Click here to switch to the map view.

The map label for this gene is paaI [C]

Identifier: 29348752

GI number: 29348752

Start: 4307323

End: 4307727

Strand: Reverse

Name: paaI [C]

Synonym: BT_3343

Alternate gene names: 29348752

Gene position: 4307727-4307323 (Counterclockwise)

Preceding gene: 29348753

Following gene: 29348749

Centisome position: 68.81

GC content: 49.38

Gene sequence:

>405_bases
ATGACCCCACAAGAGTTTTTTAAAAAGGACCTGTTCGCCGAAAATGCAGGCGTAGTATTGCTTGAAGTACGCGAAGGATA
CAGTAAAGCCAAACTGGAAATAAAACCCGAACATCTTAATGCCGGAGCGCGGACACAAGGAGGAGCGATTTTCACGCTGG
CAGATCTGGCACTCGCCGCAGCTGCCAATTCGCACGGAACACTCGCTTTCTCTCTTTCATCCTCAATCACTTTTCTGCGT
GCCAGCGGTCCGGGCGACACCCTCTATGCCGAGGCACGCGAACGGTATATCGGCCGAAGCACCGGCTGCTATCAAATAGA
TATTACTAACCAGAACGGAGACTTGATCGCTACATTCGAATCAAGTGTTTTCCGGAAAGATCAGAAAGTACCTTTTACTC
TGTAG

Upstream 100 bases:

>100_bases
TTACATTTGCGGAAGAATCTTGAATTTTAAATTATAGGCTAATTCGGCTCTCATAACTTATCATTCAACGTTTCAAATTA
GTAATTCAAAATTAATCATT

Downstream 100 bases:

>100_bases
ACAGACTATTTAACTATAGAAGTCAATGGATGACGATGACCTCTGACATCATTTAAGAAAGCTTTGGCTGAACCGAAATT
CAAGAACATATCTAAACGGA

Product: putative phenylacetic acid degradation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTPQEFFKKDLFAENAGVVLLEVREGYSKAKLEIKPEHLNAGARTQGGAIFTLADLALAAAANSHGTLAFSLSSSITFLR
ASGPGDTLYAEARERYIGRSTGCYQIDITNQNGDLIATFESSVFRKDQKVPFTL

Sequences:

>Translated_134_residues
MTPQEFFKKDLFAENAGVVLLEVREGYSKAKLEIKPEHLNAGARTQGGAIFTLADLALAAAANSHGTLAFSLSSSITFLR
ASGPGDTLYAEARERYIGRSTGCYQIDITNQNGDLIATFESSVFRKDQKVPFTL
>Mature_133_residues
TPQEFFKKDLFAENAGVVLLEVREGYSKAKLEIKPEHLNAGARTQGGAIFTLADLALAAAANSHGTLAFSLSSSITFLRA
SGPGDTLYAEARERYIGRSTGCYQIDITNQNGDLIATFESSVFRKDQKVPFTL

Specific function: Phenylacetic acid aerobic catabolism. [C]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787662, Length=120, Percent_Identity=35, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 14537; Mature: 14405

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPQEFFKKDLFAENAGVVLLEVREGYSKAKLEIKPEHLNAGARTQGGAIFTLADLALAA
CCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECHHHCCCCCCCCCCEEEEHHHHHHHH
AANSHGTLAFSLSSSITFLRASGPGDTLYAEARERYIGRSTGCYQIDITNQNGDLIATFE
CCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEC
SSVFRKDQKVPFTL
CHHHCCCCCCCCCC
>Mature Secondary Structure 
TPQEFFKKDLFAENAGVVLLEVREGYSKAKLEIKPEHLNAGARTQGGAIFTLADLALAA
CHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECHHHCCCCCCCCCCEEEEHHHHHHHH
AANSHGTLAFSLSSSITFLRASGPGDTLYAEARERYIGRSTGCYQIDITNQNGDLIATFE
CCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEC
SSVFRKDQKVPFTL
CHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]