Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348849

Identifier: 29348849

GI number: 29348849

Start: 4431743

End: 4433074

Strand: Reverse

Name: 29348849

Synonym: BT_3440

Alternate gene names: NA

Gene position: 4433074-4431743 (Counterclockwise)

Preceding gene: 29348850

Following gene: 29348848

Centisome position: 70.81

GC content: 37.91

Gene sequence:

>1332_bases
ATGAAAAACATTTCTAGATTTTTAGTAGCATTGTGTTGCAGCGCACTATTTTTATTCTCATGTGAGAATGAAATTGAAAG
TGAGATTCAATCCTCGTCAGAAGAATTAGTTACATCCGCAGAGACAAAGGCACTGTCAGTTGATAGTCTTGAACCACTTA
AAATGACAGACGAGTTAAAAGCATTAAAAGAAAGAATGGATGAACTAAAGAAAACAAAGACTAGAGCGGCTTCCAGTAAT
TACGGCCAATATTTTTCTGAGAACATGTGGGCTATTCGGGAAATGCCTTTTACATTGAGAGCAACAAGCGGAGGTTATCT
TACAGCTAGTGGCAGAGGAGGGAAAGTAGATGTAGATGGCCGTAGAGCAGATATTTACAAACAATTTTATGTTACAATCC
CCCCGTCAATTGTAGGAGTTCCCTATTTAATTTATTCATGCCAATCTGAAACACCTCTGGCTGTAGGTCACTATACAAGT
AATCCAAACCAGAAAGTCGTATTAGCCATGACTACTAACTCCCCGAATGAGTTTTCTGCTTCTTGGGATATTATACCCGC
AAGCAATAATCCGGGAGGGTACGTTATTCAAAGTGAATCGTATATCGGACAAGGAAGTGGCGGTTGGTGGGATGTTTTTA
ACTATGTGGTTGAAGTACAAGGAAGCAATCTGGGTTATAGTCAATACTCACAAAAGGCAGAACAAGAGTTCACCATCACT
CCCAATGCTCCATTCACTCTAAAGAAACTCGAATTTATTAATCCATATTCTGCTACCGTAATTCAAAGAGAAAATATTTC
TATCCAACAAGCAACCACAAATGTTTCATTTCAAGAAAAGCGGGATAATCTGAAGTTCATTAAAGAAATGAAAGACAATT
CTTATTTTGAAGAAGAGAAAGGTATTGCATTTCAAGTCCCGGCATCGGACCTAGAATTTGCACTCCCCACCGTAACATTA
GGAGAAATAGACCTTGTACCTAATAATAAAGTTCCCGTTGATACGAAATATGAGCCCGGCATCCGCAGAACAGTACTGAG
AACACTATATAAGGAAATTCCTGTAGCAGTCAAACCGCGTACAAAGCTCACACTGACATATTATTTTAAAGCTTATGATG
TATCAGTAGATTATGTCGCTACTATCGAATATTTTAATGAAAAAGATAAAGAGATTAGAGAAGCTAAACTACCCGGACGT
TGGAGCGGAAGAATATATGTTGATGAAATAGCCGAACCGGATTATGAAGAAGTAAACTTAGATACTCAACGAAGTGCAAA
AGGAAAAGCTAACATCAAAAACGTTACTCAATCATCACCACTCACTTTTTAA

Upstream 100 bases:

>100_bases
TCTCATTGGAGAGTTTGAAATCGAGTAGACATCAACACATATAAAGACGATTCATTTGTCCTGTCATAACGCCAATATTA
ATCCTATAAAAATAATATTT

Downstream 100 bases:

>100_bases
ATTATACGCAAAATGAAGAAGTTATTTATATCCCTATGTATAATATTGTTCACAATATCATGCACTAATGAGGAGGAAAC
TAATAATTATACTCCGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKNISRFLVALCCSALFLFSCENEIESEIQSSSEELVTSAETKALSVDSLEPLKMTDELKALKERMDELKKTKTRAASSN
YGQYFSENMWAIREMPFTLRATSGGYLTASGRGGKVDVDGRRADIYKQFYVTIPPSIVGVPYLIYSCQSETPLAVGHYTS
NPNQKVVLAMTTNSPNEFSASWDIIPASNNPGGYVIQSESYIGQGSGGWWDVFNYVVEVQGSNLGYSQYSQKAEQEFTIT
PNAPFTLKKLEFINPYSATVIQRENISIQQATTNVSFQEKRDNLKFIKEMKDNSYFEEEKGIAFQVPASDLEFALPTVTL
GEIDLVPNNKVPVDTKYEPGIRRTVLRTLYKEIPVAVKPRTKLTLTYYFKAYDVSVDYVATIEYFNEKDKEIREAKLPGR
WSGRIYVDEIAEPDYEEVNLDTQRSAKGKANIKNVTQSSPLTF

Sequences:

>Translated_443_residues
MKNISRFLVALCCSALFLFSCENEIESEIQSSSEELVTSAETKALSVDSLEPLKMTDELKALKERMDELKKTKTRAASSN
YGQYFSENMWAIREMPFTLRATSGGYLTASGRGGKVDVDGRRADIYKQFYVTIPPSIVGVPYLIYSCQSETPLAVGHYTS
NPNQKVVLAMTTNSPNEFSASWDIIPASNNPGGYVIQSESYIGQGSGGWWDVFNYVVEVQGSNLGYSQYSQKAEQEFTIT
PNAPFTLKKLEFINPYSATVIQRENISIQQATTNVSFQEKRDNLKFIKEMKDNSYFEEEKGIAFQVPASDLEFALPTVTL
GEIDLVPNNKVPVDTKYEPGIRRTVLRTLYKEIPVAVKPRTKLTLTYYFKAYDVSVDYVATIEYFNEKDKEIREAKLPGR
WSGRIYVDEIAEPDYEEVNLDTQRSAKGKANIKNVTQSSPLTF
>Mature_443_residues
MKNISRFLVALCCSALFLFSCENEIESEIQSSSEELVTSAETKALSVDSLEPLKMTDELKALKERMDELKKTKTRAASSN
YGQYFSENMWAIREMPFTLRATSGGYLTASGRGGKVDVDGRRADIYKQFYVTIPPSIVGVPYLIYSCQSETPLAVGHYTS
NPNQKVVLAMTTNSPNEFSASWDIIPASNNPGGYVIQSESYIGQGSGGWWDVFNYVVEVQGSNLGYSQYSQKAEQEFTIT
PNAPFTLKKLEFINPYSATVIQRENISIQQATTNVSFQEKRDNLKFIKEMKDNSYFEEEKGIAFQVPASDLEFALPTVTL
GEIDLVPNNKVPVDTKYEPGIRRTVLRTLYKEIPVAVKPRTKLTLTYYFKAYDVSVDYVATIEYFNEKDKEIREAKLPGR
WSGRIYVDEIAEPDYEEVNLDTQRSAKGKANIKNVTQSSPLTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49926; Mature: 49926

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNISRFLVALCCSALFLFSCENEIESEIQSSSEELVTSAETKALSVDSLEPLKMTDELK
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCEEECCCCCCCCHHHHHH
ALKERMDELKKTKTRAASSNYGQYFSENMWAIREMPFTLRATSGGYLTASGRGGKVDVDG
HHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEECCCEEEEECCCCEEEECCCCCEEEECC
RRADIYKQFYVTIPPSIVGVPYLIYSCQSETPLAVGHYTSNPNQKVVLAMTTNSPNEFSA
CHHEEEEEEEEECCHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCC
SWDIIPASNNPGGYVIQSESYIGQGSGGWWDVFNYVVEVQGSNLGYSQYSQKAEQEFTIT
EEEEEECCCCCCCEEEECCCEECCCCCCHHHHEEEEEEECCCCCCHHHHHHHCCCEEEEC
PNAPFTLKKLEFINPYSATVIQRENISIQQATTNVSFQEKRDNLKFIKEMKDNSYFEEEK
CCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHC
GIAFQVPASDLEFALPTVTLGEIDLVPNNKVPVDTKYEPGIRRTVLRTLYKEIPVAVKPR
CEEEEECCCCCCEECCEEEECEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCC
TKLTLTYYFKAYDVSVDYVATIEYFNEKDKEIREAKLPGRWSGRIYVDEIAEPDYEEVNL
CEEEEEEEEEEEECCEEEEEEEEHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHCCC
DTQRSAKGKANIKNVTQSSPLTF
CCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MKNISRFLVALCCSALFLFSCENEIESEIQSSSEELVTSAETKALSVDSLEPLKMTDELK
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCEEECCCCCCCCHHHHHH
ALKERMDELKKTKTRAASSNYGQYFSENMWAIREMPFTLRATSGGYLTASGRGGKVDVDG
HHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEECCCEEEEECCCCEEEECCCCCEEEECC
RRADIYKQFYVTIPPSIVGVPYLIYSCQSETPLAVGHYTSNPNQKVVLAMTTNSPNEFSA
CHHEEEEEEEEECCHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCC
SWDIIPASNNPGGYVIQSESYIGQGSGGWWDVFNYVVEVQGSNLGYSQYSQKAEQEFTIT
EEEEEECCCCCCCEEEECCCEECCCCCCHHHHEEEEEEECCCCCCHHHHHHHCCCEEEEC
PNAPFTLKKLEFINPYSATVIQRENISIQQATTNVSFQEKRDNLKFIKEMKDNSYFEEEK
CCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHC
GIAFQVPASDLEFALPTVTLGEIDLVPNNKVPVDTKYEPGIRRTVLRTLYKEIPVAVKPR
CEEEEECCCCCCEECCEEEECEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCC
TKLTLTYYFKAYDVSVDYVATIEYFNEKDKEIREAKLPGRWSGRIYVDEIAEPDYEEVNL
CEEEEEEEEEEEECCEEEEEEEEHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHCCC
DTQRSAKGKANIKNVTQSSPLTF
CCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA