| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is atsA [H]
Identifier: 29348515
GI number: 29348515
Start: 3950514
End: 3952166
Strand: Reverse
Name: atsA [H]
Synonym: BT_3106
Alternate gene names: 29348515
Gene position: 3952166-3950514 (Counterclockwise)
Preceding gene: 29348516
Following gene: 29348514
Centisome position: 63.13
GC content: 40.59
Gene sequence:
>1653_bases ATGAAAAGAATAGATTATACTTTTATGTTGACCCTTGGTGCGTCAATAGGTGCTTGTCCTGTATTGGCCCAGCAGAATGT ATCAAAACCTAATATTGTCCTTATATTATTGGATGATGTCGGATATTCCGATTTCGGATGTTATGGTTCGGAAATAAATA CTCCTAATATAGATCGGCTTGCTGAAAATGGTATTAGACTACGTCATTTTTATAACCAGGCTCGGAGTGCGCCAACCAGG GCTTCGTTGATTACTGGTTTATATCCTCATCAAGTTGGGAATGGTGCTTTAGGGAAAGTTCCGGGTTATCCGGCATATCA GGGATATCCAAATGAGAATAATGTTTTCTTGCCTGAAGCATTGAAAACAGCTGGATATTTTAATGTCATGACAGGTAAAT GGCATTTAGGATATTTTCAAGGTGTTACTCCAATAAGCAGAGGATTTGACCGTTCACTGAACGCTCCGTTTGGCGGCTAT TATTTTTCTTCTGACAAATCATTGAAGAAGAATAAAAAAGAAAGAACCAACCAACGAAATCTTTATTTGAATGATGAAGA AATTGGATTCGATGATGATCGTTTACCTGAAAATTGGTATTCTACTCATTTGTGGACAGATTTTGGATTAAAGTTTATTG ATGAAGCTATTGAAGAAAAACAGCCCTTCTTTTGGTATCTGGCACATAATGCTGCACATTTTCCCTTGCAGGCTCCTGTA GAAACCATCAATAAATATAAGGGAAAATATATGAAGGGATGGGAAGATGTGCGTAATGCACGATTCAAAAAGCAATTAGA ATTAGGGTTATTCGAGCGTCCTGACCAGTTAACACCTCGTAATCCCAAGGTTCCGGAATGGGATTCACTGACTCAGGAAG AAAAGGAGCGCTATGACATGCAGATGGCTATTTATGCAGCTGTTATTGAGGAAGTAGATCGGAGTATCGGGCGTGTGGTA GAACATTTAAAAGAAAAAGGTGTGCTGGATAATACCCTGATTATCCTCCTTTCGGACAATGGTGGAAATGGAGAACCGGG CATAGAAGGACGCTTTGCTGGAAAGAATCCCGGTTCAGCGGGGAGTACAGTTTTTCTGGGTGCTGCCTGGGCAGACGTTG CTAATGCACCATTCTTCTTGTACAAACATCACGGTCATGAAGGAGGTTGCAACACACCGTTTATTGTTTCCTATCCGAAT GGAATTGATAAAAGTCTGAACGGCACTATTCAAAAAGACAATTACGGACATATAGTAGATATCATGCCTACTTTGGTGAA ACTTACAGGCGCTACTTATCCCTCTTCGCGTGGCGGCCATAAAGTACCTCCAATGGAAGGTATATCCTTACTGCCTTTAT TAAAGGGAGAACCGGTAAAGCAAACCAAACCGACCATTGTGGAACACGAAGGCAACAAAATGCTGCGTGACGGAGAATGG AAAATAGTGCAGGAATATAAAGAGCCGAAATGGAGGCTATACAACTTGAAGAATGATCCTACTGAAATGCGGAATCTCGC AGATAGGGAGCCTGAAATACTGAACCGAATGATTCATGATTACCAAAAAATGGCAGATCATATCGGAGTAGAAAGTGAGA TCGAATTCAAGGTTGGCAAATGGTATACTCCTGTAGAAGAATATCTCAAATAA
Upstream 100 bases:
>100_bases TCCGGATATCCTTAAACAGTTATCGGACAAATGGGCCGTATGGGCAGCTGAGACAAAAGTTTTAATTCCATTTCCTAATA ATAAAAAATAATATATAGCC
Downstream 100 bases:
>100_bases GAAGTATCGGAATTATAATCTTTAATTTATAACATATGAAAAATAAGTATCGTAAACTAGCCGTCATCATGCTGACTGCT GTATGTTTCGCGGGGTGTCA
Product: arylsulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MKRIDYTFMLTLGASIGACPVLAQQNVSKPNIVLILLDDVGYSDFGCYGSEINTPNIDRLAENGIRLRHFYNQARSAPTR ASLITGLYPHQVGNGALGKVPGYPAYQGYPNENNVFLPEALKTAGYFNVMTGKWHLGYFQGVTPISRGFDRSLNAPFGGY YFSSDKSLKKNKKERTNQRNLYLNDEEIGFDDDRLPENWYSTHLWTDFGLKFIDEAIEEKQPFFWYLAHNAAHFPLQAPV ETINKYKGKYMKGWEDVRNARFKKQLELGLFERPDQLTPRNPKVPEWDSLTQEEKERYDMQMAIYAAVIEEVDRSIGRVV EHLKEKGVLDNTLIILLSDNGGNGEPGIEGRFAGKNPGSAGSTVFLGAAWADVANAPFFLYKHHGHEGGCNTPFIVSYPN GIDKSLNGTIQKDNYGHIVDIMPTLVKLTGATYPSSRGGHKVPPMEGISLLPLLKGEPVKQTKPTIVEHEGNKMLRDGEW KIVQEYKEPKWRLYNLKNDPTEMRNLADREPEILNRMIHDYQKMADHIGVESEIEFKVGKWYTPVEEYLK
Sequences:
>Translated_550_residues MKRIDYTFMLTLGASIGACPVLAQQNVSKPNIVLILLDDVGYSDFGCYGSEINTPNIDRLAENGIRLRHFYNQARSAPTR ASLITGLYPHQVGNGALGKVPGYPAYQGYPNENNVFLPEALKTAGYFNVMTGKWHLGYFQGVTPISRGFDRSLNAPFGGY YFSSDKSLKKNKKERTNQRNLYLNDEEIGFDDDRLPENWYSTHLWTDFGLKFIDEAIEEKQPFFWYLAHNAAHFPLQAPV ETINKYKGKYMKGWEDVRNARFKKQLELGLFERPDQLTPRNPKVPEWDSLTQEEKERYDMQMAIYAAVIEEVDRSIGRVV EHLKEKGVLDNTLIILLSDNGGNGEPGIEGRFAGKNPGSAGSTVFLGAAWADVANAPFFLYKHHGHEGGCNTPFIVSYPN GIDKSLNGTIQKDNYGHIVDIMPTLVKLTGATYPSSRGGHKVPPMEGISLLPLLKGEPVKQTKPTIVEHEGNKMLRDGEW KIVQEYKEPKWRLYNLKNDPTEMRNLADREPEILNRMIHDYQKMADHIGVESEIEFKVGKWYTPVEEYLK >Mature_550_residues MKRIDYTFMLTLGASIGACPVLAQQNVSKPNIVLILLDDVGYSDFGCYGSEINTPNIDRLAENGIRLRHFYNQARSAPTR ASLITGLYPHQVGNGALGKVPGYPAYQGYPNENNVFLPEALKTAGYFNVMTGKWHLGYFQGVTPISRGFDRSLNAPFGGY YFSSDKSLKKNKKERTNQRNLYLNDEEIGFDDDRLPENWYSTHLWTDFGLKFIDEAIEEKQPFFWYLAHNAAHFPLQAPV ETINKYKGKYMKGWEDVRNARFKKQLELGLFERPDQLTPRNPKVPEWDSLTQEEKERYDMQMAIYAAVIEEVDRSIGRVV EHLKEKGVLDNTLIILLSDNGGNGEPGIEGRFAGKNPGSAGSTVFLGAAWADVANAPFFLYKHHGHEGGCNTPFIVSYPN GIDKSLNGTIQKDNYGHIVDIMPTLVKLTGATYPSSRGGHKVPPMEGISLLPLLKGEPVKQTKPTIVEHEGNKMLRDGEW KIVQEYKEPKWRLYNLKNDPTEMRNLADREPEILNRMIHDYQKMADHIGVESEIEFKVGKWYTPVEEYLK
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI109389362, Length=408, Percent_Identity=28.6764705882353, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI38569407, Length=402, Percent_Identity=28.3582089552239, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI38569405, Length=402, Percent_Identity=28.3582089552239, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI4503899, Length=444, Percent_Identity=27.7027027027027, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI59797060, Length=539, Percent_Identity=24.6753246753247, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI53831991, Length=479, Percent_Identity=26.3048016701461, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI31742482, Length=499, Percent_Identity=24.6492985971944, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI146229331, Length=447, Percent_Identity=25.0559284116331, Blast_Score=103, Evalue=6e-22, Organism=Homo sapiens, GI146229329, Length=447, Percent_Identity=25.0559284116331, Blast_Score=103, Evalue=6e-22, Organism=Homo sapiens, GI6005990, Length=447, Percent_Identity=25.0559284116331, Blast_Score=103, Evalue=6e-22, Organism=Homo sapiens, GI146229324, Length=447, Percent_Identity=25.0559284116331, Blast_Score=103, Evalue=6e-22, Organism=Homo sapiens, GI58743319, Length=342, Percent_Identity=25.1461988304094, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI45430057, Length=428, Percent_Identity=25.2336448598131, Blast_Score=94, Evalue=5e-19, Organism=Homo sapiens, GI157266309, Length=146, Percent_Identity=38.3561643835616, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI71852586, Length=131, Percent_Identity=41.9847328244275, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI71852584, Length=146, Percent_Identity=40.4109589041096, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI5360208, Length=331, Percent_Identity=25.3776435045317, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI4557659, Length=356, Percent_Identity=24.7191011235955, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI87081924, Length=492, Percent_Identity=23.1707317073171, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790233, Length=443, Percent_Identity=24.8306997742664, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790112, Length=510, Percent_Identity=25.0980392156863, Blast_Score=92, Evalue=1e-19, Organism=Caenorhabditis elegans, GI115533416, Length=521, Percent_Identity=26.8714011516315, Blast_Score=141, Evalue=7e-34, Organism=Caenorhabditis elegans, GI115533418, Length=502, Percent_Identity=26.4940239043825, Blast_Score=128, Evalue=7e-30, Organism=Caenorhabditis elegans, GI17559078, Length=215, Percent_Identity=28.3720930232558, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI281363223, Length=465, Percent_Identity=27.5268817204301, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24666175, Length=451, Percent_Identity=29.0465631929047, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI24666109, Length=474, Percent_Identity=27.6371308016878, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI281366397, Length=346, Percent_Identity=30.0578034682081, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI281366395, Length=346, Percent_Identity=30.0578034682081, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI24666163, Length=346, Percent_Identity=30.0578034682081, Blast_Score=121, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 62410; Mature: 62410
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIDYTFMLTLGASIGACPVLAQQNVSKPNIVLILLDDVGYSDFGCYGSEINTPNIDRL CCCCCEEEEEEECCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH AENGIRLRHFYNQARSAPTRASLITGLYPHQVGNGALGKVPGYPAYQGYPNENNVFLPEA HHCCCHHHHHHHHHHCCCCHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEECHHH LKTAGYFNVMTGKWHLGYFQGVTPISRGFDRSLNAPFGGYYFSSDKSLKKNKKERTNQRN HHHCCCEEEEECCEECHHHCCCCHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCC LYLNDEEIGFDDDRLPENWYSTHLWTDFGLKFIDEAIEEKQPFFWYLAHNAAHFPLQAPV EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHH ETINKYKGKYMKGWEDVRNARFKKQLELGLFERPDQLTPRNPKVPEWDSLTQEEKERYDM HHHHHHCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QMAIYAAVIEEVDRSIGRVVEHLKEKGVLDNTLIILLSDNGGNGEPGIEGRFAGKNPGSA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCC GSTVFLGAAWADVANAPFFLYKHHGHEGGCNTPFIVSYPNGIDKSLNGTIQKDNYGHIVD CCEEEEEEHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEECCCCCCHHH IMPTLVKLTGATYPSSRGGHKVPPMEGISLLPLLKGEPVKQTKPTIVEHEGNKMLRDGEW HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCEECCCH KIVQEYKEPKWRLYNLKNDPTEMRNLADREPEILNRMIHDYQKMADHIGVESEIEFKVGK HHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC WYTPVEEYLK EECCHHHHCC >Mature Secondary Structure MKRIDYTFMLTLGASIGACPVLAQQNVSKPNIVLILLDDVGYSDFGCYGSEINTPNIDRL CCCCCEEEEEEECCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH AENGIRLRHFYNQARSAPTRASLITGLYPHQVGNGALGKVPGYPAYQGYPNENNVFLPEA HHCCCHHHHHHHHHHCCCCHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEECHHH LKTAGYFNVMTGKWHLGYFQGVTPISRGFDRSLNAPFGGYYFSSDKSLKKNKKERTNQRN HHHCCCEEEEECCEECHHHCCCCHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCC LYLNDEEIGFDDDRLPENWYSTHLWTDFGLKFIDEAIEEKQPFFWYLAHNAAHFPLQAPV EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHH ETINKYKGKYMKGWEDVRNARFKKQLELGLFERPDQLTPRNPKVPEWDSLTQEEKERYDM HHHHHHCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QMAIYAAVIEEVDRSIGRVVEHLKEKGVLDNTLIILLSDNGGNGEPGIEGRFAGKNPGSA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCC GSTVFLGAAWADVANAPFFLYKHHGHEGGCNTPFIVSYPNGIDKSLNGTIQKDNYGHIVD CCEEEEEEHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEECCCCCCHHH IMPTLVKLTGATYPSSRGGHKVPPMEGISLLPLLKGEPVKQTKPTIVEHEGNKMLRDGEW HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCEECCCH KIVQEYKEPKWRLYNLKNDPTEMRNLADREPEILNRMIHDYQKMADHIGVESEIEFKVGK HHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC WYTPVEEYLK EECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7744061; 10984043 [H]