| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348469
Identifier: 29348469
GI number: 29348469
Start: 3881969
End: 3882883
Strand: Reverse
Name: 29348469
Synonym: BT_3060
Alternate gene names: NA
Gene position: 3882883-3881969 (Counterclockwise)
Preceding gene: 29348470
Following gene: 29348468
Centisome position: 62.02
GC content: 46.99
Gene sequence:
>915_bases ATGCTGACCGGATGTAGCCGTCGCGAACTATTGGATGATTATCCCGTAAGCGGGGTAGATATAAAGTTAGATTGGAACGG TGTTACCGATAAGTTGCCGGAAGGGGTTCGGGTGATTTTTTATCCGAAGAGTGCGGAAGGCAGAAAGATTGATACATACC TTTCAGTAAGAGGTGGAAAAGTAAAGGTGCCGCCGGGGCGTTACTCGGTAGTGGCTTACAACTACGACACTGAAACGGTG CAGATCAGAGGAGAGGAAGCCTATGAGACGATTGAAGCATTTACAGGCTATTGCAATGGTCTGGGAATAGCGGGAACGGA GAAAATGGTATGGGGACCTGATCCCTTATACGTAGTGCAGATCGATGATTTACATATAGCGAACAGTGAAGAAGAGCTTC TACTGGATTGGAAACCGAAATTAGTGGTAAAGACCTATTTTTTCAAGATCAAGGTGGAAGGACTGGAATATGTTTCTTCA ATTGTAGGCAGTGTGGAAGGTATGGCGGGTTGTTACTGTTTGGGCAGATGTTGCGGGATGATGTGCGATGCTCCTATTTA CTTTGAGGCGCAAGGGCGTTCGGGTGAAGTAACGGGTAGTTTTACTGCTTTTGGAATGCCGGAGGCCGCGATAAGCCGGG CAGGTGACAAGATAAAGCTGACACTGGCTTTTATTAAAGTAGATAAAACCGTGCAGAAAGCGGAGATTGATATAACGGAG GTGGTTACTAATTCTGAGAGTGGAGGTAGTGGAGGAGGAAATGTTGATGAACCTCCCACGGAAATAGAGTTGCCACTTGA TGAAAAGGTTAAGGTTGAGAAGCCGACTACTAATCCGGATGGCGGAGGTGGTGGTATTGGTGGAGATGTTGGTGATTGGG GCGATGAGGATGAAGTGGTTCTGCCTGTTGAGTGA
Upstream 100 bases:
>100_bases AAGGCGAAAGTCTCTCTGGTATGGCTGATAAAAAGAGGGAGATAAGGACGTTATGCAAGATACAAGATACATACTTCTTG TGCTTCTGTCCTCGCTGCTG
Downstream 100 bases:
>100_bases GATTAAACATAAACAAATATAACAATATTAACGAATTAAAAAATACAATTATGAAAAAGATTTTATTGGCTATTGCAGCA GTTGCAACAATTACAGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MLTGCSRRELLDDYPVSGVDIKLDWNGVTDKLPEGVRVIFYPKSAEGRKIDTYLSVRGGKVKVPPGRYSVVAYNYDTETV QIRGEEAYETIEAFTGYCNGLGIAGTEKMVWGPDPLYVVQIDDLHIANSEEELLLDWKPKLVVKTYFFKIKVEGLEYVSS IVGSVEGMAGCYCLGRCCGMMCDAPIYFEAQGRSGEVTGSFTAFGMPEAAISRAGDKIKLTLAFIKVDKTVQKAEIDITE VVTNSESGGSGGGNVDEPPTEIELPLDEKVKVEKPTTNPDGGGGGIGGDVGDWGDEDEVVLPVE
Sequences:
>Translated_304_residues MLTGCSRRELLDDYPVSGVDIKLDWNGVTDKLPEGVRVIFYPKSAEGRKIDTYLSVRGGKVKVPPGRYSVVAYNYDTETV QIRGEEAYETIEAFTGYCNGLGIAGTEKMVWGPDPLYVVQIDDLHIANSEEELLLDWKPKLVVKTYFFKIKVEGLEYVSS IVGSVEGMAGCYCLGRCCGMMCDAPIYFEAQGRSGEVTGSFTAFGMPEAAISRAGDKIKLTLAFIKVDKTVQKAEIDITE VVTNSESGGSGGGNVDEPPTEIELPLDEKVKVEKPTTNPDGGGGGIGGDVGDWGDEDEVVLPVE >Mature_304_residues MLTGCSRRELLDDYPVSGVDIKLDWNGVTDKLPEGVRVIFYPKSAEGRKIDTYLSVRGGKVKVPPGRYSVVAYNYDTETV QIRGEEAYETIEAFTGYCNGLGIAGTEKMVWGPDPLYVVQIDDLHIANSEEELLLDWKPKLVVKTYFFKIKVEGLEYVSS IVGSVEGMAGCYCLGRCCGMMCDAPIYFEAQGRSGEVTGSFTAFGMPEAAISRAGDKIKLTLAFIKVDKTVQKAEIDITE VVTNSESGGSGGGNVDEPPTEIELPLDEKVKVEKPTTNPDGGGGGIGGDVGDWGDEDEVVLPVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32864; Mature: 32864
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS00022 EGF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGCSRRELLDDYPVSGVDIKLDWNGVTDKLPEGVRVIFYPKSAEGRKIDTYLSVRGGK CCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCE VKVPPGRYSVVAYNYDTETVQIRGEEAYETIEAFTGYCNGLGIAGTEKMVWGPDPLYVVQ EECCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEE IDDLHIANSEEELLLDWKPKLVVKTYFFKIKVEGLEYVSSIVGSVEGMAGCYCLGRCCGM ECCEEECCCCCEEEEECCCCEEEEEEEEEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHH MCDAPIYFEAQGRSGEVTGSFTAFGMPEAAISRAGDKIKLTLAFIKVDKTVQKAEIDITE HCCCCEEEEECCCCCCEEEEEEECCCCHHHHHCCCCEEEEEEEEEEECCCHHHHCCEEEH VVTNSESGGSGGGNVDEPPTEIELPLDEKVKVEKPTTNPDGGGGGIGGDVGDWGDEDEVV EEECCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE LPVE EECC >Mature Secondary Structure MLTGCSRRELLDDYPVSGVDIKLDWNGVTDKLPEGVRVIFYPKSAEGRKIDTYLSVRGGK CCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCE VKVPPGRYSVVAYNYDTETVQIRGEEAYETIEAFTGYCNGLGIAGTEKMVWGPDPLYVVQ EECCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEE IDDLHIANSEEELLLDWKPKLVVKTYFFKIKVEGLEYVSSIVGSVEGMAGCYCLGRCCGM ECCEEECCCCCEEEEECCCCEEEEEEEEEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHH MCDAPIYFEAQGRSGEVTGSFTAFGMPEAAISRAGDKIKLTLAFIKVDKTVQKAEIDITE HCCCCEEEEECCCCCCEEEEEEECCCCHHHHHCCCCEEEEEEEEEEECCCHHHHCCEEEH VVTNSESGGSGGGNVDEPPTEIELPLDEKVKVEKPTTNPDGGGGGIGGDVGDWGDEDEVV EEECCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE LPVE EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA