Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348503

Identifier: 29348503

GI number: 29348503

Start: 3929665

End: 3930795

Strand: Reverse

Name: 29348503

Synonym: BT_3094

Alternate gene names: NA

Gene position: 3930795-3929665 (Counterclockwise)

Preceding gene: 29348504

Following gene: 29348502

Centisome position: 62.79

GC content: 44.47

Gene sequence:

>1131_bases
ATGAAATTTATATTGCGATTAGGACTTGCTTTACTGACAGGATTTGTCTCAGTCAGCACAGCATCGGCACAAGCATATGG
AACTGCTGATACAAACGCTCCGGAGCTGCGTGTCCCAAAATCTGTTCAACCGGCATTTGACTACTGGATGCGTGACACAT
GGGCAACACTAGGCCCCGACGGTTACTACTATATCACTGGAACCACTTCTACCCCCGACCGTCACTTTCCGGGACAGAGA
CATTGCTGGGATTGGAATGACGGTTTGTATCTTTGGCGCTCCAAAGACCTGAAGATATGGGAAGCCATGGGACGAATCTG
GTCAATGGAAAAAGACGGTACCTGGCAGAAAGATCCCAAAGTATATAAAGAGGGAGAGAAATATGCGAAGAAGTCTATCA
ATAATGATCCGATGGATAACCGTTTCCACGCTGTATGGGCACCGGAAATGCACTATATAAAGAGTGCGAAAAATTGGTTT
ATTGTAGCCTGCATGAATCAATCGGCAGGCGGAAGAGGCTCTTTTATTCTGCGGAGTACTACCGGGAAGCCGGAGGGACC
TTATGAAAATATCGAAGGTAACGAGGATAAAGCCATTTTTCCAAACATTGACGGAAGCCTGTTTGAAGATACGGATGGTA
CCGTATATTTTGTCGGTCACAACCACTATATAGCACGCATGAAACCAGATATGAGTGGTTTGGCAGAAGAGATAAAGACA
TTAAAAGAAAGTAAATACTCTCCGGAGCCGTATGTTGAAGGAGCATTCATCTTTAAATATGATGGAAAATATCATTTGGT
ACAAGCTATCTGGGCACACCGCACGGTGAAGGGGGACACTTATGTCGAGAAGGAAGGGTTAACTAATAAGAAAACTCGTT
ATAGCTATGATTGTATCATTGCCACTGCCGACAATGTATATGGTCCTTATGGTAAACGGTATAACGCAATTACCGGCGGC
GGACACAACAATCTGTTTCAGGATAAGGATGGCAACTGGTGGGCAACCATGTTTTTTAACCCTCGTGGCGCACAGGCGGC
CGAATATAAAGTGACATGTCGGCCGGGATTGATTCCGATGCTTTATGAAAACGGAAAATTTAAACCTAATCACAATTATC
AGGCAAAATGA

Upstream 100 bases:

>100_bases
CAAAAGAATGTACATATTGACGGATATTAAAGACATTGTTCCATGAGCTCAATCCTGTAACAGTCTACTTTTGTATCCGT
AAATAATAAAACTGTAATCT

Downstream 100 bases:

>100_bases
AAACATCACTATTGATAACCGGGGGATTGGCTTTCGGAGCAATGACTTTTGCACAAGAAAAGCCTAATATCATTGTTATA
TTGGCGGACGATCTGGGTTT

Product: putative secreted xylosidase

Products: NA

Alternate protein names: Arylsulfatase; Secreted Xylosidase; Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKFILRLGLALLTGFVSVSTASAQAYGTADTNAPELRVPKSVQPAFDYWMRDTWATLGPDGYYYITGTTSTPDRHFPGQR
HCWDWNDGLYLWRSKDLKIWEAMGRIWSMEKDGTWQKDPKVYKEGEKYAKKSINNDPMDNRFHAVWAPEMHYIKSAKNWF
IVACMNQSAGGRGSFILRSTTGKPEGPYENIEGNEDKAIFPNIDGSLFEDTDGTVYFVGHNHYIARMKPDMSGLAEEIKT
LKESKYSPEPYVEGAFIFKYDGKYHLVQAIWAHRTVKGDTYVEKEGLTNKKTRYSYDCIIATADNVYGPYGKRYNAITGG
GHNNLFQDKDGNWWATMFFNPRGAQAAEYKVTCRPGLIPMLYENGKFKPNHNYQAK

Sequences:

>Translated_376_residues
MKFILRLGLALLTGFVSVSTASAQAYGTADTNAPELRVPKSVQPAFDYWMRDTWATLGPDGYYYITGTTSTPDRHFPGQR
HCWDWNDGLYLWRSKDLKIWEAMGRIWSMEKDGTWQKDPKVYKEGEKYAKKSINNDPMDNRFHAVWAPEMHYIKSAKNWF
IVACMNQSAGGRGSFILRSTTGKPEGPYENIEGNEDKAIFPNIDGSLFEDTDGTVYFVGHNHYIARMKPDMSGLAEEIKT
LKESKYSPEPYVEGAFIFKYDGKYHLVQAIWAHRTVKGDTYVEKEGLTNKKTRYSYDCIIATADNVYGPYGKRYNAITGG
GHNNLFQDKDGNWWATMFFNPRGAQAAEYKVTCRPGLIPMLYENGKFKPNHNYQAK
>Mature_376_residues
MKFILRLGLALLTGFVSVSTASAQAYGTADTNAPELRVPKSVQPAFDYWMRDTWATLGPDGYYYITGTTSTPDRHFPGQR
HCWDWNDGLYLWRSKDLKIWEAMGRIWSMEKDGTWQKDPKVYKEGEKYAKKSINNDPMDNRFHAVWAPEMHYIKSAKNWF
IVACMNQSAGGRGSFILRSTTGKPEGPYENIEGNEDKAIFPNIDGSLFEDTDGTVYFVGHNHYIARMKPDMSGLAEEIKT
LKESKYSPEPYVEGAFIFKYDGKYHLVQAIWAHRTVKGDTYVEKEGLTNKKTRYSYDCIIATADNVYGPYGKRYNAITGG
GHNNLFQDKDGNWWATMFFNPRGAQAAEYKVTCRPGLIPMLYENGKFKPNHNYQAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42989; Mature: 42989

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFILRLGLALLTGFVSVSTASAQAYGTADTNAPELRVPKSVQPAFDYWMRDTWATLGPD
CHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCC
GYYYITGTTSTPDRHFPGQRHCWDWNDGLYLWRSKDLKIWEAMGRIWSMEKDGTWQKDPK
CEEEEEECCCCCCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCH
VYKEGEKYAKKSINNDPMDNRFHAVWAPEMHYIKSAKNWFIVACMNQSAGGRGSFILRST
HHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHCCCCEEEEEEECCCCCCCCEEEEEEC
TGKPEGPYENIEGNEDKAIFPNIDGSLFEDTDGTVYFVGHNHYIARMKPDMSGLAEEIKT
CCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCEEEEEECCEEEEEECCCHHHHHHHHHH
LKESKYSPEPYVEGAFIFKYDGKYHLVQAIWAHRTVKGDTYVEKEGLTNKKTRYSYDCII
HHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCEECCCCEEECCCCCCCCCEEEEEEEE
ATADNVYGPYGKRYNAITGGGHNNLFQDKDGNWWATMFFNPRGAQAAEYKVTCRPGLIPM
EECCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEE
LYENGKFKPNHNYQAK
EECCCCCCCCCCCCCC
>Mature Secondary Structure
MKFILRLGLALLTGFVSVSTASAQAYGTADTNAPELRVPKSVQPAFDYWMRDTWATLGPD
CHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCC
GYYYITGTTSTPDRHFPGQRHCWDWNDGLYLWRSKDLKIWEAMGRIWSMEKDGTWQKDPK
CEEEEEECCCCCCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCH
VYKEGEKYAKKSINNDPMDNRFHAVWAPEMHYIKSAKNWFIVACMNQSAGGRGSFILRST
HHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHCCCCEEEEEEECCCCCCCCEEEEEEC
TGKPEGPYENIEGNEDKAIFPNIDGSLFEDTDGTVYFVGHNHYIARMKPDMSGLAEEIKT
CCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCEEEEEECCEEEEEECCCHHHHHHHHHH
LKESKYSPEPYVEGAFIFKYDGKYHLVQAIWAHRTVKGDTYVEKEGLTNKKTRYSYDCII
HHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCEECCCCEEECCCCCCCCCEEEEEEEE
ATADNVYGPYGKRYNAITGGGHNNLFQDKDGNWWATMFFNPRGAQAAEYKVTCRPGLIPM
EECCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEE
LYENGKFKPNHNYQAK
EECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA