILEENFKQRYNDTHMDFQYQESLEEPYIEIIKMY IRKSNSGEKLYDIVPVLNTRQGDKLIFSNPDAASQSDEELKANSIPATFLTKSNAIKDEKSKYYQLKIKADPNKTINPII QTTLSFQINNVDEKGMYKFKNANTNIWYIYNPTSMYCFAYYDDDYIPDAYGILDWVNGIPIKAVTMTTLYQRYKIYGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63429; Mature: 63429
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFISLCIILFTISCTNEEETNNYTPVDNQSNSTSEIILQERNSSLPRVWSKKTAQRV CHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCHHHHHHHHHHH TTRASFTDATDFLGCSYAVENGTSIIGDFANAKYPVVNMKKLLERYPSYINPKELRTTET HHHCCCCCCHHHCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCHH KALSYSDFDRLEKNKTFTKTVKSGFSLNLGPFKFGRQKTIKETFVHNTDDSEKVVHGELS HCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEE IEVVNGMLNLQTAPSALRKIAADYLDELFVDALYNSSMVELMQSYGEFVLTGYYTGGRAS EEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCE ALFYGVDTNSIQFDSKEKDMDVAINASYEWKNKKPTAPSDTIHSASGNLSIGTKRENSET EEEEECCCCCEEECCCCCCCEEEEECEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCHH ITNKFSALSYSIKTLGGAYGYSISTPPYDITNYSIDLTPWLQSLNDPKTHTMIDLQDGGL HHHHHHHHHEEHHHCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCCCCEEEEEECCCCC YPISDFILEENFKQRYNDTHMDFQYQESLEEPYIEIIKMYIRKSNSGEKLYDIVPVLNTR CCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCC QGDKLIFSNPDAASQSDEELKANSIPATFLTKSNAIKDEKSKYYQLKIKADPNKTINPII CCCEEEEECCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHH QTTLSFQINNVDEKGMYKFKNANTNIWYIYNPTSMYCFAYYDDDYIPDAYGILDWVNGIP HEEEEEEECCCCCCCCEEEECCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHCCCC IKAVTMTTLYQRYKIYGL EEEHHHHHHHHHHHCCCC >Mature Secondary Structure MKKLFISLCIILFTISCTNEEETNNYTPVDNQSNSTSEIILQERNSSLPRVWSKKTAQRV CHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCHHHHHHHHHHH TTRASFTDATDFLGCSYAVENGTSIIGDFANAKYPVVNMKKLLERYPSYINPKELRTTET HHHCCCCCCHHHCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCHH KALSYSDFDRLEKNKTFTKTVKSGFSLNLGPFKFGRQKTIKETFVHNTDDSEKVVHGELS HCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEE IEVVNGMLNLQTAPSALRKIAADYLDELFVDALYNSSMVELMQSYGEFVLTGYYTGGRAS EEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCE ALFYGVDTNSIQFDSKEKDMDVAINASYEWKNKKPTAPSDTIHSASGNLSIGTKRENSET EEEEECCCCCEEECCCCCCCEEEEECEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCHH ITNKFSALSYSIKTLGGAYGYSISTPPYDITNYSIDLTPWLQSLNDPKTHTMIDLQDGGL HHHHHHHHHEEHHHCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCCCCEEEEEECCCCC YPISDFILEENFKQRYNDTHMDFQYQESLEEPYIEIIKMYIRKSNSGEKLYDIVPVLNTR CCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCC QGDKLIFSNPDAASQSDEELKANSIPATFLTKSNAIKDEKSKYYQLKIKADPNKTINPII CCCEEEEECCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHH QTTLSFQINNVDEKGMYKFKNANTNIWYIYNPTSMYCFAYYDDDYIPDAYGILDWVNGIP HEEEEEEECCCCCCCCEEEECCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHCCCC IKAVTMTTLYQRYKIYGL EEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA