| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348468
Identifier: 29348468
GI number: 29348468
Start: 3880944
End: 3881918
Strand: Reverse
Name: 29348468
Synonym: BT_3059
Alternate gene names: NA
Gene position: 3881918-3880944 (Counterclockwise)
Preceding gene: 29348469
Following gene: 29348467
Centisome position: 62.01
GC content: 39.08
Gene sequence:
>975_bases ATGAAAAAGATTTTATTGGCTATTGCAGCAGTTGCAACAATTACAGGTTGTTCACAGAGTGAAGAGTTTGAGAATCCGGG ACAAAAGGCGGAAATTAATTTTAGTACAGCAGTAACTAGAGCAACTGCACTTGATACAGAAGGTTTACAAAATGCTGGTT TCCAGGTTTATGCATATAATACAGGAACGACAGAAATGTCTACTACTGCGGTTCTTCCGTCTTCAGCATGGATAGCTAAT AAGGCAACTTATGCTAGTACTTGGTCAGTAGCAGGAGGTCCGTATTACTGGCCATTAGATGAAAATTTACAGTTTTTTGC TTATTCTCCGTCAGATGGAGTTACATATACTGGTCCTGATGGTACTATTGCGGGATATCCTAAATTTACTTATAAAGTAG GGGATACGGCTGCCGATCAAAAAGACTTAGTTATTTCGTCCGTGTTGAATCAGACTAAGGAAACGGATAAAACAGCACCA GTTGTTTCGTTAAATTTTAAACATGCATTGACTCAAATTAATGTTCAGGTGATTAAAGGAAGTACAGATTATACCTACGA ATTTGCAGCTGATAATGCTGTTACAATAAGTGGCATTAAAGGCGAAGGAACCTTTGCTTATACAGGAGCTGACACTGGCG ATTGGACGCCAGAAGGCACTGAAGCGACGTATACATATACTTTAGGTGATTTTACTGACGGGACAAGTGCCATTGTTCCT GGTAATGCACTGATGTTGATACCACAAGATATTACTGATGCTAAAATAACGATTAGGTATAACACAAAGAAGGGCGATAG CTATATATTTAAAGGATCAAAAGAGATTCCTTTGAAGTCTACCACAGCATGGGCTTTTGGAACTAAAATTTTGTATAAGC TGACTTTACCGGTTGGTGGTGAAGAAGTAAAGATCGAAGCGACAGCTGCTAAATGGGATACTGAAAAGCCTGAAACTACC GAACCTAGCGTTTAA
Upstream 100 bases:
>100_bases ATGTTGGTGATTGGGGCGATGAGGATGAAGTGGTTCTGCCTGTTGAGTGAGATTAAACATAAACAAATATAACAATATTA ACGAATTAAAAAATACAATT
Downstream 100 bases:
>100_bases TGTATTAATAGAATAATATTTCTCAGGTTATAGTCTTTTATACCAGTTTATGTAGTTTTGAATTTATAAGATCATTCTCG TTACGACATATTGCAACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKKILLAIAAVATITGCSQSEEFENPGQKAEINFSTAVTRATALDTEGLQNAGFQVYAYNTGTTEMSTTAVLPSSAWIAN KATYASTWSVAGGPYYWPLDENLQFFAYSPSDGVTYTGPDGTIAGYPKFTYKVGDTAADQKDLVISSVLNQTKETDKTAP VVSLNFKHALTQINVQVIKGSTDYTYEFAADNAVTISGIKGEGTFAYTGADTGDWTPEGTEATYTYTLGDFTDGTSAIVP GNALMLIPQDITDAKITIRYNTKKGDSYIFKGSKEIPLKSTTAWAFGTKILYKLTLPVGGEEVKIEATAAKWDTEKPETT EPSV
Sequences:
>Translated_324_residues MKKILLAIAAVATITGCSQSEEFENPGQKAEINFSTAVTRATALDTEGLQNAGFQVYAYNTGTTEMSTTAVLPSSAWIAN KATYASTWSVAGGPYYWPLDENLQFFAYSPSDGVTYTGPDGTIAGYPKFTYKVGDTAADQKDLVISSVLNQTKETDKTAP VVSLNFKHALTQINVQVIKGSTDYTYEFAADNAVTISGIKGEGTFAYTGADTGDWTPEGTEATYTYTLGDFTDGTSAIVP GNALMLIPQDITDAKITIRYNTKKGDSYIFKGSKEIPLKSTTAWAFGTKILYKLTLPVGGEEVKIEATAAKWDTEKPETT EPSV >Mature_324_residues MKKILLAIAAVATITGCSQSEEFENPGQKAEINFSTAVTRATALDTEGLQNAGFQVYAYNTGTTEMSTTAVLPSSAWIAN KATYASTWSVAGGPYYWPLDENLQFFAYSPSDGVTYTGPDGTIAGYPKFTYKVGDTAADQKDLVISSVLNQTKETDKTAP VVSLNFKHALTQINVQVIKGSTDYTYEFAADNAVTISGIKGEGTFAYTGADTGDWTPEGTEATYTYTLGDFTDGTSAIVP GNALMLIPQDITDAKITIRYNTKKGDSYIFKGSKEIPLKSTTAWAFGTKILYKLTLPVGGEEVKIEATAAKWDTEKPETT EPSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34778; Mature: 34778
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLAIAAVATITGCSQSEEFENPGQKAEINFSTAVTRATALDTEGLQNAGFQVYAYN CHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEHHHEEEEEECCCCCCCCCCEEEEEEE TGTTEMSTTAVLPSSAWIANKATYASTWSVAGGPYYWPLDENLQFFAYSPSDGVTYTGPD CCCCCCEEEEECCCCCEEECCCEEEEEEECCCCCEEECCCCCCEEEEECCCCCCEEECCC GTIAGYPKFTYKVGDTAADQKDLVISSVLNQTKETDKTAPVVSLNFKHALTQINVQVIKG CCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHEEEEEEEEEEEC STDYTYEFAADNAVTISGIKGEGTFAYTGADTGDWTPEGTEATYTYTLGDFTDGTSAIVP CCCEEEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEC GNALMLIPQDITDAKITIRYNTKKGDSYIFKGSKEIPLKSTTAWAFGTKILYKLTLPVGG CCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEHHHCCEEEEEEECCCCC EEVKIEATAAKWDTEKPETTEPSV CEEEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MKKILLAIAAVATITGCSQSEEFENPGQKAEINFSTAVTRATALDTEGLQNAGFQVYAYN CHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEHHHEEEEEECCCCCCCCCCEEEEEEE TGTTEMSTTAVLPSSAWIANKATYASTWSVAGGPYYWPLDENLQFFAYSPSDGVTYTGPD CCCCCCEEEEECCCCCEEECCCEEEEEEECCCCCEEECCCCCCEEEEECCCCCCEEECCC GTIAGYPKFTYKVGDTAADQKDLVISSVLNQTKETDKTAPVVSLNFKHALTQINVQVIKG CCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHEEEEEEEEEEEC STDYTYEFAADNAVTISGIKGEGTFAYTGADTGDWTPEGTEATYTYTLGDFTDGTSAIVP CCCEEEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEC GNALMLIPQDITDAKITIRYNTKKGDSYIFKGSKEIPLKSTTAWAFGTKILYKLTLPVGG CCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEHHHCCEEEEEEECCCCC EEVKIEATAAKWDTEKPETTEPSV CEEEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA