| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is atsA [H]
Identifier: 29348502
GI number: 29348502
Start: 3928001
End: 3929623
Strand: Reverse
Name: atsA [H]
Synonym: BT_3093
Alternate gene names: 29348502
Gene position: 3929623-3928001 (Counterclockwise)
Preceding gene: 29348503
Following gene: 29348501
Centisome position: 62.77
GC content: 43.25
Gene sequence:
>1623_bases ATGACTTTTGCACAAGAAAAGCCTAATATCATTGTTATATTGGCGGACGATCTGGGTTTCTCCGATTTAGGTTGCTACGG AGGAGAAGTACAGACACCGGTATTGGATAAGATGGCCAAACAGGGTGTCCGTATGACACAAATGTATAACAGTGCGCGGA GTTGTCCGTCACGTGCCAATTTATTAACCGGACTTTATCCGCATCAGACAGGGTTAGGACACATGGATGCAACCCGTCCG GCATGGCCGAAAGGATATGCCGGCTTTCGTTCCAATTCTGACAACGTTACCATTGCCGAAGTATTAAAAGATGCCGGATA TTTCACAGCCATGTCCGGTAAATGGCATCTGGGCAAAACCGCCAATCCGATAAACCGAGGTTTCCTGGAATATTATGGTT TGTTAGGTGGATTCAATTCTTTTTGGAATCCGGACGTATATACCCGATTGCCTAAGGATCGTAACCCACGTCAATATAAA GAGGGAGAATTTTATGCTACTAACGTAATAACCGATTATGCCATAGACTTTATTAATCAGGCACATCAGGAAGAAAAACC TTTGTTTCTGTATTTGGCATACAATGCTGCTCATTTTCCGTTGCACGCTCCGAAAGAAGTAACGGATAAATATATGAAGA TTTACCTGCAGGGTTGGGATAAGATTCGAGATCAACGTTGGAAACGAATAGTAAAGATGGGGCTTTTGCAAGGAAAACCA GCATTAAGCCCGCGTGGTGTTGTTCCCGAAAGTTTGTTTGAGGATGAGACACATCCGCTGCCTGCCTGGGATTCTTTAAC AAAGGAACAGCAGACTGACCTGGCTCGCCGTATGGCTATTTATGCTGCCATGATAGATATTATGGATACCAATATTGGTC GGGTATTGGATACTTTACAGAAGAACGGTGAACTGGATAATACATTTATCATGTTCATGTCGGACAACGGAGCTTGTGCC GAATGGCATGAATTTGGTTTCGACAAGCAAACTGGAACAGAATATCATACTCATGTTGGTGCTGAATTAGACCAGATGGG ACTACCGGGAACTTATCATCATTACGGAACCGGCTGGGCAAACGTTTGTTGTACCCCATTTACACTTTATAAACATTATG CGCATGAAGGTGGAATATCCACTCCTTGCATTATCCAGTGGGGTAAACAGATTAAGCACAAAGGCAGTATTGACCATCAA CCGGCACAATTCTCGGATATCATGGCAACTTGCATCGAACTGGCAGGGACTAAATATCCCGAAGAATACGAAGGAAGAAA GATTGTACCTACACCGGGCAAGTCAATCCTTCCTATTGTACGCGGTGAAGAAATGCCGGACCGTTATATCTATGCGGAAC ATGAAGGTAATCGTATGGTACGCAAAGGTGACTGGAAACTGGTCTCTGCGAATTTTAGAGGTGATGAATGGGAACTCTAT AATATCAAAGAAGACCGCACAGAACAACATAATCTGATAAAGGAATACCCTGAAATGGCAAAGGAACTGGAAGACGCTTA TTTTGAGTGGGCAGACCATAGTGATGTGCTTTATTTCCCGAAGGTTTGGAATACTTATAATAAAGGACGCCGGAAGGACT TTAAAGAATATAGAGATAAGTAG
Upstream 100 bases:
>100_bases TTCCGATGCTTTATGAAAACGGAAAATTTAAACCTAATCACAATTATCAGGCAAAATGAAAACATCACTATTGATAACCG GGGGATTGGCTTTCGGAGCA
Downstream 100 bases:
>100_bases GAAAACACAGTAGGAAAGAAAAGATAGGAACTTATGAACAAGAAACTACTAATTGCAGTATTTGTAAGTGCTATGGCACA TACGTTCGCTTGCGCAGCAA
Product: arylsulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MTFAQEKPNIIVILADDLGFSDLGCYGGEVQTPVLDKMAKQGVRMTQMYNSARSCPSRANLLTGLYPHQTGLGHMDATRP AWPKGYAGFRSNSDNVTIAEVLKDAGYFTAMSGKWHLGKTANPINRGFLEYYGLLGGFNSFWNPDVYTRLPKDRNPRQYK EGEFYATNVITDYAIDFINQAHQEEKPLFLYLAYNAAHFPLHAPKEVTDKYMKIYLQGWDKIRDQRWKRIVKMGLLQGKP ALSPRGVVPESLFEDETHPLPAWDSLTKEQQTDLARRMAIYAAMIDIMDTNIGRVLDTLQKNGELDNTFIMFMSDNGACA EWHEFGFDKQTGTEYHTHVGAELDQMGLPGTYHHYGTGWANVCCTPFTLYKHYAHEGGISTPCIIQWGKQIKHKGSIDHQ PAQFSDIMATCIELAGTKYPEEYEGRKIVPTPGKSILPIVRGEEMPDRYIYAEHEGNRMVRKGDWKLVSANFRGDEWELY NIKEDRTEQHNLIKEYPEMAKELEDAYFEWADHSDVLYFPKVWNTYNKGRRKDFKEYRDK
Sequences:
>Translated_540_residues MTFAQEKPNIIVILADDLGFSDLGCYGGEVQTPVLDKMAKQGVRMTQMYNSARSCPSRANLLTGLYPHQTGLGHMDATRP AWPKGYAGFRSNSDNVTIAEVLKDAGYFTAMSGKWHLGKTANPINRGFLEYYGLLGGFNSFWNPDVYTRLPKDRNPRQYK EGEFYATNVITDYAIDFINQAHQEEKPLFLYLAYNAAHFPLHAPKEVTDKYMKIYLQGWDKIRDQRWKRIVKMGLLQGKP ALSPRGVVPESLFEDETHPLPAWDSLTKEQQTDLARRMAIYAAMIDIMDTNIGRVLDTLQKNGELDNTFIMFMSDNGACA EWHEFGFDKQTGTEYHTHVGAELDQMGLPGTYHHYGTGWANVCCTPFTLYKHYAHEGGISTPCIIQWGKQIKHKGSIDHQ PAQFSDIMATCIELAGTKYPEEYEGRKIVPTPGKSILPIVRGEEMPDRYIYAEHEGNRMVRKGDWKLVSANFRGDEWELY NIKEDRTEQHNLIKEYPEMAKELEDAYFEWADHSDVLYFPKVWNTYNKGRRKDFKEYRDK >Mature_539_residues TFAQEKPNIIVILADDLGFSDLGCYGGEVQTPVLDKMAKQGVRMTQMYNSARSCPSRANLLTGLYPHQTGLGHMDATRPA WPKGYAGFRSNSDNVTIAEVLKDAGYFTAMSGKWHLGKTANPINRGFLEYYGLLGGFNSFWNPDVYTRLPKDRNPRQYKE GEFYATNVITDYAIDFINQAHQEEKPLFLYLAYNAAHFPLHAPKEVTDKYMKIYLQGWDKIRDQRWKRIVKMGLLQGKPA LSPRGVVPESLFEDETHPLPAWDSLTKEQQTDLARRMAIYAAMIDIMDTNIGRVLDTLQKNGELDNTFIMFMSDNGACAE WHEFGFDKQTGTEYHTHVGAELDQMGLPGTYHHYGTGWANVCCTPFTLYKHYAHEGGISTPCIIQWGKQIKHKGSIDHQP AQFSDIMATCIELAGTKYPEEYEGRKIVPTPGKSILPIVRGEEMPDRYIYAEHEGNRMVRKGDWKLVSANFRGDEWELYN IKEDRTEQHNLIKEYPEMAKELEDAYFEWADHSDVLYFPKVWNTYNKGRRKDFKEYRDK
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI38569405, Length=581, Percent_Identity=25.6454388984509, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI38569407, Length=329, Percent_Identity=30.6990881458967, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI109389362, Length=224, Percent_Identity=37.5, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI53831991, Length=484, Percent_Identity=25.8264462809917, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI59797060, Length=220, Percent_Identity=37.2727272727273, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI157266309, Length=513, Percent_Identity=25.7309941520468, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI31742482, Length=454, Percent_Identity=27.3127753303965, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI71852584, Length=483, Percent_Identity=25.0517598343685, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI58743319, Length=329, Percent_Identity=27.0516717325228, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI4503899, Length=219, Percent_Identity=34.703196347032, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI71852586, Length=139, Percent_Identity=41.0071942446043, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI146229331, Length=225, Percent_Identity=32.8888888888889, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI146229329, Length=225, Percent_Identity=32.8888888888889, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI6005990, Length=225, Percent_Identity=32.8888888888889, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI146229324, Length=225, Percent_Identity=32.8888888888889, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI45430057, Length=333, Percent_Identity=28.5285285285285, Blast_Score=96, Evalue=1e-19, Organism=Escherichia coli, GI1790112, Length=533, Percent_Identity=23.0769230769231, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1790233, Length=233, Percent_Identity=31.7596566523605, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87081924, Length=266, Percent_Identity=27.0676691729323, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115533416, Length=529, Percent_Identity=22.6843100189036, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17559078, Length=217, Percent_Identity=33.1797235023041, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI115533418, Length=519, Percent_Identity=22.7360308285164, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24666175, Length=459, Percent_Identity=26.5795206971678, Blast_Score=117, Evalue=3e-26, Organism=Drosophila melanogaster, GI281366397, Length=234, Percent_Identity=32.9059829059829, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI281366395, Length=234, Percent_Identity=32.9059829059829, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI24666163, Length=234, Percent_Identity=32.9059829059829, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI24666109, Length=230, Percent_Identity=34.7826086956522, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI281363223, Length=208, Percent_Identity=35.5769230769231, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI24653364, Length=349, Percent_Identity=24.6418338108883, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI21356831, Length=563, Percent_Identity=22.0248667850799, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 62070; Mature: 61939
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS00149 SULFATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFAQEKPNIIVILADDLGFSDLGCYGGEVQTPVLDKMAKQGVRMTQMYNSARSCPSRAN CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHH LLTGLYPHQTGLGHMDATRPAWPKGYAGFRSNSDNVTIAEVLKDAGYFTAMSGKWHLGKT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCEEEECCCEECCCC ANPINRGFLEYYGLLGGFNSFWNPDVYTRLPKDRNPRQYKEGEFYATNVITDYAIDFINQ CCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH AHQEEKPLFLYLAYNAAHFPLHAPKEVTDKYMKIYLQGWDKIRDQRWKRIVKMGLLQGKP HHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ALSPRGVVPESLFEDETHPLPAWDSLTKEQQTDLARRMAIYAAMIDIMDTNIGRVLDTLQ CCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KNGELDNTFIMFMSDNGACAEWHEFGFDKQTGTEYHTHVGAELDQMGLPGTYHHYGTGWA HCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHCCCCHHHCCCCCCCCCCCCCHH NVCCTPFTLYKHYAHEGGISTPCIIQWGKQIKHKGSIDHQPAQFSDIMATCIELAGTKYP HHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC EEYEGRKIVPTPGKSILPIVRGEEMPDRYIYAEHEGNRMVRKGDWKLVSANFRGDEWELY HHHCCCEECCCCCCCCCCEECCCCCCCCEEEEECCCCCCEEECCEEEEEECCCCCCEEEE NIKEDRTEQHNLIKEYPEMAKELEDAYFEWADHSDVLYFPKVWNTYNKGRRKDFKEYRDK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHCHHHHHHHHHHCCC >Mature Secondary Structure TFAQEKPNIIVILADDLGFSDLGCYGGEVQTPVLDKMAKQGVRMTQMYNSARSCPSRAN CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHH LLTGLYPHQTGLGHMDATRPAWPKGYAGFRSNSDNVTIAEVLKDAGYFTAMSGKWHLGKT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCEEEECCCEECCCC ANPINRGFLEYYGLLGGFNSFWNPDVYTRLPKDRNPRQYKEGEFYATNVITDYAIDFINQ CCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH AHQEEKPLFLYLAYNAAHFPLHAPKEVTDKYMKIYLQGWDKIRDQRWKRIVKMGLLQGKP HHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ALSPRGVVPESLFEDETHPLPAWDSLTKEQQTDLARRMAIYAAMIDIMDTNIGRVLDTLQ CCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KNGELDNTFIMFMSDNGACAEWHEFGFDKQTGTEYHTHVGAELDQMGLPGTYHHYGTGWA HCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHCCCCHHHCCCCCCCCCCCCCHH NVCCTPFTLYKHYAHEGGISTPCIIQWGKQIKHKGSIDHQPAQFSDIMATCIELAGTKYP HHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC EEYEGRKIVPTPGKSILPIVRGEEMPDRYIYAEHEGNRMVRKGDWKLVSANFRGDEWELY HHHCCCEECCCCCCCCCCEECCCCCCCCEEEEECCCCCCEEECCEEEEEECCCCCCEEEE NIKEDRTEQHNLIKEYPEMAKELEDAYFEWADHSDVLYFPKVWNTYNKGRRKDFKEYRDK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7744061; 10984043 [H]