| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29348539
Identifier: 29348539
GI number: 29348539
Start: 3989587
End: 3991794
Strand: Reverse
Name: 29348539
Synonym: BT_3130
Alternate gene names: NA
Gene position: 3991794-3989587 (Counterclockwise)
Preceding gene: 29348540
Following gene: 29348534
Centisome position: 63.76
GC content: 48.1
Gene sequence:
>2208_bases ATGAAGAAATTACTTTTAAGTGTATGTGCATTTTCATTGACTCTCGCTACGTTGCAGGCAGGGGAAATCACTAAATATGT AAATCCGTTTATTGGAACGGGGGCCATCGATGGGGGACTTTCGGGTAATAATTACCCGGGGGCGACCTCGCCGTTCGGTA TGATACAGCTTTCTCCGGACACCAGCGAAGCTCCCAATTGGGGGGACGCTTCCGGCTACGACTATAACCGGAATACGATC TTCGGTTTCAGCCATACCCGCCTGAGTGGGACAGGAGCCTCGGACCTGATCGACATTACATTGATGCCGACCAGTAGCGG ACGCACTTCTTCCGCATTCACGCATGACGAAGAGAAGGCCCGTCCCGGCTATTATCAGGTAATGCTGAAAGATGAGAATA TTAATGCAGAGCTTACCACTACTCAGAGAAACGGTATCCACCGCTATCAATATCCCGCCGGCAAAGATGCGGAGATTATA TTGGATATGGACCACTCGGCAGATAAGGGCAGTTGGGGACGCCGGATCATTAACTCTCAGATCCGCATTCTGAATGATCA TGCAGTGGAAGGTTACCGTATCATCACCGGATGGGCGAAACTGCGCAAGATTTATTTCTACATGGAGTTTTCCAGTCCTA TCCTTACTTCTACGCTGAGAGACGGCGGGCGTGTTCATGAAAACACAGCCGTGATCAACGGTACGAATCTTCATGGCTGT TTCCGTTTCGGCCAACTGAATGGCAAACCACTGACGTGTAAGGTAGCCCTTTCATCCGTCTCTATGGAGAATGCCCGTCA GAACATGGAACAGGAAGCACCGCACTGGGATTTCGACCGCTATGTGGCTGCTGCGGACGCTGATTGGGAAAAACAACTGG GAAAGATCGAAGTGAAAGGTACGGAAGTGCAGAAAGAGATATTCTATACGGCTCTTTACCACACCATGATACAGCCTAAC ACCATGTCCGACGTGAACGGCGAATACATGGCTGCCGACTATACGACCCGCAAAGTAGCGAACAATGAAACTCATTACAC CACATTCTCCCTGTGGGATACTTTCCGCGCTTCTCATCCTCTCTACACATTGCTGGAACCCGAACGGGTGACTGACTTCG TGAAGAGCATGATACGCCAGTATGAATATTACGGCTACCTGCCTATCTGGCAATTATGGGGACAGGACAATTACTGTATG ATCGGTAACCACTCCATCCCTGTGATCACTGATGCCATCCTGAAAGGTATTCCCGGAATTGATATGGAGAAGGCCTATGA AGCAGTCTATAACAGTTCGGTAACCTCACACCCCAACTCTCCTTTTGAGGTATGGGAGAAATACGGCTTTATGCCCGAAA ACATTCAGACTCAATCTGTCTCCATCACTCTGGAGCAGGCTTTTGATGACTGGTGTGTTGCCCAACTGGCTGCAAAATTG AACAAGGATGCCGATTATCAGCGATTCCACAAACGCTCCGAATATTACCGGAACCTTTTCCATCCGAAAACGAAGTTCTT CCAGTCCAAGAATGACAAGGGAGAATGGATCGAACCTTTCGACCCGTATCAATACGGTGGAAACGGCGGGCATCCGTTTA CCGAAGGAAATGCATGGCAATACTTTTGGTATGTTCCGCATAACATCCAGGCCTTGATGGAACTGACAGGAGGAACGAAA GCCTTTGAACAAAAGCTGGATACCTTTTTTACCTCTACCTATAAGAGTGAGCAGATGAATCATAACGCTTCGGGATTTGT GGGACAGTATGCACATGGTAATGAACCCAGCCATCACGTAGCTTATCTCTATAATTTTGCAGGTCAGCCGTGGAAGACGC AAAAGTATGTCAGTCATATTCTGAACACGCTGTATAACAACACTTCTTCGGGATATGCCGGAAATGATGACTGCGGTCAG ATGTCTGCCTGGTATGTATTCAGTGCGATGGGATTCTATCCGGTCAATCCTGCCGACGGCCGGTATATCATCGGTTCCCC GCTTTTGGATGAGTGTACTTTGAAACTGGCAGGTAATAAGGAGTTCCGTATCCGGACCATCCGCAAGTCTCCCGAAGATA TCTACATTCAGTCGGTGACTTTGAACGGGAAGAAACACAAAGATTTCTTCATCACTCATCAGGACATCATGAACGGTGGT ACGATGGTATTCAAGATGGGTAAGAAACCATCCGGATGGGGAAAGTAA
Upstream 100 bases:
>100_bases CTTTTCACAACACAGCAGCTCAACAGCCGTCTCATTGAAATAACAGAAGAATAAAAAGCCATAGACATAAGAAACATATC TTATAAAAACACCATGAACC
Downstream 100 bases:
>100_bases ACAGTATGAATTCAGATATTGTATCTAATAGAAACATGGATGAGTTATATCATATAGGGCAATAAATATTATAGCCTTGT TTCTATATAATAAGAGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Sugar Hydrolase; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MKKLLLSVCAFSLTLATLQAGEITKYVNPFIGTGAIDGGLSGNNYPGATSPFGMIQLSPDTSEAPNWGDASGYDYNRNTI FGFSHTRLSGTGASDLIDITLMPTSSGRTSSAFTHDEEKARPGYYQVMLKDENINAELTTTQRNGIHRYQYPAGKDAEII LDMDHSADKGSWGRRIINSQIRILNDHAVEGYRIITGWAKLRKIYFYMEFSSPILTSTLRDGGRVHENTAVINGTNLHGC FRFGQLNGKPLTCKVALSSVSMENARQNMEQEAPHWDFDRYVAAADADWEKQLGKIEVKGTEVQKEIFYTALYHTMIQPN TMSDVNGEYMAADYTTRKVANNETHYTTFSLWDTFRASHPLYTLLEPERVTDFVKSMIRQYEYYGYLPIWQLWGQDNYCM IGNHSIPVITDAILKGIPGIDMEKAYEAVYNSSVTSHPNSPFEVWEKYGFMPENIQTQSVSITLEQAFDDWCVAQLAAKL NKDADYQRFHKRSEYYRNLFHPKTKFFQSKNDKGEWIEPFDPYQYGGNGGHPFTEGNAWQYFWYVPHNIQALMELTGGTK AFEQKLDTFFTSTYKSEQMNHNASGFVGQYAHGNEPSHHVAYLYNFAGQPWKTQKYVSHILNTLYNNTSSGYAGNDDCGQ MSAWYVFSAMGFYPVNPADGRYIIGSPLLDECTLKLAGNKEFRIRTIRKSPEDIYIQSVTLNGKKHKDFFITHQDIMNGG TMVFKMGKKPSGWGK
Sequences:
>Translated_735_residues MKKLLLSVCAFSLTLATLQAGEITKYVNPFIGTGAIDGGLSGNNYPGATSPFGMIQLSPDTSEAPNWGDASGYDYNRNTI FGFSHTRLSGTGASDLIDITLMPTSSGRTSSAFTHDEEKARPGYYQVMLKDENINAELTTTQRNGIHRYQYPAGKDAEII LDMDHSADKGSWGRRIINSQIRILNDHAVEGYRIITGWAKLRKIYFYMEFSSPILTSTLRDGGRVHENTAVINGTNLHGC FRFGQLNGKPLTCKVALSSVSMENARQNMEQEAPHWDFDRYVAAADADWEKQLGKIEVKGTEVQKEIFYTALYHTMIQPN TMSDVNGEYMAADYTTRKVANNETHYTTFSLWDTFRASHPLYTLLEPERVTDFVKSMIRQYEYYGYLPIWQLWGQDNYCM IGNHSIPVITDAILKGIPGIDMEKAYEAVYNSSVTSHPNSPFEVWEKYGFMPENIQTQSVSITLEQAFDDWCVAQLAAKL NKDADYQRFHKRSEYYRNLFHPKTKFFQSKNDKGEWIEPFDPYQYGGNGGHPFTEGNAWQYFWYVPHNIQALMELTGGTK AFEQKLDTFFTSTYKSEQMNHNASGFVGQYAHGNEPSHHVAYLYNFAGQPWKTQKYVSHILNTLYNNTSSGYAGNDDCGQ MSAWYVFSAMGFYPVNPADGRYIIGSPLLDECTLKLAGNKEFRIRTIRKSPEDIYIQSVTLNGKKHKDFFITHQDIMNGG TMVFKMGKKPSGWGK >Mature_735_residues MKKLLLSVCAFSLTLATLQAGEITKYVNPFIGTGAIDGGLSGNNYPGATSPFGMIQLSPDTSEAPNWGDASGYDYNRNTI FGFSHTRLSGTGASDLIDITLMPTSSGRTSSAFTHDEEKARPGYYQVMLKDENINAELTTTQRNGIHRYQYPAGKDAEII LDMDHSADKGSWGRRIINSQIRILNDHAVEGYRIITGWAKLRKIYFYMEFSSPILTSTLRDGGRVHENTAVINGTNLHGC FRFGQLNGKPLTCKVALSSVSMENARQNMEQEAPHWDFDRYVAAADADWEKQLGKIEVKGTEVQKEIFYTALYHTMIQPN TMSDVNGEYMAADYTTRKVANNETHYTTFSLWDTFRASHPLYTLLEPERVTDFVKSMIRQYEYYGYLPIWQLWGQDNYCM IGNHSIPVITDAILKGIPGIDMEKAYEAVYNSSVTSHPNSPFEVWEKYGFMPENIQTQSVSITLEQAFDDWCVAQLAAKL NKDADYQRFHKRSEYYRNLFHPKTKFFQSKNDKGEWIEPFDPYQYGGNGGHPFTEGNAWQYFWYVPHNIQALMELTGGTK AFEQKLDTFFTSTYKSEQMNHNASGFVGQYAHGNEPSHHVAYLYNFAGQPWKTQKYVSHILNTLYNNTSSGYAGNDDCGQ MSAWYVFSAMGFYPVNPADGRYIIGSPLLDECTLKLAGNKEFRIRTIRKSPEDIYIQSVTLNGKKHKDFFITHQDIMNGG TMVFKMGKKPSGWGK
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83376; Mature: 83376
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLSVCAFSLTLATLQAGEITKYVNPFIGTGAIDGGLSGNNYPGATSPFGMIQLSPD CHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC TSEAPNWGDASGYDYNRNTIFGFSHTRLSGTGASDLIDITLMPTSSGRTSSAFTHDEEKA CCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCEEEEEEEECCCCCCCCCCCCCHHHC RPGYYQVMLKDENINAELTTTQRNGIHRYQYPAGKDAEIILDMDHSADKGSWGRRIINSQ CCCEEEEEEECCCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCCCHHHHHHCCC IRILNDHAVEGYRIITGWAKLRKIYFYMEFSSPILTSTLRDGGRVHENTAVINGTNLHGC EEEEECCCCCCEEEEECHHEEEEEEEEEEECCCHHHHHHHCCCCEECCEEEEECCCCCEE FRFGQLNGKPLTCKVALSSVSMENARQNMEQEAPHWDFDRYVAAADADWEKQLGKIEVKG EEECCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCHHHCCCEEEEEC TEVQKEIFYTALYHTMIQPNTMSDVNGEYMAADYTTRKVANNETHYTTFSLWDTFRASHP CHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHCCCCCEEEEEEHHHHHHCCCC LYTLLEPERVTDFVKSMIRQYEYYGYLPIWQLWGQDNYCMIGNHSIPVITDAILKGIPGI EEEEECHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCC DMEKAYEAVYNSSVTSHPNSPFEVWEKYGFMPENIQTQSVSITLEQAFDDWCVAQLAAKL CHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHH NKDADYQRFHKRSEYYRNLFHPKTKFFQSKNDKGEWIEPFDPYQYGGNGGHPFTEGNAWQ CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE YFWYVPHNIQALMELTGGTKAFEQKLDTFFTSTYKSEQMNHNASGFVGQYAHGNEPSHHV EEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEE AYLYNFAGQPWKTQKYVSHILNTLYNNTSSGYAGNDDCGQMSAWYVFSAMGFYPVNPADG EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCC RYIIGSPLLDECTLKLAGNKEFRIRTIRKSPEDIYIQSVTLNGKKHKDFFITHQDIMNGG CEEECCCCCCHHEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEEHHHHHCCC TMVFKMGKKPSGWGK EEEEEECCCCCCCCC >Mature Secondary Structure MKKLLLSVCAFSLTLATLQAGEITKYVNPFIGTGAIDGGLSGNNYPGATSPFGMIQLSPD CHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC TSEAPNWGDASGYDYNRNTIFGFSHTRLSGTGASDLIDITLMPTSSGRTSSAFTHDEEKA CCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCEEEEEEEECCCCCCCCCCCCCHHHC RPGYYQVMLKDENINAELTTTQRNGIHRYQYPAGKDAEIILDMDHSADKGSWGRRIINSQ CCCEEEEEEECCCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCCCHHHHHHCCC IRILNDHAVEGYRIITGWAKLRKIYFYMEFSSPILTSTLRDGGRVHENTAVINGTNLHGC EEEEECCCCCCEEEEECHHEEEEEEEEEEECCCHHHHHHHCCCCEECCEEEEECCCCCEE FRFGQLNGKPLTCKVALSSVSMENARQNMEQEAPHWDFDRYVAAADADWEKQLGKIEVKG EEECCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCHHHCCCEEEEEC TEVQKEIFYTALYHTMIQPNTMSDVNGEYMAADYTTRKVANNETHYTTFSLWDTFRASHP CHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHCCCCCEEEEEEHHHHHHCCCC LYTLLEPERVTDFVKSMIRQYEYYGYLPIWQLWGQDNYCMIGNHSIPVITDAILKGIPGI EEEEECHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCC DMEKAYEAVYNSSVTSHPNSPFEVWEKYGFMPENIQTQSVSITLEQAFDDWCVAQLAAKL CHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHH NKDADYQRFHKRSEYYRNLFHPKTKFFQSKNDKGEWIEPFDPYQYGGNGGHPFTEGNAWQ CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE YFWYVPHNIQALMELTGGTKAFEQKLDTFFTSTYKSEQMNHNASGFVGQYAHGNEPSHHV EEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEE AYLYNFAGQPWKTQKYVSHILNTLYNNTSSGYAGNDDCGQMSAWYVFSAMGFYPVNPADG EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCC RYIIGSPLLDECTLKLAGNKEFRIRTIRKSPEDIYIQSVTLNGKKHKDFFITHQDIMNGG CEEECCCCCCHHEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEEHHHHHCCC TMVFKMGKKPSGWGK EEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA