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The map label for this gene is 29348452

Identifier: 29348452

GI number: 29348452

Start: 3852033

End: 3853619

Strand: Reverse

Name: 29348452

Synonym: BT_3043

Alternate gene names: NA

Gene position: 3853619-3852033 (Counterclockwise)

Preceding gene: 29348453

Following gene: 29348451

Centisome position: 61.56

GC content: 50.35

Gene sequence:

>1587_bases
ATGAACTATAAATTACTGTCAGTCGCCTTAGCTTTTTTATATATAGGTATGGTAGGCGGATGTTCCCAACCCGCCCCCGA
CCTGCGTTATCAGATTGAAGTGGACAAACCTCTGCAGACAATGGAACACTTCGGCGCTTCCGATGCCTGGAGTATGCATA
TCCTTGGCTTGTGGCCGCAGGAGAAACAAAACCAGATAGCCGACTGGCTTTTCAGCACAGAGAACGATGCGAATGGAAAA
CCGAAAGGAATCGGCTTGTCTCTGTGGCGTTTCAACGTCGGGGCGGGCAGTACGGAACAAGGGGAAGCCAGTCAGATCGG
TTCTTCGTGGATGCGTACCGAATGTTTTCTGCAAGCCGACGGAACCTACGACTGGAACAAGCAACAGGGGCAACGCAACT
TTCTGAAACTGGCAAAAGAACGGGGCGTCACTAAATTCCTCGCATTTCTGAATTCCCCTCCCGTATATTATACTCAGAAC
GGTCTGGCTACCAATACCGGTCGTGGAGGAACCGCCAATCTGAAGCCGGAATGTTACGAGAAATATGCCCGTTTCCTGGC
CGATGTAGTAGAAGGAATAGAGAAGCACGACGGAATAAAGTTCAACTATATCTGTCCTTTCAACGAACCGGACGGGCATT
GGAACTGGGTAGGACCGAAGCAGGAAGGCTCTCCGGCAACCAATCGGGAAGTAGCCCGGACCGTCCGTTTGCTGAGCCGG
GAGTTTGTGAACCGGAAAATGGATACACAGATTATGGTGAACGAGTCTTCGGACTATCGCTGTATGCTCCGTACCCATCA
GACGGACTGGCAGCGTGGCTATCAGATTCAGGCTTTCTTCTGCCCGGACAGTGTGGATACGTATTTGGGTGATACGCCCA
ATGTGCCCCGACTGATGCTTGGTCATAGTTACTGGACAACGACTCCTCTGAGTGAACTGCGTGCCATGCGCTGCCAACTG
CGTGAAGCTCTGGATAAATACAACGTCGGCTTCTGGCAGTCAGAAACCTGTATCATGGGGAATGACGAAGAGATAGGCGG
CGGTCACGGCTTCGACCGTACGATGAAGACAGCACTTTACGTTGCCCGTATCATCCATCATGACATCGTATATGCGGGAG
CGAAGAGCTGGCAGTGGTGGCGTGCCATCGGCGGCGATTATAAAGACGGGCTGATTCGGGAATACACGAATGATGACTTG
AAGGATGGTCGGGTAGAAGACTCCAAACTCATGTGGGCTTTGGGTAATTATAGTCGCTTCATCCGTCCGGGAGCTGTCCG
CCTGTCGGTTTCTGCTTTCGATCAAGCGGGGAATTTAATCCCCGGAGGCGATACGGACCAAAAAGGACTGATGTGTTCTG
CTTATCAAAATGCGGACGGCTCATACGCTGTTGTTCTCATTAACTATGCGCAGGAAGACAAAGAGTTTTCAATCAATAAG
ATAAATGGCAAGAAAACTCGATGGCAGGTGTATCGCACTTCGGATGTAGAAGGAGAAGATCTGCTACCCGTTGAGAAAGT
GAAGAGTGGAAGAACAGTCCGGATTCCGGCACGTTCGATTATAACTTTATTGAATCAATCGCTTTAA

Upstream 100 bases:

>100_bases
GATTTGTGGTAGTTTTTGGTCGTTTTGTATTCCCTAAAGTTAGCCGTAATCACGTATTTTTGTACTATCACTTTAAAAAT
TATAAAAAACAAATTTCACG

Downstream 100 bases:

>100_bases
TATAAGAGTCAATTATGGGTTTGTCCGGTCGAATAAAAGGCCGGTATGTCGCCTTTTTCTTTTTTAAAGTATTACATTTG
TACGCCCGTCCATTGCTAAC

Product: putative xylanase

Products: NA

Alternate protein names: Xylanase; Beta-Glycosidase; O-Glycosyl Hydrolase-Like Protein; Glycoside Hydrolase Family; Fibronectin Type III Domain Protein; Glycoside Hydrolase Family 5 Protein; O-Glycosyl Hydrolase Family; Ricin B Lectin; Alpha-L-Arabinofuranosidase B; Ig Domain Protein; Glycoside Hydrolase; Secreted Endo-Beta-1 6-Galactanase

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MNYKLLSVALAFLYIGMVGGCSQPAPDLRYQIEVDKPLQTMEHFGASDAWSMHILGLWPQEKQNQIADWLFSTENDANGK
PKGIGLSLWRFNVGAGSTEQGEASQIGSSWMRTECFLQADGTYDWNKQQGQRNFLKLAKERGVTKFLAFLNSPPVYYTQN
GLATNTGRGGTANLKPECYEKYARFLADVVEGIEKHDGIKFNYICPFNEPDGHWNWVGPKQEGSPATNREVARTVRLLSR
EFVNRKMDTQIMVNESSDYRCMLRTHQTDWQRGYQIQAFFCPDSVDTYLGDTPNVPRLMLGHSYWTTTPLSELRAMRCQL
REALDKYNVGFWQSETCIMGNDEEIGGGHGFDRTMKTALYVARIIHHDIVYAGAKSWQWWRAIGGDYKDGLIREYTNDDL
KDGRVEDSKLMWALGNYSRFIRPGAVRLSVSAFDQAGNLIPGGDTDQKGLMCSAYQNADGSYAVVLINYAQEDKEFSINK
INGKKTRWQVYRTSDVEGEDLLPVEKVKSGRTVRIPARSIITLLNQSL

Sequences:

>Translated_528_residues
MNYKLLSVALAFLYIGMVGGCSQPAPDLRYQIEVDKPLQTMEHFGASDAWSMHILGLWPQEKQNQIADWLFSTENDANGK
PKGIGLSLWRFNVGAGSTEQGEASQIGSSWMRTECFLQADGTYDWNKQQGQRNFLKLAKERGVTKFLAFLNSPPVYYTQN
GLATNTGRGGTANLKPECYEKYARFLADVVEGIEKHDGIKFNYICPFNEPDGHWNWVGPKQEGSPATNREVARTVRLLSR
EFVNRKMDTQIMVNESSDYRCMLRTHQTDWQRGYQIQAFFCPDSVDTYLGDTPNVPRLMLGHSYWTTTPLSELRAMRCQL
REALDKYNVGFWQSETCIMGNDEEIGGGHGFDRTMKTALYVARIIHHDIVYAGAKSWQWWRAIGGDYKDGLIREYTNDDL
KDGRVEDSKLMWALGNYSRFIRPGAVRLSVSAFDQAGNLIPGGDTDQKGLMCSAYQNADGSYAVVLINYAQEDKEFSINK
INGKKTRWQVYRTSDVEGEDLLPVEKVKSGRTVRIPARSIITLLNQSL
>Mature_528_residues
MNYKLLSVALAFLYIGMVGGCSQPAPDLRYQIEVDKPLQTMEHFGASDAWSMHILGLWPQEKQNQIADWLFSTENDANGK
PKGIGLSLWRFNVGAGSTEQGEASQIGSSWMRTECFLQADGTYDWNKQQGQRNFLKLAKERGVTKFLAFLNSPPVYYTQN
GLATNTGRGGTANLKPECYEKYARFLADVVEGIEKHDGIKFNYICPFNEPDGHWNWVGPKQEGSPATNREVARTVRLLSR
EFVNRKMDTQIMVNESSDYRCMLRTHQTDWQRGYQIQAFFCPDSVDTYLGDTPNVPRLMLGHSYWTTTPLSELRAMRCQL
REALDKYNVGFWQSETCIMGNDEEIGGGHGFDRTMKTALYVARIIHHDIVYAGAKSWQWWRAIGGDYKDGLIREYTNDDL
KDGRVEDSKLMWALGNYSRFIRPGAVRLSVSAFDQAGNLIPGGDTDQKGLMCSAYQNADGSYAVVLINYAQEDKEFSINK
INGKKTRWQVYRTSDVEGEDLLPVEKVKSGRTVRIPARSIITLLNQSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59842; Mature: 59842

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKLLSVALAFLYIGMVGGCSQPAPDLRYQIEVDKPLQTMEHFGASDAWSMHILGLWPQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEEEEECCCC
EKQNQIADWLFSTENDANGKPKGIGLSLWRFNVGAGSTEQGEASQIGSSWMRTECFLQAD
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEEC
GTYDWNKQQGQRNFLKLAKERGVTKFLAFLNSPPVYYTQNGLATNTGRGGTANLKPECYE
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCHHHHH
KYARFLADVVEGIEKHDGIKFNYICPFNEPDGHWNWVGPKQEGSPATNREVARTVRLLSR
HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
EFVNRKMDTQIMVNESSDYRCMLRTHQTDWQRGYQIQAFFCPDSVDTYLGDTPNVPRLML
HHHCCCCCCEEEEECCCCCEEEEEECCCHHHCCCEEEEEECCCCHHHHCCCCCCCCCEEE
GHSYWTTTPLSELRAMRCQLREALDKYNVGFWQSETCIMGNDEEIGGGHGFDRTMKTALY
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHH
VARIIHHDIVYAGAKSWQWWRAIGGDYKDGLIREYTNDDLKDGRVEDSKLMWALGNYSRF
HHHHHHHHHHEECCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCHHH
IRPGAVRLSVSAFDQAGNLIPGGDTDQKGLMCSAYQNADGSYAVVLINYAQEDKEFSINK
CCCCEEEEEEEHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEE
INGKKTRWQVYRTSDVEGEDLLPVEKVKSGRTVRIPARSIITLLNQSL
CCCCCEEEEEEEECCCCCCCCCCHHHHCCCCEEEECHHHHHHHHHCCC
>Mature Secondary Structure
MNYKLLSVALAFLYIGMVGGCSQPAPDLRYQIEVDKPLQTMEHFGASDAWSMHILGLWPQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEEEEECCCC
EKQNQIADWLFSTENDANGKPKGIGLSLWRFNVGAGSTEQGEASQIGSSWMRTECFLQAD
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEEC
GTYDWNKQQGQRNFLKLAKERGVTKFLAFLNSPPVYYTQNGLATNTGRGGTANLKPECYE
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCHHHHH
KYARFLADVVEGIEKHDGIKFNYICPFNEPDGHWNWVGPKQEGSPATNREVARTVRLLSR
HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
EFVNRKMDTQIMVNESSDYRCMLRTHQTDWQRGYQIQAFFCPDSVDTYLGDTPNVPRLML
HHHCCCCCCEEEEECCCCCEEEEEECCCHHHCCCEEEEEECCCCHHHHCCCCCCCCCEEE
GHSYWTTTPLSELRAMRCQLREALDKYNVGFWQSETCIMGNDEEIGGGHGFDRTMKTALY
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHH
VARIIHHDIVYAGAKSWQWWRAIGGDYKDGLIREYTNDDLKDGRVEDSKLMWALGNYSRF
HHHHHHHHHHEECCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCHHH
IRPGAVRLSVSAFDQAGNLIPGGDTDQKGLMCSAYQNADGSYAVVLINYAQEDKEFSINK
CCCCEEEEEEEHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEE
INGKKTRWQVYRTSDVEGEDLLPVEKVKSGRTVRIPARSIITLLNQSL
CCCCCEEEEEEEECCCCCCCCCCHHHHCCCCEEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA