Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348846

Identifier: 29348846

GI number: 29348846

Start: 4427720

End: 4429381

Strand: Reverse

Name: 29348846

Synonym: BT_3437

Alternate gene names: NA

Gene position: 4429381-4427720 (Counterclockwise)

Preceding gene: 29348847

Following gene: 29348845

Centisome position: 70.75

GC content: 32.01

Gene sequence:

>1662_bases
ATGAAACAATCTAATATCTCCGCAACAATAATAATGTCAATAATATCATTTGCATCCTGCACAAATGATATTGAGAATCT
CGACATTATTCCGACAAATAATGGACAAAATACAGAAGGCAACATTATACTACAAGAAAGAAATCCAAATCTTCCCTTAC
CCTTAATAAAGAAGTTCATATTAAACAAGCCACAAACCAGAAATAGCGTTTCAGGCGAAGACAGAACCTTCCTTGGATAC
AGTTATAAAATAAAAAATGGGGATTATATACAAGGAAGCATAAATAGTTTAGGCTTTCCAATAATAGACATTGACTCTAT
AAGAAAATATAGACCTTCTTATCTACAAGAGAAACTTATAACTGTAACAGAGACTAATATTTTCACTTATAATAATCTCG
ACAAATACTTGTATGATTCAAGATTTGGCAAAAAGGTATCATCTGAGTTTACTTTCAATCCTAAAGTTTTCGCAACAGAA
AAAAAGGAAGCAATCACAAAGTTATTCGGTAATATAGAAAAAGCTACTTATGGTAAACTCGAAGTTTCTTTTCTAAAAGG
GCAATCCACATTAAATCATTTACCAAGTTCAAGACTATGGTATATAAGCCAATTTCAGAATCATATTTTCACAAATATCC
TATATAATGCCCCAATGGCATCCATACTTAACGAATTTGGTGAATTCATATTAACAGATTATTTTACAGGAGGAAAGGTT
TATGCCTTATTCGCAAGCAAAGCCAAAGAAGGGACAACCGCTCAACAAAAAGAAGATGACATGTATACTTCTATAAACAC
TTCAGTAATTAACCTCAATAACGCTACTAGTATTAATTTAGGTTTCAACGGTTCCAACTTTGACGCAACAAAAACCTTTA
AAAGTACAGATACTTATTTAGATATGAAAACATTTGGAGGGGAAGTAAGTCAAAGCGTAGCAATAAATACAAAAGTTTCT
AATATCAATATAGACTTAACACCGTGGAGATATTCTTTAAAAGACATGGCTAACAATACAATGATAGATATAGCAGACAA
TAGCCTGTATCCTCTATCAGCCTTTGTACTCGAGCAAAATTTCAAACAACGCCTTGATGACACCTTCAACGAGATACTAC
CTGCGAACAAAGAGCTAGTACCTCCACGCATTGAAATCGTGAGAGTTCTCGCCCGTACAACACCTTCCAATGAAGCTCTT
TATGATGTAGCAGCCGTTTTAGTTACAAGGCAAACAGATAGAATAATATTGAGTGACGCTATGGCGTCATCCGCTACAGA
TGAAGAATTAAGAAAAAATGAGAACAATGAAGTTTTCATGCAGAAAGTAGAAAAAATAGCAACTGAAAAATCTAAGTTTT
TTAGTTCTGACATAGAAATATCATATAATAAAGAGACTAAACTGAATCCTACTTTAAAATCACCATTATGCATAGAACTA
ACAGGATTTAATGAAAGAAACTTTTATAGATTTTATTATGAAAAGACTAATATTGAATATATTTACGATCCTGCTACTCA
TCTTTGCTTATCATATTACATAAATAAAGGGGACGATAGAATCTTAGATATCTATGGCATTAGAAACTGGATAGAATCAC
TACCTGAAAAGAAAATATCAATAACAACATTAGCAAATTCATATAAAATCATTGGATTATAG

Upstream 100 bases:

>100_bases
GGAGTCTTACATCTGTCTAATAGCAGATGCATTATTCCTTTTTATTACTATCAAAATCTTCTTATTAATAAAATTCACCA
AAGTATCAACCATAAGAAAC

Downstream 100 bases:

>100_bases
ACATTGAGGATAATCGCTAAAACACGAAATCAAGTAGACATCAACTCATATAAAGACAATAATTCATTTGTCCTGTTAGA
GTTGAAAACAGATGCTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKQSNISATIIMSIISFASCTNDIENLDIIPTNNGQNTEGNIILQERNPNLPLPLIKKFILNKPQTRNSVSGEDRTFLGY
SYKIKNGDYIQGSINSLGFPIIDIDSIRKYRPSYLQEKLITVTETNIFTYNNLDKYLYDSRFGKKVSSEFTFNPKVFATE
KKEAITKLFGNIEKATYGKLEVSFLKGQSTLNHLPSSRLWYISQFQNHIFTNILYNAPMASILNEFGEFILTDYFTGGKV
YALFASKAKEGTTAQQKEDDMYTSINTSVINLNNATSINLGFNGSNFDATKTFKSTDTYLDMKTFGGEVSQSVAINTKVS
NINIDLTPWRYSLKDMANNTMIDIADNSLYPLSAFVLEQNFKQRLDDTFNEILPANKELVPPRIEIVRVLARTTPSNEAL
YDVAAVLVTRQTDRIILSDAMASSATDEELRKNENNEVFMQKVEKIATEKSKFFSSDIEISYNKETKLNPTLKSPLCIEL
TGFNERNFYRFYYEKTNIEYIYDPATHLCLSYYINKGDDRILDIYGIRNWIESLPEKKISITTLANSYKIIGL

Sequences:

>Translated_553_residues
MKQSNISATIIMSIISFASCTNDIENLDIIPTNNGQNTEGNIILQERNPNLPLPLIKKFILNKPQTRNSVSGEDRTFLGY
SYKIKNGDYIQGSINSLGFPIIDIDSIRKYRPSYLQEKLITVTETNIFTYNNLDKYLYDSRFGKKVSSEFTFNPKVFATE
KKEAITKLFGNIEKATYGKLEVSFLKGQSTLNHLPSSRLWYISQFQNHIFTNILYNAPMASILNEFGEFILTDYFTGGKV
YALFASKAKEGTTAQQKEDDMYTSINTSVINLNNATSINLGFNGSNFDATKTFKSTDTYLDMKTFGGEVSQSVAINTKVS
NINIDLTPWRYSLKDMANNTMIDIADNSLYPLSAFVLEQNFKQRLDDTFNEILPANKELVPPRIEIVRVLARTTPSNEAL
YDVAAVLVTRQTDRIILSDAMASSATDEELRKNENNEVFMQKVEKIATEKSKFFSSDIEISYNKETKLNPTLKSPLCIEL
TGFNERNFYRFYYEKTNIEYIYDPATHLCLSYYINKGDDRILDIYGIRNWIESLPEKKISITTLANSYKIIGL
>Mature_553_residues
MKQSNISATIIMSIISFASCTNDIENLDIIPTNNGQNTEGNIILQERNPNLPLPLIKKFILNKPQTRNSVSGEDRTFLGY
SYKIKNGDYIQGSINSLGFPIIDIDSIRKYRPSYLQEKLITVTETNIFTYNNLDKYLYDSRFGKKVSSEFTFNPKVFATE
KKEAITKLFGNIEKATYGKLEVSFLKGQSTLNHLPSSRLWYISQFQNHIFTNILYNAPMASILNEFGEFILTDYFTGGKV
YALFASKAKEGTTAQQKEDDMYTSINTSVINLNNATSINLGFNGSNFDATKTFKSTDTYLDMKTFGGEVSQSVAINTKVS
NINIDLTPWRYSLKDMANNTMIDIADNSLYPLSAFVLEQNFKQRLDDTFNEILPANKELVPPRIEIVRVLARTTPSNEAL
YDVAAVLVTRQTDRIILSDAMASSATDEELRKNENNEVFMQKVEKIATEKSKFFSSDIEISYNKETKLNPTLKSPLCIEL
TGFNERNFYRFYYEKTNIEYIYDPATHLCLSYYINKGDDRILDIYGIRNWIESLPEKKISITTLANSYKIIGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62992; Mature: 62992

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSNISATIIMSIISFASCTNDIENLDIIPTNNGQNTEGNIILQERNPNLPLPLIKKFI
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHH
LNKPQTRNSVSGEDRTFLGYSYKIKNGDYIQGSINSLGFPIIDIDSIRKYRPSYLQEKLI
CCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECHHCCCCCEEEHHHHHHCCHHHHHHHEE
TVTETNIFTYNNLDKYLYDSRFGKKVSSEFTFNPKVFATEKKEAITKLFGNIEKATYGKL
EEEECEEEEECCCHHHHHHHHHCCHHCCCEECCCEEEECCHHHHHHHHHCCCCCCCCCEE
EVSFLKGQSTLNHLPSSRLWYISQFQNHIFTNILYNAPMASILNEFGEFILTDYFTGGKV
EEEEECCCHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEHHCCCCCEE
YALFASKAKEGTTAQQKEDDMYTSINTSVINLNNATSINLGFNGSNFDATKTFKSTDTYL
EEEEECCCCCCCCCHHHCCCHHEECCCEEEEECCCEEEEECCCCCCCCCCEEECCCCCEE
DMKTFGGEVSQSVAINTKVSNINIDLTPWRYSLKDMANNTMIDIADNSLYPLSAFVLEQN
EHHHCCCCCCCEEEEEEEEEEEEEEECCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH
FKQRLDDTFNEILPANKELVPPRIEIVRVLARTTPSNEALYDVAAVLVTRQTDRIILSDA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEHH
MASSATDEELRKNENNEVFMQKVEKIATEKSKFFSSDIEISYNKETKLNPTLKSPLCIEL
HHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEE
TGFNERNFYRFYYEKTNIEYIYDPATHLCLSYYINKGDDRILDIYGIRNWIESLPEKKIS
ECCCCCCEEEEEEEECCCEEEECCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCEEE
ITTLANSYKIIGL
EEEECCCEEEEEC
>Mature Secondary Structure
MKQSNISATIIMSIISFASCTNDIENLDIIPTNNGQNTEGNIILQERNPNLPLPLIKKFI
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHH
LNKPQTRNSVSGEDRTFLGYSYKIKNGDYIQGSINSLGFPIIDIDSIRKYRPSYLQEKLI
CCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECHHCCCCCEEEHHHHHHCCHHHHHHHEE
TVTETNIFTYNNLDKYLYDSRFGKKVSSEFTFNPKVFATEKKEAITKLFGNIEKATYGKL
EEEECEEEEECCCHHHHHHHHHCCHHCCCEECCCEEEECCHHHHHHHHHCCCCCCCCCEE
EVSFLKGQSTLNHLPSSRLWYISQFQNHIFTNILYNAPMASILNEFGEFILTDYFTGGKV
EEEEECCCHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEHHCCCCCEE
YALFASKAKEGTTAQQKEDDMYTSINTSVINLNNATSINLGFNGSNFDATKTFKSTDTYL
EEEEECCCCCCCCCHHHCCCHHEECCCEEEEECCCEEEEECCCCCCCCCCEEECCCCCEE
DMKTFGGEVSQSVAINTKVSNINIDLTPWRYSLKDMANNTMIDIADNSLYPLSAFVLEQN
EHHHCCCCCCCEEEEEEEEEEEEEEECCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH
FKQRLDDTFNEILPANKELVPPRIEIVRVLARTTPSNEALYDVAAVLVTRQTDRIILSDA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEHH
MASSATDEELRKNENNEVFMQKVEKIATEKSKFFSSDIEISYNKETKLNPTLKSPLCIEL
HHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEE
TGFNERNFYRFYYEKTNIEYIYDPATHLCLSYYINKGDDRILDIYGIRNWIESLPEKKIS
ECCCCCCEEEEEEEECCCEEEECCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCEEE
ITTLANSYKIIGL
EEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA