| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348778
Identifier: 29348778
GI number: 29348778
Start: 4345482
End: 4346723
Strand: Reverse
Name: 29348778
Synonym: BT_3369
Alternate gene names: NA
Gene position: 4346723-4345482 (Counterclockwise)
Preceding gene: 29348781
Following gene: 29348770
Centisome position: 69.43
GC content: 32.93
Gene sequence:
>1242_bases ATGAGTAAGGAAAATATAGCATTTGTTGTTGTACGTTACGGATTAAATATCAATGGAGGAGCAGAGTATCATTGTAGAAT GCTAGCCGAAAGACTCACCAATGATTATAACGTTGAAGTTCTAACTACTTGTGTAGATAATTATAGAACTGGAGAAAATC TTGAGTTTAAGGAAAAAGAGATTATCAATAAAGTCATTGTTCGCCGTTTTAAAACTAATCCCACTCATCCTGAACTTGAA AACTTTTATAAAAAGAAAGCTAAACCGGCTTATAAATTAAGACGTTTTTTATACAAATGTCACTTTCTAGCTATTGCTTC TTACTTTTTCCCTATTTGGCATTTCAAAGAAAAAGAAGAACTAGAAGCACTCGGTAGCCAAGTTTTCCATTCTCCGGCTC TCTTCAATTTCATAAAAGAAAATAAAGATAATTACAAAGCAATCATCCCTATTACAATAGATTATTCTCATGTATATTAC ACAACTTTATATGCACCAGAAAAGACTATTGTAATCCCTACAATGCATTATCACAAAACTGCATTTCGCTCAACCTTGAC ACAAGTCTTTACAAAGGCAGCCTACATCGCTTTCAACACAACAGCAGAACAAAAACTAGCAAGAAAAATATTTGGTATGC ACATGGCACCCCACAGTATTGTAAGCGTAGGGATAGAGCTAAGTGCTCCATCAGACTGGGCAGTGACCCAAGAAAAGTAT AATCTTCCTGATGAATATATGCTCTATGTAGGGAGAGTAGACCAAGGCAAGCTTAACAATGTGTATACTTATTTCCTCAA CTATAAAAAGGTATATCCTAATTCTGATTTAAAGTTTGTTCTTGTAGGCAAACAATATAGTGATCCTTTTAATCATCCGG ATATTATATATACTAATTTTGTTGAAGAACAAGAAAAGATATCAATCATTCAACATGCAAAGATTGTAATCAACCCATCA CTGTATGAAAGCCTATCACTTATATTACTGGAAGCAATGGCTTTAAAAAAAGCGATGCTGGTCAATGGCAATTGTAATGT ATTGAAAGAACATTGCCATAAAAGTAATAATGCTGCTTTATACTACACTAATGAAAAAAGTTTCATTGATAAGCTTCATA TGCTAGACTCTTCTACCAATCTTAGATTAGAGATGGGAGAAAAAGGATATTCTTACGTTAACAGTAATTACGACTGGAAC ATAATAATGAATAAACTAAAGCATGTTATCGAAAATATATAA
Upstream 100 bases:
>100_bases GATAGAGAATATAGTATTATCAGTAAAATAAAAACCAGATTTTAAGTTCCCAGGTTATCATTAATAATCGTATCTTTGCC GGAAAGCTTATTATATTAAT
Downstream 100 bases:
>100_bases AGATTTAGATACTCTTGATAGCTTGCTTTAAGCGCCCCATAATCAAAGTCCAATTATAGTTCGATTTCACATAAAATACA CCTTTCTCTCCCATCTCCTC
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Hexosyltransferase; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Protein; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSKENIAFVVVRYGLNINGGAEYHCRMLAERLTNDYNVEVLTTCVDNYRTGENLEFKEKEIINKVIVRRFKTNPTHPELE NFYKKKAKPAYKLRRFLYKCHFLAIASYFFPIWHFKEKEELEALGSQVFHSPALFNFIKENKDNYKAIIPITIDYSHVYY TTLYAPEKTIVIPTMHYHKTAFRSTLTQVFTKAAYIAFNTTAEQKLARKIFGMHMAPHSIVSVGIELSAPSDWAVTQEKY NLPDEYMLYVGRVDQGKLNNVYTYFLNYKKVYPNSDLKFVLVGKQYSDPFNHPDIIYTNFVEEQEKISIIQHAKIVINPS LYESLSLILLEAMALKKAMLVNGNCNVLKEHCHKSNNAALYYTNEKSFIDKLHMLDSSTNLRLEMGEKGYSYVNSNYDWN IIMNKLKHVIENI
Sequences:
>Translated_413_residues MSKENIAFVVVRYGLNINGGAEYHCRMLAERLTNDYNVEVLTTCVDNYRTGENLEFKEKEIINKVIVRRFKTNPTHPELE NFYKKKAKPAYKLRRFLYKCHFLAIASYFFPIWHFKEKEELEALGSQVFHSPALFNFIKENKDNYKAIIPITIDYSHVYY TTLYAPEKTIVIPTMHYHKTAFRSTLTQVFTKAAYIAFNTTAEQKLARKIFGMHMAPHSIVSVGIELSAPSDWAVTQEKY NLPDEYMLYVGRVDQGKLNNVYTYFLNYKKVYPNSDLKFVLVGKQYSDPFNHPDIIYTNFVEEQEKISIIQHAKIVINPS LYESLSLILLEAMALKKAMLVNGNCNVLKEHCHKSNNAALYYTNEKSFIDKLHMLDSSTNLRLEMGEKGYSYVNSNYDWN IIMNKLKHVIENI >Mature_412_residues SKENIAFVVVRYGLNINGGAEYHCRMLAERLTNDYNVEVLTTCVDNYRTGENLEFKEKEIINKVIVRRFKTNPTHPELEN FYKKKAKPAYKLRRFLYKCHFLAIASYFFPIWHFKEKEELEALGSQVFHSPALFNFIKENKDNYKAIIPITIDYSHVYYT TLYAPEKTIVIPTMHYHKTAFRSTLTQVFTKAAYIAFNTTAEQKLARKIFGMHMAPHSIVSVGIELSAPSDWAVTQEKYN LPDEYMLYVGRVDQGKLNNVYTYFLNYKKVYPNSDLKFVLVGKQYSDPFNHPDIIYTNFVEEQEKISIIQHAKIVINPSL YESLSLILLEAMALKKAMLVNGNCNVLKEHCHKSNNAALYYTNEKSFIDKLHMLDSSTNLRLEMGEKGYSYVNSNYDWNI IMNKLKHVIENI
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48180; Mature: 48049
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKENIAFVVVRYGLNINGGAEYHCRMLAERLTNDYNVEVLTTCVDNYRTGENLEFKEKE CCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCCHHHHH IINKVIVRRFKTNPTHPELENFYKKKAKPAYKLRRFLYKCHFLAIASYFFPIWHFKEKEE HHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LEALGSQVFHSPALFNFIKENKDNYKAIIPITIDYSHVYYTTLYAPEKTIVIPTMHYHKT HHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEECCCCEEEEECCHHHHH AFRSTLTQVFTKAAYIAFNTTAEQKLARKIFGMHMAPHSIVSVGIELSAPSDWAVTQEKY HHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCEECHHHC NLPDEYMLYVGRVDQGKLNNVYTYFLNYKKVYPNSDLKFVLVGKQYSDPFNHPDIIYTNF CCCHHHEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECH VEEQEKISIIQHAKIVINPSLYESLSLILLEAMALKKAMLVNGNCNVLKEHCHKSNNAAL HHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCEEE YYTNEKSFIDKLHMLDSSTNLRLEMGEKGYSYVNSNYDWNIIMNKLKHVIENI EEECCHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SKENIAFVVVRYGLNINGGAEYHCRMLAERLTNDYNVEVLTTCVDNYRTGENLEFKEKE CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCCHHHHH IINKVIVRRFKTNPTHPELENFYKKKAKPAYKLRRFLYKCHFLAIASYFFPIWHFKEKEE HHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LEALGSQVFHSPALFNFIKENKDNYKAIIPITIDYSHVYYTTLYAPEKTIVIPTMHYHKT HHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEECCCCEEEEECCHHHHH AFRSTLTQVFTKAAYIAFNTTAEQKLARKIFGMHMAPHSIVSVGIELSAPSDWAVTQEKY HHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCEECHHHC NLPDEYMLYVGRVDQGKLNNVYTYFLNYKKVYPNSDLKFVLVGKQYSDPFNHPDIIYTNF CCCHHHEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECH VEEQEKISIIQHAKIVINPSLYESLSLILLEAMALKKAMLVNGNCNVLKEHCHKSNNAAL HHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCEEE YYTNEKSFIDKLHMLDSSTNLRLEMGEKGYSYVNSNYDWNIIMNKLKHVIENI EEECCHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA