Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348731

Identifier: 29348731

GI number: 29348731

Start: 4265719

End: 4268331

Strand: Reverse

Name: 29348731

Synonym: BT_3322

Alternate gene names: NA

Gene position: 4268331-4265719 (Counterclockwise)

Preceding gene: 29348734

Following gene: 29348729

Centisome position: 68.18

GC content: 44.74

Gene sequence:

>2613_bases
ATGAGACCCCCCTACTGTTTTCTCCTGATAGGTCTTTTGCTTTTATGCAGTACACAGACTATCGCTTTCGCCCAATCCGG
CACTTATCAGACAATTCCCGAATCTTTGCGAGGCTACTGGCAATTTAAAGCAGACAATGTGTCTGACTGGAACGGTCCGC
TCATCGGAGAGAATTTCGTAGAGAACTATTATGTCGTTTTTTATGCCGAACAGATAAAACAGGAAGCTGACGGCAGCTAC
TTCTTCCATTTACGCAATCAGAAAGGAGATACGACGGAATTCCGTATCACACCTACCGGCAATGACGCCGCCACCATCTG
GTACAAAGGCTGGAAAGAGCCGAAGAACTGTATCCGCAAGCAAGTCCCCGACCACACGGAACCGCTCACTCCCCTTACAT
TGCCCGACCGTGTTTATCAGAAATGGGTGAAAGGATTATCCGGAAAAGTAATCTACGAATTCACCCGTGACGGAAAACTG
CTCTATGACGGAAAAACATGGGATATCTTATCGGCCGGATATTTTCTCAATAAAGAATATCGGCTGCTCGTCAAAAGCGG
AGAATCATACAAACTGCTTTACCTCAGCTTCCCCCTGCCGAAAACAATGAACGTAGCCGCTGAACTGCAAAATGAAAAAG
TCTCTCCCATCGCCTCACACCCTGAAATATATGCTTTCGCCGGATGTTGGATCAATCAAGCAACCGGGGACTGGCGCATC
GGATTCTTCGAAGACTTTGCTGTCTACCAATGTCAATTTTGGGATTATGAGTCGATAAACACCCAAAAGAATCAGACCAC
CATCATCCTGAAAAATGGAACAGAACAACTGAAAGTACGTTTAACTCGTAAAGATGAAACATCCTGCACCCTGTCTGTCG
GAAAAGAAAAGGCACAGACATATGTTCTTTGTAACGACAAATATCTACCCGATTATCCGGTAGCTGATACCACTCCTTTC
GTAGACAATGGTTATCAAACGGATAGCGTGACTCTCATCGGATACCTGCGTAACCTGCCTTCGACACGTCCTTTCGAAGT
AGACGTACCGGATATGATCACCAATAATGAAGAAGAATATACAACCGAAATCGACTCACTTGGAAGGTTCACCCTCCGTT
TCCCTGTATTGAACAGCCACAACGTGTTCATCGATTGGGGACGTACCACTATCTGTACATCCGTAGAGCCGGGAGAGACC
TATTTCCTCTATGTGGACTTCGCTGACAAAAAGAAATTAGTGATGGGAGAAAAGGCACGTATCCTCAACGAACTGCTGGC
CCACGAAGGACTCAGTGAATATATCGGCTACGACGAAGGAGAAAAAATGGAAAATATGGAATATTTGCAAAAGACGCAGG
ATATCATCCGTCATAAATCAGAATATCGTGCAAAGATGCTCAATGATCATCCGCTTCTCTCGCACAAGTTCCGCTATTAC
ACAGAACAGGAAATCCGCTACAACGCCGCACGTGACCTGATGCAGCGCCGCTTTTCGGTAGACCGTAACAAGCAGGAGCA
TCTGCAACCGAAATTTATGAGTTATGTAGACTCGGCACTATATCCCCGTCCGGTAGAGCCTTATACGCTTCTCAGAGATT
ATGGTTCTTTCCTGCGGGATTACGTCGGATACATAACGGACATTGCTCCCGCTTCTTCAAACAGATTGACCGTGACTCCT
CAAAAGATGGAAATGCTCTATCTCAAATTTGAAAGGGACGGAAAGATTCAGCTATCACAAGAAGAAAAAGACGCATTACA
CGCCTTCAGTAACTTCGAACAAGAAATTGAAAAAATGAAAGCTGCGAATACGGCTGACTCGCTGACAATGGCTGCCTACA
ACAAAAAGATGGAACCGAGCATCAAAACAATACAGAGCCTCGTAGGCAGAGACGAAATTTTCAATGACTATATGATGGGA
AACTTGCTCGCTAATTCCATCAATCGTACCCTTGCTATCATTGACTCCCTGCAAATGGACGAAAAATTAAAGGAGATACT
AAAGGCAAATTGCTATTATGAGATGTTGCAGCAGACTCACAAAGAATTGCCGGACAGCCTCATCAATAAATTCAAAGCAG
AAGTTTCTAATCCTTCCCTACAGGCTTATGTATTAAACCAACAAGGGATATACGAAGAAATATCCCATAAGGCCATCGAA
TATCCCGAAAGCCTGATGCCTAACGAACCTCTGGCAGAGATCACAGACGGAGAACAATTATTCCGCAAAATCATTGAGCC
TTATAAAGGGAAAGTGGTTTATCTGGATGTATGGGGCACCTGGTGCGGTCCGTGCAAGGACATGATGCAATATGCAGGAA
GCGCCAAGAAACTGTTTGAGGGAAAAGACGTGATATTCTTATATCTCTGCAACCATTCCTCAGACAAATCGTGGAAAAAC
ATTATCAAGGAATATGGACTGACCGGCAAAATTGCCGTCCACTATAACTTGCCCGATGAGCAGCAAAGGGCTATTGAGAA
GTTCCTGCAGGTTCGCTCCTTCCCCACCTATATGTTGATAGACAAGGAAGGAAACATCGTAAACCGTGACGCCCCCAGAC
CCAACAGGGAAAATGATCTTCTCAATGCAGTCTATAAGTTATTAGAGAAATAA

Upstream 100 bases:

>100_bases
AGTTAAACTACTACAAATAATAAACTTACCACACCTCATTATTCCGGTATTAAAATACCTTTGTCATAAATCGAAATACT
AACTTAAATAAAAACACACC

Downstream 100 bases:

>100_bases
ACGACTCATTTCTTCCGCAAATACTCGTATCCGAAACGGCAAAAGAGACATTTCCGTTTATCACAATACTCTTTGCGGAG
CTGTATCAATGCCTGGCTAT

Product: putative thioredoxin family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 870; Mature: 870

Protein sequence:

>870_residues
MRPPYCFLLIGLLLLCSTQTIAFAQSGTYQTIPESLRGYWQFKADNVSDWNGPLIGENFVENYYVVFYAEQIKQEADGSY
FFHLRNQKGDTTEFRITPTGNDAATIWYKGWKEPKNCIRKQVPDHTEPLTPLTLPDRVYQKWVKGLSGKVIYEFTRDGKL
LYDGKTWDILSAGYFLNKEYRLLVKSGESYKLLYLSFPLPKTMNVAAELQNEKVSPIASHPEIYAFAGCWINQATGDWRI
GFFEDFAVYQCQFWDYESINTQKNQTTIILKNGTEQLKVRLTRKDETSCTLSVGKEKAQTYVLCNDKYLPDYPVADTTPF
VDNGYQTDSVTLIGYLRNLPSTRPFEVDVPDMITNNEEEYTTEIDSLGRFTLRFPVLNSHNVFIDWGRTTICTSVEPGET
YFLYVDFADKKKLVMGEKARILNELLAHEGLSEYIGYDEGEKMENMEYLQKTQDIIRHKSEYRAKMLNDHPLLSHKFRYY
TEQEIRYNAARDLMQRRFSVDRNKQEHLQPKFMSYVDSALYPRPVEPYTLLRDYGSFLRDYVGYITDIAPASSNRLTVTP
QKMEMLYLKFERDGKIQLSQEEKDALHAFSNFEQEIEKMKAANTADSLTMAAYNKKMEPSIKTIQSLVGRDEIFNDYMMG
NLLANSINRTLAIIDSLQMDEKLKEILKANCYYEMLQQTHKELPDSLINKFKAEVSNPSLQAYVLNQQGIYEEISHKAIE
YPESLMPNEPLAEITDGEQLFRKIIEPYKGKVVYLDVWGTWCGPCKDMMQYAGSAKKLFEGKDVIFLYLCNHSSDKSWKN
IIKEYGLTGKIAVHYNLPDEQQRAIEKFLQVRSFPTYMLIDKEGNIVNRDAPRPNRENDLLNAVYKLLEK

Sequences:

>Translated_870_residues
MRPPYCFLLIGLLLLCSTQTIAFAQSGTYQTIPESLRGYWQFKADNVSDWNGPLIGENFVENYYVVFYAEQIKQEADGSY
FFHLRNQKGDTTEFRITPTGNDAATIWYKGWKEPKNCIRKQVPDHTEPLTPLTLPDRVYQKWVKGLSGKVIYEFTRDGKL
LYDGKTWDILSAGYFLNKEYRLLVKSGESYKLLYLSFPLPKTMNVAAELQNEKVSPIASHPEIYAFAGCWINQATGDWRI
GFFEDFAVYQCQFWDYESINTQKNQTTIILKNGTEQLKVRLTRKDETSCTLSVGKEKAQTYVLCNDKYLPDYPVADTTPF
VDNGYQTDSVTLIGYLRNLPSTRPFEVDVPDMITNNEEEYTTEIDSLGRFTLRFPVLNSHNVFIDWGRTTICTSVEPGET
YFLYVDFADKKKLVMGEKARILNELLAHEGLSEYIGYDEGEKMENMEYLQKTQDIIRHKSEYRAKMLNDHPLLSHKFRYY
TEQEIRYNAARDLMQRRFSVDRNKQEHLQPKFMSYVDSALYPRPVEPYTLLRDYGSFLRDYVGYITDIAPASSNRLTVTP
QKMEMLYLKFERDGKIQLSQEEKDALHAFSNFEQEIEKMKAANTADSLTMAAYNKKMEPSIKTIQSLVGRDEIFNDYMMG
NLLANSINRTLAIIDSLQMDEKLKEILKANCYYEMLQQTHKELPDSLINKFKAEVSNPSLQAYVLNQQGIYEEISHKAIE
YPESLMPNEPLAEITDGEQLFRKIIEPYKGKVVYLDVWGTWCGPCKDMMQYAGSAKKLFEGKDVIFLYLCNHSSDKSWKN
IIKEYGLTGKIAVHYNLPDEQQRAIEKFLQVRSFPTYMLIDKEGNIVNRDAPRPNRENDLLNAVYKLLEK
>Mature_870_residues
MRPPYCFLLIGLLLLCSTQTIAFAQSGTYQTIPESLRGYWQFKADNVSDWNGPLIGENFVENYYVVFYAEQIKQEADGSY
FFHLRNQKGDTTEFRITPTGNDAATIWYKGWKEPKNCIRKQVPDHTEPLTPLTLPDRVYQKWVKGLSGKVIYEFTRDGKL
LYDGKTWDILSAGYFLNKEYRLLVKSGESYKLLYLSFPLPKTMNVAAELQNEKVSPIASHPEIYAFAGCWINQATGDWRI
GFFEDFAVYQCQFWDYESINTQKNQTTIILKNGTEQLKVRLTRKDETSCTLSVGKEKAQTYVLCNDKYLPDYPVADTTPF
VDNGYQTDSVTLIGYLRNLPSTRPFEVDVPDMITNNEEEYTTEIDSLGRFTLRFPVLNSHNVFIDWGRTTICTSVEPGET
YFLYVDFADKKKLVMGEKARILNELLAHEGLSEYIGYDEGEKMENMEYLQKTQDIIRHKSEYRAKMLNDHPLLSHKFRYY
TEQEIRYNAARDLMQRRFSVDRNKQEHLQPKFMSYVDSALYPRPVEPYTLLRDYGSFLRDYVGYITDIAPASSNRLTVTP
QKMEMLYLKFERDGKIQLSQEEKDALHAFSNFEQEIEKMKAANTADSLTMAAYNKKMEPSIKTIQSLVGRDEIFNDYMMG
NLLANSINRTLAIIDSLQMDEKLKEILKANCYYEMLQQTHKELPDSLINKFKAEVSNPSLQAYVLNQQGIYEEISHKAIE
YPESLMPNEPLAEITDGEQLFRKIIEPYKGKVVYLDVWGTWCGPCKDMMQYAGSAKKLFEGKDVIFLYLCNHSSDKSWKN
IIKEYGLTGKIAVHYNLPDEQQRAIEKFLQVRSFPTYMLIDKEGNIVNRDAPRPNRENDLLNAVYKLLEK

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101028; Mature: 101028

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPPYCFLLIGLLLLCSTQTIAFAQSGTYQTIPESLRGYWQFKADNVSDWNGPLIGENFV
CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCHHH
ENYYVVFYAEQIKQEADGSYFFHLRNQKGDTTEFRITPTGNDAATIWYKGWKEPKNCIRK
CCEEEEEEEHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHH
QVPDHTEPLTPLTLPDRVYQKWVKGLSGKVIYEFTRDGKLLYDGKTWDILSAGYFLNKEY
HCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEECCEEECCCE
RLLVKSGESYKLLYLSFPLPKTMNVAAELQNEKVSPIASHPEIYAFAGCWINQATGDWRI
EEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCEEE
GFFEDFAVYQCQFWDYESINTQKNQTTIILKNGTEQLKVRLTRKDETSCTLSVGKEKAQT
EEEECCEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCE
YVLCNDKYLPDYPVADTTPFVDNGYQTDSVTLIGYLRNLPSTRPFEVDVPDMITNNEEEY
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCHHHCCCCHHH
TTEIDSLGRFTLRFPVLNSHNVFIDWGRTTICTSVEPGETYFLYVDFADKKKLVMGEKAR
HHHHHHCCCEEEEEEEECCCCEEEECCCEEEEECCCCCCEEEEEEEECCCCCHHCCHHHH
ILNELLAHEGLSEYIGYDEGEKMENMEYLQKTQDIIRHKSEYRAKMLNDHPLLSHKFRYY
HHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
TEQEIRYNAARDLMQRRFSVDRNKQEHLQPKFMSYVDSALYPRPVEPYTLLRDYGSFLRD
CHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
YVGYITDIAPASSNRLTVTPQKMEMLYLKFERDGKIQLSQEEKDALHAFSNFEQEIEKMK
HHHHHHHCCCCCCCEEEECHHHEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH
AANTADSLTMAAYNKKMEPSIKTIQSLVGRDEIFNDYMMGNLLANSINRTLAIIDSLQMD
HCCCHHHEEHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLKEILKANCYYEMLQQTHKELPDSLINKFKAEVSNPSLQAYVLNQQGIYEEISHKAIE
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHC
YPESLMPNEPLAEITDGEQLFRKIIEPYKGKVVYLDVWGTWCGPCKDMMQYAGSAKKLFE
CCHHHCCCCCCHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHC
GKDVIFLYLCNHSSDKSWKNIIKEYGLTGKIAVHYNLPDEQQRAIEKFLQVRSFPTYMLI
CCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
DKEGNIVNRDAPRPNRENDLLNAVYKLLEK
ECCCCEECCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRPPYCFLLIGLLLLCSTQTIAFAQSGTYQTIPESLRGYWQFKADNVSDWNGPLIGENFV
CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCHHH
ENYYVVFYAEQIKQEADGSYFFHLRNQKGDTTEFRITPTGNDAATIWYKGWKEPKNCIRK
CCEEEEEEEHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHH
QVPDHTEPLTPLTLPDRVYQKWVKGLSGKVIYEFTRDGKLLYDGKTWDILSAGYFLNKEY
HCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEECCEEECCCE
RLLVKSGESYKLLYLSFPLPKTMNVAAELQNEKVSPIASHPEIYAFAGCWINQATGDWRI
EEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCEEE
GFFEDFAVYQCQFWDYESINTQKNQTTIILKNGTEQLKVRLTRKDETSCTLSVGKEKAQT
EEEECCEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCE
YVLCNDKYLPDYPVADTTPFVDNGYQTDSVTLIGYLRNLPSTRPFEVDVPDMITNNEEEY
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCHHHCCCCHHH
TTEIDSLGRFTLRFPVLNSHNVFIDWGRTTICTSVEPGETYFLYVDFADKKKLVMGEKAR
HHHHHHCCCEEEEEEEECCCCEEEECCCEEEEECCCCCCEEEEEEEECCCCCHHCCHHHH
ILNELLAHEGLSEYIGYDEGEKMENMEYLQKTQDIIRHKSEYRAKMLNDHPLLSHKFRYY
HHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
TEQEIRYNAARDLMQRRFSVDRNKQEHLQPKFMSYVDSALYPRPVEPYTLLRDYGSFLRD
CHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
YVGYITDIAPASSNRLTVTPQKMEMLYLKFERDGKIQLSQEEKDALHAFSNFEQEIEKMK
HHHHHHHCCCCCCCEEEECHHHEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH
AANTADSLTMAAYNKKMEPSIKTIQSLVGRDEIFNDYMMGNLLANSINRTLAIIDSLQMD
HCCCHHHEEHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLKEILKANCYYEMLQQTHKELPDSLINKFKAEVSNPSLQAYVLNQQGIYEEISHKAIE
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHC
YPESLMPNEPLAEITDGEQLFRKIIEPYKGKVVYLDVWGTWCGPCKDMMQYAGSAKKLFE
CCHHHCCCCCCHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHC
GKDVIFLYLCNHSSDKSWKNIIKEYGLTGKIAVHYNLPDEQQRAIEKFLQVRSFPTYMLI
CCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
DKEGNIVNRDAPRPNRENDLLNAVYKLLEK
ECCCCEECCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA