| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348453
Identifier: 29348453
GI number: 29348453
Start: 3853871
End: 3854758
Strand: Reverse
Name: 29348453
Synonym: BT_3044
Alternate gene names: NA
Gene position: 3854758-3853871 (Counterclockwise)
Preceding gene: 29348454
Following gene: 29348452
Centisome position: 61.57
GC content: 39.19
Gene sequence:
>888_bases ATGAATATCAATAAAATACTATATCCGATACTTTTGTTATTGGTCGTTTTAAGTAGCTGTGATTATGAAAGCCCGCTTGA TAAGGAGCAATATAAGAAGACACTCTATCTGATCGGCGCTTCCAGCAATCTTGTGACTAAAGAACTTGCTTATAGCAGTG AAGTGCAGGAAGGATTCATTACAGTGGGTGTAAGTGGCTCTCTTTTGATTGACGGGAATGTGGATGTGACTCTGGAAAGC CATAACAGTGTAATTGACTGGTATAATAAAAAGTTCAAGTTCCTTGCGACTGATATCAAATATCAGGGACTTGCTACCAG TGCTTTTGAGGTACCTTCTTATACTACTACATTGAAAGCCGGCGAAACTTATGCGAGAGTTCCCTTTAAAGTTAAAACAG AAGGTCTGGAGTGCGATTCGCTCTATGCGATAACTTTCAAGATTGCTTCTTCTTCTGCCGGTTATGAGATCAACCAGAAG GACTCGGCACTTATTGTATCCTTCAATCTGGTAAATAAATACTCAGGTAATTACATCTTCAAAGCTCTTCGGCACGAACT GGATAGTAATGATGAAATAGTTGCATCCACTTCTATTACTATAGTCAGAACATTGAAAGCTACAGAAGAAAATGCAGTGC GTTTCTATAACGAGCAACAGGCAGAAACAACTGCCAATATCAAGAAACATGCTGTTGTACTGAAAGTTGATGCTGGTAAC AATGTCACTATCTCGGCATGGGAGGACTTTGACTTGATTGATGGTACATGTACTTATAATCAGAACTCGAAAGTCTTTAA TGTAGATTATAAGTATACTGCGGATGGCAAGACTTATCAGATGGTGGGTACGTTTACCTATCAGGATGAAGATGCAGGTA GCAACTAA
Upstream 100 bases:
>100_bases TCGTACAACGATGGATAAGAACCCGAAACTGGTTCAGAATCCGGGATGGTAATTTTGCACACGAAGTACAGAATTAATAA TTAAGTAAAAAACGTTTGTT
Downstream 100 bases:
>100_bases ATGAGCTTATAAATCTGGTAACTGAATTAGGTTATCAGCAAGGTAGAAAAAGGTGTTGCTTTAAGTCGATGAAATAATAA CTGGCAGGTTTAAGGAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNINKILYPILLLLVVLSSCDYESPLDKEQYKKTLYLIGASSNLVTKELAYSSEVQEGFITVGVSGSLLIDGNVDVTLES HNSVIDWYNKKFKFLATDIKYQGLATSAFEVPSYTTTLKAGETYARVPFKVKTEGLECDSLYAITFKIASSSAGYEINQK DSALIVSFNLVNKYSGNYIFKALRHELDSNDEIVASTSITIVRTLKATEENAVRFYNEQQAETTANIKKHAVVLKVDAGN NVTISAWEDFDLIDGTCTYNQNSKVFNVDYKYTADGKTYQMVGTFTYQDEDAGSN
Sequences:
>Translated_295_residues MNINKILYPILLLLVVLSSCDYESPLDKEQYKKTLYLIGASSNLVTKELAYSSEVQEGFITVGVSGSLLIDGNVDVTLES HNSVIDWYNKKFKFLATDIKYQGLATSAFEVPSYTTTLKAGETYARVPFKVKTEGLECDSLYAITFKIASSSAGYEINQK DSALIVSFNLVNKYSGNYIFKALRHELDSNDEIVASTSITIVRTLKATEENAVRFYNEQQAETTANIKKHAVVLKVDAGN NVTISAWEDFDLIDGTCTYNQNSKVFNVDYKYTADGKTYQMVGTFTYQDEDAGSN >Mature_295_residues MNINKILYPILLLLVVLSSCDYESPLDKEQYKKTLYLIGASSNLVTKELAYSSEVQEGFITVGVSGSLLIDGNVDVTLES HNSVIDWYNKKFKFLATDIKYQGLATSAFEVPSYTTTLKAGETYARVPFKVKTEGLECDSLYAITFKIASSSAGYEINQK DSALIVSFNLVNKYSGNYIFKALRHELDSNDEIVASTSITIVRTLKATEENAVRFYNEQQAETTANIKKHAVVLKVDAGN NVTISAWEDFDLIDGTCTYNQNSKVFNVDYKYTADGKTYQMVGTFTYQDEDAGSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32844; Mature: 32844
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINKILYPILLLLVVLSSCDYESPLDKEQYKKTLYLIGASSNLVTKELAYSSEVQEGFI CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCEEEEEEECCCCCCHHHHHHHCCCCCCEE TVGVSGSLLIDGNVDVTLESHNSVIDWYNKKFKFLATDIKYQGLATSAFEVPSYTTTLKA EEECCCCEEECCCEEEEECCCCCEEECCCCEEEEEEECEEECCEEECEEECCCEEEEEEC GETYARVPFKVKTEGLECDSLYAITFKIASSSAGYEINQKDSALIVSFNLVNKYSGNYIF CCEEEECCEEEEECCCCCCCEEEEEEEEECCCCCEEECCCCCEEEEEEEEEECCCCCHHH KALRHELDSNDEIVASTSITIVRTLKATEENAVRFYNEQQAETTANIKKHAVVLKVDAGN HHHHHHCCCCCCEEEECEEEEEEEEECCCCCCEEEECCHHHHHHCCCEEEEEEEEEECCC NVTISAWEDFDLIDGTCTYNQNSKVFNVDYKYTADGKTYQMVGTFTYQDEDAGSN CEEEEEECCCCCCCCEEEECCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCCCC >Mature Secondary Structure MNINKILYPILLLLVVLSSCDYESPLDKEQYKKTLYLIGASSNLVTKELAYSSEVQEGFI CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCEEEEEEECCCCCCHHHHHHHCCCCCCEE TVGVSGSLLIDGNVDVTLESHNSVIDWYNKKFKFLATDIKYQGLATSAFEVPSYTTTLKA EEECCCCEEECCCEEEEECCCCCEEECCCCEEEEEEECEEECCEEECEEECCCEEEEEEC GETYARVPFKVKTEGLECDSLYAITFKIASSSAGYEINQKDSALIVSFNLVNKYSGNYIF CCEEEECCEEEEECCCCCCCEEEEEEEEECCCCCEEECCCCCEEEEEEEEEECCCCCHHH KALRHELDSNDEIVASTSITIVRTLKATEENAVRFYNEQQAETTANIKKHAVVLKVDAGN HHHHHHCCCCCCEEEECEEEEEEEEECCCCCCEEEECCHHHHHHCCCEEEEEEEEEECCC NVTISAWEDFDLIDGTCTYNQNSKVFNVDYKYTADGKTYQMVGTFTYQDEDAGSN CEEEEEECCCCCCCCEEEECCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA