| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348753
Identifier: 29348753
GI number: 29348753
Start: 4308033
End: 4309043
Strand: Reverse
Name: 29348753
Synonym: BT_3344
Alternate gene names: NA
Gene position: 4309043-4308033 (Counterclockwise)
Preceding gene: 29348754
Following gene: 29348752
Centisome position: 68.83
GC content: 43.92
Gene sequence:
>1011_bases ATGAGAAAATTATATATTTTAGGAATGATACTGGGGATGTATGCAACATTCAGTGCATGCAATGACGAGTGGAAAGATGA ACTTTACACACAGATGCTTTCTTTCAAGGCACCTTTAGGTGACAACGGCTTGAGTGAAATTTATGTACGCTATCAGCCGG ATGGAACAGGAATATACCAGTTGCCGGTCATTGTCAGCGGCTCGAAAAGCAACAGTCGGAATATCGATGCAAAAATAGCC GTGGATGAGGATACGCTCCGAATACTTAACCAGGAAAAATTCCCCGTAGGTCGTCAGGACCTCTGGTATGTCCCCCTTGC AGAACAGCATTATTCTTTTGAATCAAACATTTGCCATATTCCTGCGGGAGAGAATATACAGCTCTACCCCATCCATTTCA ACTTTAACGGGTTGGAACTGGATGAGAAATACGTACTTCCGCTGACTATTGAAGAAGACCCTTCTTATGTTCAAAACAAA TATAAGGGACGTTATAAAGCGCTGCTGGGAGTCAATCTGTTCAATGACTACTCCGGAACGTATAACACCACGCTGATGAA CATCTACATCGAAGGAACGACAACCGATCCCGCTAAGGTAGATACGCGCTTAGCCCGCGTAGTGGACGAGAATACCATTT TCTTCTATGCCGGTTCAACGTGGGTGGAAGATGAGAACCGCTCCAGGTATAAAGTATTCGTCGAGTTTGAAGAAGGAACG GAGGACGAGGAAGGTACTATTAAAGGAAAGTTGAGATTGTACGGTGACGAAGGCGAACCGGGAATCAATATCCGACCATT GGGAGAATGCAAATATGAAAAACGAATCATTCAGCACGAGACCATCAAATATATGGAACGCCACCTTACCACACTGGAAC TGAGTTATAAGTACACGGATGTCACTTCCAATCCGGATTATCCGATAACTTACGAAGTAAAAGGTTCTATGACAATGGAA CGCCAGATCAACCCGTTGATACCGGATGAGGATCAAGCTATTGAATGGTAA
Upstream 100 bases:
>100_bases CCTATCAGCTTCGATGAGCTGAAACGCAACAATAATCTCTCACAAGCTCCCGGATGGCAGAATTATGATTAGTGTTAACA TTATAAACCAAAAGATCAAT
Downstream 100 bases:
>100_bases GAGAAAATTAAAAAAGGAGGAGACAAGCACTTGATTAAACATAGAAGCTTATCTCCTCTTTCTTTTATCAGGATACTCCA TATAGCATTTTTATTAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MRKLYILGMILGMYATFSACNDEWKDELYTQMLSFKAPLGDNGLSEIYVRYQPDGTGIYQLPVIVSGSKSNSRNIDAKIA VDEDTLRILNQEKFPVGRQDLWYVPLAEQHYSFESNICHIPAGENIQLYPIHFNFNGLELDEKYVLPLTIEEDPSYVQNK YKGRYKALLGVNLFNDYSGTYNTTLMNIYIEGTTTDPAKVDTRLARVVDENTIFFYAGSTWVEDENRSRYKVFVEFEEGT EDEEGTIKGKLRLYGDEGEPGINIRPLGECKYEKRIIQHETIKYMERHLTTLELSYKYTDVTSNPDYPITYEVKGSMTME RQINPLIPDEDQAIEW
Sequences:
>Translated_336_residues MRKLYILGMILGMYATFSACNDEWKDELYTQMLSFKAPLGDNGLSEIYVRYQPDGTGIYQLPVIVSGSKSNSRNIDAKIA VDEDTLRILNQEKFPVGRQDLWYVPLAEQHYSFESNICHIPAGENIQLYPIHFNFNGLELDEKYVLPLTIEEDPSYVQNK YKGRYKALLGVNLFNDYSGTYNTTLMNIYIEGTTTDPAKVDTRLARVVDENTIFFYAGSTWVEDENRSRYKVFVEFEEGT EDEEGTIKGKLRLYGDEGEPGINIRPLGECKYEKRIIQHETIKYMERHLTTLELSYKYTDVTSNPDYPITYEVKGSMTME RQINPLIPDEDQAIEW >Mature_336_residues MRKLYILGMILGMYATFSACNDEWKDELYTQMLSFKAPLGDNGLSEIYVRYQPDGTGIYQLPVIVSGSKSNSRNIDAKIA VDEDTLRILNQEKFPVGRQDLWYVPLAEQHYSFESNICHIPAGENIQLYPIHFNFNGLELDEKYVLPLTIEEDPSYVQNK YKGRYKALLGVNLFNDYSGTYNTTLMNIYIEGTTTDPAKVDTRLARVVDENTIFFYAGSTWVEDENRSRYKVFVEFEEGT EDEEGTIKGKLRLYGDEGEPGINIRPLGECKYEKRIIQHETIKYMERHLTTLELSYKYTDVTSNPDYPITYEVKGSMTME RQINPLIPDEDQAIEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38886; Mature: 38886
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLYILGMILGMYATFSACNDEWKDELYTQMLSFKAPLGDNGLSEIYVRYQPDGTGIYQ CCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEE LPVIVSGSKSNSRNIDAKIAVDEDTLRILNQEKFPVGRQDLWYVPLAEQHYSFESNICHI EEEEEECCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEC PAGENIQLYPIHFNFNGLELDEKYVLPLTIEEDPSYVQNKYKGRYKALLGVNLFNDYSGT CCCCCEEEEEEEEECCCEEECCEEEEEEEECCCCHHHHHHCCCEEEEEEEEEEECCCCCC YNTTLMNIYIEGTTTDPAKVDTRLARVVDENTIFFYAGSTWVEDENRSRYKVFVEFEEGT EEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCCCEEEEEEEECCCC EDEEGTIKGKLRLYGDEGEPGINIRPLGECKYEKRIIQHETIKYMERHLTTLELSYKYTD CCCCCEEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEE VTSNPDYPITYEVKGSMTMERQINPLIPDEDQAIEW CCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MRKLYILGMILGMYATFSACNDEWKDELYTQMLSFKAPLGDNGLSEIYVRYQPDGTGIYQ CCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEE LPVIVSGSKSNSRNIDAKIAVDEDTLRILNQEKFPVGRQDLWYVPLAEQHYSFESNICHI EEEEEECCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEC PAGENIQLYPIHFNFNGLELDEKYVLPLTIEEDPSYVQNKYKGRYKALLGVNLFNDYSGT CCCCCEEEEEEEEECCCEEECCEEEEEEEECCCCHHHHHHCCCEEEEEEEEEEECCCCCC YNTTLMNIYIEGTTTDPAKVDTRLARVVDENTIFFYAGSTWVEDENRSRYKVFVEFEEGT EEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCCCEEEEEEEECCCC EDEEGTIKGKLRLYGDEGEPGINIRPLGECKYEKRIIQHETIKYMERHLTTLELSYKYTD CCCCCEEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEE VTSNPDYPITYEVKGSMTMERQINPLIPDEDQAIEW CCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA