Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348753

Identifier: 29348753

GI number: 29348753

Start: 4308033

End: 4309043

Strand: Reverse

Name: 29348753

Synonym: BT_3344

Alternate gene names: NA

Gene position: 4309043-4308033 (Counterclockwise)

Preceding gene: 29348754

Following gene: 29348752

Centisome position: 68.83

GC content: 43.92

Gene sequence:

>1011_bases
ATGAGAAAATTATATATTTTAGGAATGATACTGGGGATGTATGCAACATTCAGTGCATGCAATGACGAGTGGAAAGATGA
ACTTTACACACAGATGCTTTCTTTCAAGGCACCTTTAGGTGACAACGGCTTGAGTGAAATTTATGTACGCTATCAGCCGG
ATGGAACAGGAATATACCAGTTGCCGGTCATTGTCAGCGGCTCGAAAAGCAACAGTCGGAATATCGATGCAAAAATAGCC
GTGGATGAGGATACGCTCCGAATACTTAACCAGGAAAAATTCCCCGTAGGTCGTCAGGACCTCTGGTATGTCCCCCTTGC
AGAACAGCATTATTCTTTTGAATCAAACATTTGCCATATTCCTGCGGGAGAGAATATACAGCTCTACCCCATCCATTTCA
ACTTTAACGGGTTGGAACTGGATGAGAAATACGTACTTCCGCTGACTATTGAAGAAGACCCTTCTTATGTTCAAAACAAA
TATAAGGGACGTTATAAAGCGCTGCTGGGAGTCAATCTGTTCAATGACTACTCCGGAACGTATAACACCACGCTGATGAA
CATCTACATCGAAGGAACGACAACCGATCCCGCTAAGGTAGATACGCGCTTAGCCCGCGTAGTGGACGAGAATACCATTT
TCTTCTATGCCGGTTCAACGTGGGTGGAAGATGAGAACCGCTCCAGGTATAAAGTATTCGTCGAGTTTGAAGAAGGAACG
GAGGACGAGGAAGGTACTATTAAAGGAAAGTTGAGATTGTACGGTGACGAAGGCGAACCGGGAATCAATATCCGACCATT
GGGAGAATGCAAATATGAAAAACGAATCATTCAGCACGAGACCATCAAATATATGGAACGCCACCTTACCACACTGGAAC
TGAGTTATAAGTACACGGATGTCACTTCCAATCCGGATTATCCGATAACTTACGAAGTAAAAGGTTCTATGACAATGGAA
CGCCAGATCAACCCGTTGATACCGGATGAGGATCAAGCTATTGAATGGTAA

Upstream 100 bases:

>100_bases
CCTATCAGCTTCGATGAGCTGAAACGCAACAATAATCTCTCACAAGCTCCCGGATGGCAGAATTATGATTAGTGTTAACA
TTATAAACCAAAAGATCAAT

Downstream 100 bases:

>100_bases
GAGAAAATTAAAAAAGGAGGAGACAAGCACTTGATTAAACATAGAAGCTTATCTCCTCTTTCTTTTATCAGGATACTCCA
TATAGCATTTTTATTAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MRKLYILGMILGMYATFSACNDEWKDELYTQMLSFKAPLGDNGLSEIYVRYQPDGTGIYQLPVIVSGSKSNSRNIDAKIA
VDEDTLRILNQEKFPVGRQDLWYVPLAEQHYSFESNICHIPAGENIQLYPIHFNFNGLELDEKYVLPLTIEEDPSYVQNK
YKGRYKALLGVNLFNDYSGTYNTTLMNIYIEGTTTDPAKVDTRLARVVDENTIFFYAGSTWVEDENRSRYKVFVEFEEGT
EDEEGTIKGKLRLYGDEGEPGINIRPLGECKYEKRIIQHETIKYMERHLTTLELSYKYTDVTSNPDYPITYEVKGSMTME
RQINPLIPDEDQAIEW

Sequences:

>Translated_336_residues
MRKLYILGMILGMYATFSACNDEWKDELYTQMLSFKAPLGDNGLSEIYVRYQPDGTGIYQLPVIVSGSKSNSRNIDAKIA
VDEDTLRILNQEKFPVGRQDLWYVPLAEQHYSFESNICHIPAGENIQLYPIHFNFNGLELDEKYVLPLTIEEDPSYVQNK
YKGRYKALLGVNLFNDYSGTYNTTLMNIYIEGTTTDPAKVDTRLARVVDENTIFFYAGSTWVEDENRSRYKVFVEFEEGT
EDEEGTIKGKLRLYGDEGEPGINIRPLGECKYEKRIIQHETIKYMERHLTTLELSYKYTDVTSNPDYPITYEVKGSMTME
RQINPLIPDEDQAIEW
>Mature_336_residues
MRKLYILGMILGMYATFSACNDEWKDELYTQMLSFKAPLGDNGLSEIYVRYQPDGTGIYQLPVIVSGSKSNSRNIDAKIA
VDEDTLRILNQEKFPVGRQDLWYVPLAEQHYSFESNICHIPAGENIQLYPIHFNFNGLELDEKYVLPLTIEEDPSYVQNK
YKGRYKALLGVNLFNDYSGTYNTTLMNIYIEGTTTDPAKVDTRLARVVDENTIFFYAGSTWVEDENRSRYKVFVEFEEGT
EDEEGTIKGKLRLYGDEGEPGINIRPLGECKYEKRIIQHETIKYMERHLTTLELSYKYTDVTSNPDYPITYEVKGSMTME
RQINPLIPDEDQAIEW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38886; Mature: 38886

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLYILGMILGMYATFSACNDEWKDELYTQMLSFKAPLGDNGLSEIYVRYQPDGTGIYQ
CCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEE
LPVIVSGSKSNSRNIDAKIAVDEDTLRILNQEKFPVGRQDLWYVPLAEQHYSFESNICHI
EEEEEECCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEC
PAGENIQLYPIHFNFNGLELDEKYVLPLTIEEDPSYVQNKYKGRYKALLGVNLFNDYSGT
CCCCCEEEEEEEEECCCEEECCEEEEEEEECCCCHHHHHHCCCEEEEEEEEEEECCCCCC
YNTTLMNIYIEGTTTDPAKVDTRLARVVDENTIFFYAGSTWVEDENRSRYKVFVEFEEGT
EEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCCCEEEEEEEECCCC
EDEEGTIKGKLRLYGDEGEPGINIRPLGECKYEKRIIQHETIKYMERHLTTLELSYKYTD
CCCCCEEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEE
VTSNPDYPITYEVKGSMTMERQINPLIPDEDQAIEW
CCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKLYILGMILGMYATFSACNDEWKDELYTQMLSFKAPLGDNGLSEIYVRYQPDGTGIYQ
CCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEE
LPVIVSGSKSNSRNIDAKIAVDEDTLRILNQEKFPVGRQDLWYVPLAEQHYSFESNICHI
EEEEEECCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEC
PAGENIQLYPIHFNFNGLELDEKYVLPLTIEEDPSYVQNKYKGRYKALLGVNLFNDYSGT
CCCCCEEEEEEEEECCCEEECCEEEEEEEECCCCHHHHHHCCCEEEEEEEEEEECCCCCC
YNTTLMNIYIEGTTTDPAKVDTRLARVVDENTIFFYAGSTWVEDENRSRYKVFVEFEEGT
EEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCCCEEEEEEEECCCC
EDEEGTIKGKLRLYGDEGEPGINIRPLGECKYEKRIIQHETIKYMERHLTTLELSYKYTD
CCCCCEEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEE
VTSNPDYPITYEVKGSMTMERQINPLIPDEDQAIEW
CCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA