Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348845

Identifier: 29348845

GI number: 29348845

Start: 4427127

End: 4427561

Strand: Reverse

Name: 29348845

Synonym: BT_3436

Alternate gene names: NA

Gene position: 4427561-4427127 (Counterclockwise)

Preceding gene: 29348846

Following gene: 29348844

Centisome position: 70.72

GC content: 37.24

Gene sequence:

>435_bases
ATGAAATATAATATAAAACAGTCCTCTTTATTGATGCTCTTCGCTTTGTTTTTAGTAGCTTTTTGCTTTATAGCTTGTGA
TGATCAGGACAATGAAGAGCAGGAACAGGTGGGGCAACTCACTCCCGAAGCTCTCTATCAAACTTCATGGCGTGGCACCG
GACATTGTGCCGCATGGAGTTTGAAAGATAGAGGTATCGGTATACAATTCGTAGATACCCAAAAAGGAAAAGTGGTTTGG
GAAGATTATGATGAATTTGATATTACCTACATGATAGAAGGGAGCTATATTACATTTAATGATATTGCGTTTCAACTTGC
CGGGGCTCCTTGGGTAATTAAAAGTTATACCAAAAATCACATAACTCTTATACAAAATGAAGCTAGTCCTGATAAAGATA
AAATAGCTACAATAGAGTTGGATAGGGTAGACTAA

Upstream 100 bases:

>100_bases
ATAATTCATTTGTCCTGTTAGAGTTGAAAACAGATGCTTATGTATGTAAGAATCATGTTAATATATAAACTATTTTTGTA
AATTGAAAACTTAATTAGAT

Downstream 100 bases:

>100_bases
TTCTTTAAAAGATATAGTTTGAGGTTATAAATTCCTCTTTCAAGTTGTATTGATAATGGAATGCATTTAACAATTAGTAA
AGTGCTATATTATAACTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKYNIKQSSLLMLFALFLVAFCFIACDDQDNEEQEQVGQLTPEALYQTSWRGTGHCAAWSLKDRGIGIQFVDTQKGKVVW
EDYDEFDITYMIEGSYITFNDIAFQLAGAPWVIKSYTKNHITLIQNEASPDKDKIATIELDRVD

Sequences:

>Translated_144_residues
MKYNIKQSSLLMLFALFLVAFCFIACDDQDNEEQEQVGQLTPEALYQTSWRGTGHCAAWSLKDRGIGIQFVDTQKGKVVW
EDYDEFDITYMIEGSYITFNDIAFQLAGAPWVIKSYTKNHITLIQNEASPDKDKIATIELDRVD
>Mature_144_residues
MKYNIKQSSLLMLFALFLVAFCFIACDDQDNEEQEQVGQLTPEALYQTSWRGTGHCAAWSLKDRGIGIQFVDTQKGKVVW
EDYDEFDITYMIEGSYITFNDIAFQLAGAPWVIKSYTKNHITLIQNEASPDKDKIATIELDRVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16488; Mature: 16488

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNIKQSSLLMLFALFLVAFCFIACDDQDNEEQEQVGQLTPEALYQTSWRGTGHCAAWS
CCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCHHHHHHCCCCCCCCEEEEE
LKDRGIGIQFVDTQKGKVVWEDYDEFDITYMIEGSYITFNDIAFQLAGAPWVIKSYTKNH
ECCCCCEEEEEECCCCEEEECCCCCCEEEEEEECCEEEEHHEEEEECCCCEEEECCCCCE
ITLIQNEASPDKDKIATIELDRVD
EEEEECCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MKYNIKQSSLLMLFALFLVAFCFIACDDQDNEEQEQVGQLTPEALYQTSWRGTGHCAAWS
CCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCHHHHHHCCCCCCCCEEEEE
LKDRGIGIQFVDTQKGKVVWEDYDEFDITYMIEGSYITFNDIAFQLAGAPWVIKSYTKNH
ECCCCCEEEEEECCCCEEEECCCCCCEEEEEEECCEEEEHHEEEEECCCCEEEECCCCCE
ITLIQNEASPDKDKIATIELDRVD
EEEEECCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA