| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348503
Identifier: 29348503
GI number: 29348503
Start: 3929665
End: 3930795
Strand: Reverse
Name: 29348503
Synonym: BT_3094
Alternate gene names: NA
Gene position: 3930795-3929665 (Counterclockwise)
Preceding gene: 29348504
Following gene: 29348502
Centisome position: 62.79
GC content: 44.47
Gene sequence:
>1131_bases ATGAAATTTATATTGCGATTAGGACTTGCTTTACTGACAGGATTTGTCTCAGTCAGCACAGCATCGGCACAAGCATATGG AACTGCTGATACAAACGCTCCGGAGCTGCGTGTCCCAAAATCTGTTCAACCGGCATTTGACTACTGGATGCGTGACACAT GGGCAACACTAGGCCCCGACGGTTACTACTATATCACTGGAACCACTTCTACCCCCGACCGTCACTTTCCGGGACAGAGA CATTGCTGGGATTGGAATGACGGTTTGTATCTTTGGCGCTCCAAAGACCTGAAGATATGGGAAGCCATGGGACGAATCTG GTCAATGGAAAAAGACGGTACCTGGCAGAAAGATCCCAAAGTATATAAAGAGGGAGAGAAATATGCGAAGAAGTCTATCA ATAATGATCCGATGGATAACCGTTTCCACGCTGTATGGGCACCGGAAATGCACTATATAAAGAGTGCGAAAAATTGGTTT ATTGTAGCCTGCATGAATCAATCGGCAGGCGGAAGAGGCTCTTTTATTCTGCGGAGTACTACCGGGAAGCCGGAGGGACC TTATGAAAATATCGAAGGTAACGAGGATAAAGCCATTTTTCCAAACATTGACGGAAGCCTGTTTGAAGATACGGATGGTA CCGTATATTTTGTCGGTCACAACCACTATATAGCACGCATGAAACCAGATATGAGTGGTTTGGCAGAAGAGATAAAGACA TTAAAAGAAAGTAAATACTCTCCGGAGCCGTATGTTGAAGGAGCATTCATCTTTAAATATGATGGAAAATATCATTTGGT ACAAGCTATCTGGGCACACCGCACGGTGAAGGGGGACACTTATGTCGAGAAGGAAGGGTTAACTAATAAGAAAACTCGTT ATAGCTATGATTGTATCATTGCCACTGCCGACAATGTATATGGTCCTTATGGTAAACGGTATAACGCAATTACCGGCGGC GGACACAACAATCTGTTTCAGGATAAGGATGGCAACTGGTGGGCAACCATGTTTTTTAACCCTCGTGGCGCACAGGCGGC CGAATATAAAGTGACATGTCGGCCGGGATTGATTCCGATGCTTTATGAAAACGGAAAATTTAAACCTAATCACAATTATC AGGCAAAATGA
Upstream 100 bases:
>100_bases CAAAAGAATGTACATATTGACGGATATTAAAGACATTGTTCCATGAGCTCAATCCTGTAACAGTCTACTTTTGTATCCGT AAATAATAAAACTGTAATCT
Downstream 100 bases:
>100_bases AAACATCACTATTGATAACCGGGGGATTGGCTTTCGGAGCAATGACTTTTGCACAAGAAAAGCCTAATATCATTGTTATA TTGGCGGACGATCTGGGTTT
Product: putative secreted xylosidase
Products: NA
Alternate protein names: Arylsulfatase; Secreted Xylosidase; Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKFILRLGLALLTGFVSVSTASAQAYGTADTNAPELRVPKSVQPAFDYWMRDTWATLGPDGYYYITGTTSTPDRHFPGQR HCWDWNDGLYLWRSKDLKIWEAMGRIWSMEKDGTWQKDPKVYKEGEKYAKKSINNDPMDNRFHAVWAPEMHYIKSAKNWF IVACMNQSAGGRGSFILRSTTGKPEGPYENIEGNEDKAIFPNIDGSLFEDTDGTVYFVGHNHYIARMKPDMSGLAEEIKT LKESKYSPEPYVEGAFIFKYDGKYHLVQAIWAHRTVKGDTYVEKEGLTNKKTRYSYDCIIATADNVYGPYGKRYNAITGG GHNNLFQDKDGNWWATMFFNPRGAQAAEYKVTCRPGLIPMLYENGKFKPNHNYQAK
Sequences:
>Translated_376_residues MKFILRLGLALLTGFVSVSTASAQAYGTADTNAPELRVPKSVQPAFDYWMRDTWATLGPDGYYYITGTTSTPDRHFPGQR HCWDWNDGLYLWRSKDLKIWEAMGRIWSMEKDGTWQKDPKVYKEGEKYAKKSINNDPMDNRFHAVWAPEMHYIKSAKNWF IVACMNQSAGGRGSFILRSTTGKPEGPYENIEGNEDKAIFPNIDGSLFEDTDGTVYFVGHNHYIARMKPDMSGLAEEIKT LKESKYSPEPYVEGAFIFKYDGKYHLVQAIWAHRTVKGDTYVEKEGLTNKKTRYSYDCIIATADNVYGPYGKRYNAITGG GHNNLFQDKDGNWWATMFFNPRGAQAAEYKVTCRPGLIPMLYENGKFKPNHNYQAK >Mature_376_residues MKFILRLGLALLTGFVSVSTASAQAYGTADTNAPELRVPKSVQPAFDYWMRDTWATLGPDGYYYITGTTSTPDRHFPGQR HCWDWNDGLYLWRSKDLKIWEAMGRIWSMEKDGTWQKDPKVYKEGEKYAKKSINNDPMDNRFHAVWAPEMHYIKSAKNWF IVACMNQSAGGRGSFILRSTTGKPEGPYENIEGNEDKAIFPNIDGSLFEDTDGTVYFVGHNHYIARMKPDMSGLAEEIKT LKESKYSPEPYVEGAFIFKYDGKYHLVQAIWAHRTVKGDTYVEKEGLTNKKTRYSYDCIIATADNVYGPYGKRYNAITGG GHNNLFQDKDGNWWATMFFNPRGAQAAEYKVTCRPGLIPMLYENGKFKPNHNYQAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42989; Mature: 42989
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFILRLGLALLTGFVSVSTASAQAYGTADTNAPELRVPKSVQPAFDYWMRDTWATLGPD CHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCC GYYYITGTTSTPDRHFPGQRHCWDWNDGLYLWRSKDLKIWEAMGRIWSMEKDGTWQKDPK CEEEEEECCCCCCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCH VYKEGEKYAKKSINNDPMDNRFHAVWAPEMHYIKSAKNWFIVACMNQSAGGRGSFILRST HHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHCCCCEEEEEEECCCCCCCCEEEEEEC TGKPEGPYENIEGNEDKAIFPNIDGSLFEDTDGTVYFVGHNHYIARMKPDMSGLAEEIKT CCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCEEEEEECCEEEEEECCCHHHHHHHHHH LKESKYSPEPYVEGAFIFKYDGKYHLVQAIWAHRTVKGDTYVEKEGLTNKKTRYSYDCII HHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCEECCCCEEECCCCCCCCCEEEEEEEE ATADNVYGPYGKRYNAITGGGHNNLFQDKDGNWWATMFFNPRGAQAAEYKVTCRPGLIPM EECCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEE LYENGKFKPNHNYQAK EECCCCCCCCCCCCCC >Mature Secondary Structure MKFILRLGLALLTGFVSVSTASAQAYGTADTNAPELRVPKSVQPAFDYWMRDTWATLGPD CHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCC GYYYITGTTSTPDRHFPGQRHCWDWNDGLYLWRSKDLKIWEAMGRIWSMEKDGTWQKDPK CEEEEEECCCCCCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCH VYKEGEKYAKKSINNDPMDNRFHAVWAPEMHYIKSAKNWFIVACMNQSAGGRGSFILRST HHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHCCCCEEEEEEECCCCCCCCEEEEEEC TGKPEGPYENIEGNEDKAIFPNIDGSLFEDTDGTVYFVGHNHYIARMKPDMSGLAEEIKT CCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCEEEEEECCEEEEEECCCHHHHHHHHHH LKESKYSPEPYVEGAFIFKYDGKYHLVQAIWAHRTVKGDTYVEKEGLTNKKTRYSYDCII HHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCEECCCCEEECCCCCCCCCEEEEEEEE ATADNVYGPYGKRYNAITGGGHNNLFQDKDGNWWATMFFNPRGAQAAEYKVTCRPGLIPM EECCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEE LYENGKFKPNHNYQAK EECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA