| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348781
Identifier: 29348781
GI number: 29348781
Start: 4348877
End: 4349857
Strand: Reverse
Name: 29348781
Synonym: BT_3372
Alternate gene names: NA
Gene position: 4349857-4348877 (Counterclockwise)
Preceding gene: 29348782
Following gene: 29348778
Centisome position: 69.48
GC content: 34.25
Gene sequence:
>981_bases ATGAAAGATATAGCAAATACTCCATTAGTAAGTATAATTTGTAGCACATATAATCATGGATTATATATATCCCAGTGTCT AGATGGTTTTCTAATGCAAAAGACCAATTTTCCATTTGAAATTCTAATCCATGATGATGCATCCACTGATAATACTCCTG ATATCATTCGCGAGTACGAGCATAATCACCCTCAAGTCATAAGACCCATATATCAGAAAGAAAACAAATACTCAAAGAAA GAAGATATCTTTGCCAAATACCAATGCTCACGAGTCAGAGGAAAGTATATTGCAATATGCGAAGGAGACGATTATTGGAT TGACCCATTAAAACTTCAGAAACAAATCGATTTTCTAGAAAACAATCCTGATTACGGCATGATATATACTACCAGCAAGG TATATAACCAAAAGAAAGGCAAAATAGAAGAAGATATTATTGGACGGAAATTTAATGGTTATATAGAGTTATTATCCGGA AATTGTATTCCAACCCTTACATCTTGCATACGCAGTGCCTTAGTAATGGAGTACTTGAAAGAAGTGGAACCCAAGAGCAA AAACTGGCTAATGGGAGACTATCCTATGTGGCTATGGATATCATATTATCACAAAATAAAGTTTCTTCCAGAAAGCACTA CGGTATACCGTGTCTTAGAAGAATCAGCAAGTCATTCTAATGATATACAGAAATATGAAAGATTCATATTATCGACCATT GATATAACTGCATTTTATATCCACAAATTTAATACTCCATTAACAGAGCCATACTTACGATCCTTAAGTTGCTTTTACTA TGATCTATACGATAAGTATATGTGTCTGGGCATGTATAAAAAGGCCAGACACTATTCAAAACTCATTAATCCTAGTTATG TATCCGCACGTATGCGGAGAAGAGTCCGCCGATTCCATCTCAGATTCATTCAGATAAGATTAGCAAAATGGTTCGATATA AAAGGAAAAGAAAGGAAGTAA
Upstream 100 bases:
>100_bases CAATGCACTTCATGCATATCATAAAATGGGATTTTATGAGGCTGAGGATAGGGATGAGAAGTATTTAATGAAGAAAGAGG TACACAAAAGTTAATATTGA
Downstream 100 bases:
>100_bases AAAGGGAAAAAAACTATCTAGTGAGATATTAAGTAAATATCCCTTTTTCTATTCACGAATCTCCACCTTTTTTAAACAGG AAATGAGTCAAGTAGTACAA
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKDIANTPLVSIICSTYNHGLYISQCLDGFLMQKTNFPFEILIHDDASTDNTPDIIREYEHNHPQVIRPIYQKENKYSKK EDIFAKYQCSRVRGKYIAICEGDDYWIDPLKLQKQIDFLENNPDYGMIYTTSKVYNQKKGKIEEDIIGRKFNGYIELLSG NCIPTLTSCIRSALVMEYLKEVEPKSKNWLMGDYPMWLWISYYHKIKFLPESTTVYRVLEESASHSNDIQKYERFILSTI DITAFYIHKFNTPLTEPYLRSLSCFYYDLYDKYMCLGMYKKARHYSKLINPSYVSARMRRRVRRFHLRFIQIRLAKWFDI KGKERK
Sequences:
>Translated_326_residues MKDIANTPLVSIICSTYNHGLYISQCLDGFLMQKTNFPFEILIHDDASTDNTPDIIREYEHNHPQVIRPIYQKENKYSKK EDIFAKYQCSRVRGKYIAICEGDDYWIDPLKLQKQIDFLENNPDYGMIYTTSKVYNQKKGKIEEDIIGRKFNGYIELLSG NCIPTLTSCIRSALVMEYLKEVEPKSKNWLMGDYPMWLWISYYHKIKFLPESTTVYRVLEESASHSNDIQKYERFILSTI DITAFYIHKFNTPLTEPYLRSLSCFYYDLYDKYMCLGMYKKARHYSKLINPSYVSARMRRRVRRFHLRFIQIRLAKWFDI KGKERK >Mature_326_residues MKDIANTPLVSIICSTYNHGLYISQCLDGFLMQKTNFPFEILIHDDASTDNTPDIIREYEHNHPQVIRPIYQKENKYSKK EDIFAKYQCSRVRGKYIAICEGDDYWIDPLKLQKQIDFLENNPDYGMIYTTSKVYNQKKGKIEEDIIGRKFNGYIELLSG NCIPTLTSCIRSALVMEYLKEVEPKSKNWLMGDYPMWLWISYYHKIKFLPESTTVYRVLEESASHSNDIQKYERFILSTI DITAFYIHKFNTPLTEPYLRSLSCFYYDLYDKYMCLGMYKKARHYSKLINPSYVSARMRRRVRRFHLRFIQIRLAKWFDI KGKERK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 38956; Mature: 38956
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIANTPLVSIICSTYNHGLYISQCLDGFLMQKTNFPFEILIHDDASTDNTPDIIREYE CCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHC HNHPQVIRPIYQKENKYSKKEDIFAKYQCSRVRGKYIAICEGDDYWIDPLKLQKQIDFLE CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHC NNPDYGMIYTTSKVYNQKKGKIEEDIIGRKFNGYIELLSGNCIPTLTSCIRSALVMEYLK CCCCCEEEEEEHHHHCCCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH EVEPKSKNWLMGDYPMWLWISYYHKIKFLPESTTVYRVLEESASHSNDIQKYERFILSTI HCCCCCCCCEECCCHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH DITAFYIHKFNTPLTEPYLRSLSCFYYDLYDKYMCLGMYKKARHYSKLINPSYVSARMRR HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RVRRFHLRFIQIRLAKWFDIKGKERK HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKDIANTPLVSIICSTYNHGLYISQCLDGFLMQKTNFPFEILIHDDASTDNTPDIIREYE CCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHC HNHPQVIRPIYQKENKYSKKEDIFAKYQCSRVRGKYIAICEGDDYWIDPLKLQKQIDFLE CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHC NNPDYGMIYTTSKVYNQKKGKIEEDIIGRKFNGYIELLSGNCIPTLTSCIRSALVMEYLK CCCCCEEEEEEHHHHCCCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH EVEPKSKNWLMGDYPMWLWISYYHKIKFLPESTTVYRVLEESASHSNDIQKYERFILSTI HCCCCCCCCEECCCHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH DITAFYIHKFNTPLTEPYLRSLSCFYYDLYDKYMCLGMYKKARHYSKLINPSYVSARMRR HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RVRRFHLRFIQIRLAKWFDIKGKERK HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]