| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348849
Identifier: 29348849
GI number: 29348849
Start: 4431743
End: 4433074
Strand: Reverse
Name: 29348849
Synonym: BT_3440
Alternate gene names: NA
Gene position: 4433074-4431743 (Counterclockwise)
Preceding gene: 29348850
Following gene: 29348848
Centisome position: 70.81
GC content: 37.91
Gene sequence:
>1332_bases ATGAAAAACATTTCTAGATTTTTAGTAGCATTGTGTTGCAGCGCACTATTTTTATTCTCATGTGAGAATGAAATTGAAAG TGAGATTCAATCCTCGTCAGAAGAATTAGTTACATCCGCAGAGACAAAGGCACTGTCAGTTGATAGTCTTGAACCACTTA AAATGACAGACGAGTTAAAAGCATTAAAAGAAAGAATGGATGAACTAAAGAAAACAAAGACTAGAGCGGCTTCCAGTAAT TACGGCCAATATTTTTCTGAGAACATGTGGGCTATTCGGGAAATGCCTTTTACATTGAGAGCAACAAGCGGAGGTTATCT TACAGCTAGTGGCAGAGGAGGGAAAGTAGATGTAGATGGCCGTAGAGCAGATATTTACAAACAATTTTATGTTACAATCC CCCCGTCAATTGTAGGAGTTCCCTATTTAATTTATTCATGCCAATCTGAAACACCTCTGGCTGTAGGTCACTATACAAGT AATCCAAACCAGAAAGTCGTATTAGCCATGACTACTAACTCCCCGAATGAGTTTTCTGCTTCTTGGGATATTATACCCGC AAGCAATAATCCGGGAGGGTACGTTATTCAAAGTGAATCGTATATCGGACAAGGAAGTGGCGGTTGGTGGGATGTTTTTA ACTATGTGGTTGAAGTACAAGGAAGCAATCTGGGTTATAGTCAATACTCACAAAAGGCAGAACAAGAGTTCACCATCACT CCCAATGCTCCATTCACTCTAAAGAAACTCGAATTTATTAATCCATATTCTGCTACCGTAATTCAAAGAGAAAATATTTC TATCCAACAAGCAACCACAAATGTTTCATTTCAAGAAAAGCGGGATAATCTGAAGTTCATTAAAGAAATGAAAGACAATT CTTATTTTGAAGAAGAGAAAGGTATTGCATTTCAAGTCCCGGCATCGGACCTAGAATTTGCACTCCCCACCGTAACATTA GGAGAAATAGACCTTGTACCTAATAATAAAGTTCCCGTTGATACGAAATATGAGCCCGGCATCCGCAGAACAGTACTGAG AACACTATATAAGGAAATTCCTGTAGCAGTCAAACCGCGTACAAAGCTCACACTGACATATTATTTTAAAGCTTATGATG TATCAGTAGATTATGTCGCTACTATCGAATATTTTAATGAAAAAGATAAAGAGATTAGAGAAGCTAAACTACCCGGACGT TGGAGCGGAAGAATATATGTTGATGAAATAGCCGAACCGGATTATGAAGAAGTAAACTTAGATACTCAACGAAGTGCAAA AGGAAAAGCTAACATCAAAAACGTTACTCAATCATCACCACTCACTTTTTAA
Upstream 100 bases:
>100_bases TCTCATTGGAGAGTTTGAAATCGAGTAGACATCAACACATATAAAGACGATTCATTTGTCCTGTCATAACGCCAATATTA ATCCTATAAAAATAATATTT
Downstream 100 bases:
>100_bases ATTATACGCAAAATGAAGAAGTTATTTATATCCCTATGTATAATATTGTTCACAATATCATGCACTAATGAGGAGGAAAC TAATAATTATACTCCGGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MKNISRFLVALCCSALFLFSCENEIESEIQSSSEELVTSAETKALSVDSLEPLKMTDELKALKERMDELKKTKTRAASSN YGQYFSENMWAIREMPFTLRATSGGYLTASGRGGKVDVDGRRADIYKQFYVTIPPSIVGVPYLIYSCQSETPLAVGHYTS NPNQKVVLAMTTNSPNEFSASWDIIPASNNPGGYVIQSESYIGQGSGGWWDVFNYVVEVQGSNLGYSQYSQKAEQEFTIT PNAPFTLKKLEFINPYSATVIQRENISIQQATTNVSFQEKRDNLKFIKEMKDNSYFEEEKGIAFQVPASDLEFALPTVTL GEIDLVPNNKVPVDTKYEPGIRRTVLRTLYKEIPVAVKPRTKLTLTYYFKAYDVSVDYVATIEYFNEKDKEIREAKLPGR WSGRIYVDEIAEPDYEEVNLDTQRSAKGKANIKNVTQSSPLTF
Sequences:
>Translated_443_residues MKNISRFLVALCCSALFLFSCENEIESEIQSSSEELVTSAETKALSVDSLEPLKMTDELKALKERMDELKKTKTRAASSN YGQYFSENMWAIREMPFTLRATSGGYLTASGRGGKVDVDGRRADIYKQFYVTIPPSIVGVPYLIYSCQSETPLAVGHYTS NPNQKVVLAMTTNSPNEFSASWDIIPASNNPGGYVIQSESYIGQGSGGWWDVFNYVVEVQGSNLGYSQYSQKAEQEFTIT PNAPFTLKKLEFINPYSATVIQRENISIQQATTNVSFQEKRDNLKFIKEMKDNSYFEEEKGIAFQVPASDLEFALPTVTL GEIDLVPNNKVPVDTKYEPGIRRTVLRTLYKEIPVAVKPRTKLTLTYYFKAYDVSVDYVATIEYFNEKDKEIREAKLPGR WSGRIYVDEIAEPDYEEVNLDTQRSAKGKANIKNVTQSSPLTF >Mature_443_residues MKNISRFLVALCCSALFLFSCENEIESEIQSSSEELVTSAETKALSVDSLEPLKMTDELKALKERMDELKKTKTRAASSN YGQYFSENMWAIREMPFTLRATSGGYLTASGRGGKVDVDGRRADIYKQFYVTIPPSIVGVPYLIYSCQSETPLAVGHYTS NPNQKVVLAMTTNSPNEFSASWDIIPASNNPGGYVIQSESYIGQGSGGWWDVFNYVVEVQGSNLGYSQYSQKAEQEFTIT PNAPFTLKKLEFINPYSATVIQRENISIQQATTNVSFQEKRDNLKFIKEMKDNSYFEEEKGIAFQVPASDLEFALPTVTL GEIDLVPNNKVPVDTKYEPGIRRTVLRTLYKEIPVAVKPRTKLTLTYYFKAYDVSVDYVATIEYFNEKDKEIREAKLPGR WSGRIYVDEIAEPDYEEVNLDTQRSAKGKANIKNVTQSSPLTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49926; Mature: 49926
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNISRFLVALCCSALFLFSCENEIESEIQSSSEELVTSAETKALSVDSLEPLKMTDELK CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCEEECCCCCCCCHHHHHH ALKERMDELKKTKTRAASSNYGQYFSENMWAIREMPFTLRATSGGYLTASGRGGKVDVDG HHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEECCCEEEEECCCCEEEECCCCCEEEECC RRADIYKQFYVTIPPSIVGVPYLIYSCQSETPLAVGHYTSNPNQKVVLAMTTNSPNEFSA CHHEEEEEEEEECCHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCC SWDIIPASNNPGGYVIQSESYIGQGSGGWWDVFNYVVEVQGSNLGYSQYSQKAEQEFTIT EEEEEECCCCCCCEEEECCCEECCCCCCHHHHEEEEEEECCCCCCHHHHHHHCCCEEEEC PNAPFTLKKLEFINPYSATVIQRENISIQQATTNVSFQEKRDNLKFIKEMKDNSYFEEEK CCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHC GIAFQVPASDLEFALPTVTLGEIDLVPNNKVPVDTKYEPGIRRTVLRTLYKEIPVAVKPR CEEEEECCCCCCEECCEEEECEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCC TKLTLTYYFKAYDVSVDYVATIEYFNEKDKEIREAKLPGRWSGRIYVDEIAEPDYEEVNL CEEEEEEEEEEEECCEEEEEEEEHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHCCC DTQRSAKGKANIKNVTQSSPLTF CCCCCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MKNISRFLVALCCSALFLFSCENEIESEIQSSSEELVTSAETKALSVDSLEPLKMTDELK CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCEEECCCCCCCCHHHHHH ALKERMDELKKTKTRAASSNYGQYFSENMWAIREMPFTLRATSGGYLTASGRGGKVDVDG HHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEECCCEEEEECCCCEEEECCCCCEEEECC RRADIYKQFYVTIPPSIVGVPYLIYSCQSETPLAVGHYTSNPNQKVVLAMTTNSPNEFSA CHHEEEEEEEEECCHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCC SWDIIPASNNPGGYVIQSESYIGQGSGGWWDVFNYVVEVQGSNLGYSQYSQKAEQEFTIT EEEEEECCCCCCCEEEECCCEECCCCCCHHHHEEEEEEECCCCCCHHHHHHHCCCEEEEC PNAPFTLKKLEFINPYSATVIQRENISIQQATTNVSFQEKRDNLKFIKEMKDNSYFEEEK CCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHC GIAFQVPASDLEFALPTVTLGEIDLVPNNKVPVDTKYEPGIRRTVLRTLYKEIPVAVKPR CEEEEECCCCCCEECCEEEECEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCC TKLTLTYYFKAYDVSVDYVATIEYFNEKDKEIREAKLPGRWSGRIYVDEIAEPDYEEVNL CEEEEEEEEEEEECCEEEEEEEEHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHCCC DTQRSAKGKANIKNVTQSSPLTF CCCCCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA