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The map label for this gene is yjeP [H]

Identifier: 29348427

GI number: 29348427

Start: 3816241

End: 3818091

Strand: Reverse

Name: yjeP [H]

Synonym: BT_3018

Alternate gene names: 29348427

Gene position: 3818091-3816241 (Counterclockwise)

Preceding gene: 29348429

Following gene: 29348419

Centisome position: 60.99

GC content: 46.95

Gene sequence:

>1851_bases
ATGGATATGAAAAAAATAAAACGGTTTGCATTGCTGCTCATAATGGCTTCCCTTGCAGTCAATGTACAGGCGCAACTGGA
GCAGGCAGTCAAGAAGATTTTCGCCGGAGATACAGTAGCAACGCATCCAGTCTCTTTGCATCGGGATTCTGATTCTGCCC
GTGTGGCAAATCTGCAGAAATCATTGGAAGAAGCGCGGCTCAATGAAGCCAATATGCGTATGGAGATGGAGCAGATGAGG
CTTCAGATGCTGTCCGCCGATTCGGTGAAATTCTCCCAGCAACGGCAGCGTATCGACTCACTGCGTCAATTCACGAAAGG
AATACCGGTAGTTGCCGAAGGGGATACCCTGTTTTATCTTTTTACAAAACGGGGCGGATACACTCCCCAGCAACGGGCAC
AGATGACCGGTGCCGCTATCGAAGAGATAGGAAAGCGTTTTAATCTCCGTCCCGATTCCGTTTCCATCGACCATTCGGAT
ATTGTTTCCGACCTGATGTATGGCAATAAAGTATTGTTATCTCTTACAGATCAGGATGCTTTGTGGGAAGGAGTCTCCCG
TGACTCCCTTGCCAAAGAGAGGCGGCAGAATGTAATCACCAAACTGCATGAGATGAAAGCGGAGCACAGCATTTGGCGAA
TGGCGAAGCGTATCCTTTATTTTCTGTTGGTGATTGTCGGTCAGTATCTCCTTTTCCGTCTGACCAACTGGGCATTTCGC
AAACTGAAAGTACGTATCCTGCGTCTGAAAGATACAAAGATAAAGCCTGTGTCTATCCAGGGATATGAGTTGCTGGATGC
TCAAAAACAAGCCAATCTGTTAGTCTTTTTGGCAGGCATCGGACGTTATATCCTTATGGGGATACAACTGTTGATTACTG
TCCCTTTGATTTTTATCATCTTCCCGCAGACCGAAGGACTGGCATACCGCTTGCTGGGTTATATCTGGAATCCGATTCGG
AAAATCTTTGTGGATATAATAGACTATGTCCCCAATCTGTTTACAATTGTTGTTATCTGGTATGCGGTGAAGTATCTGGT
ACGTATGGTGCTTTATCTGGCTCGTGAGATAGAAGCGGGGCGTCTTAAATTCAACGGTTTTTACCCGGATTGGGCCATGC
CGACCTTCCACATCGTCCGGTTCCTGCTCTACGCATTTATGATCGCGATGATTTACCCTTATCTGCCGGGTTCTGATTCT
GGGGTATTCCAAGGGATTTCGGTCTTTGTCGGATTGATTGTCTCTCTTGGATCAAGTACCGTTATCGGAAATATTATTGC
CGGGCTGGTGATTACCTATATGCGCCCGTTCAAGATGGGCGACCGGATTAAACTGAACGATACCACCGGCGATATCATAG
AGAAGACGCCGCTTGTCACCCGTATCCGCACTCCGAAAAATGAGGTGGTGACGGTGCCCAACTCTTTTATCATGTCATCA
CATACCGTGAATTATAGTACATCGGCACGGGAGTATGGCTTGATTATCCATTCGGAGGTATCCATCGGTTATGATGTCCC
CTGGCGCCAGGTCAATCAGATACTGATTGATGCTGCGTTGAATACGCCCGGAGTAGTGGATGACCCGCGCCCGTTCGTGC
TGGAAACTTCGTTGAGCGACTGGTATCCGGTGTATCAGATCAATGCTTATATCAAGGAGGCGCATAAGATGTCTCAGATT
TATTCTGATTTGCATCAGACTATTCAGGATAAGTTTAATGAAGCGGGAATTGAGATTATGTCTCCGCATTACATGGCTGT
CCGTGATGGGAACGCAACGACGACTCCCAAGAATGATCTAAGCAAGAGTAACACTGCGGATACTGCTAGTCAGAGTAACA
AATCAGAATAA

Upstream 100 bases:

>100_bases
ATCATTTAGGGAATTGTTATGTCAAAAACAATCCGTATGTTTGCCATGTTTATTAAAAAGTGAAATTAAAGTTAATTCAC
CTAACTTGGAATCATTCTAT

Downstream 100 bases:

>100_bases
TATAAGCTCGTTACTTAATGAACTTGTGATTTTCTTTGCATCTGTCGGGGCAAAGGAGTACTATAATAAATCAGGGCGCC
CCCTTCATCGCGAAGGAGAC

Product: putative mechano-sensitive ion channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MDMKKIKRFALLLIMASLAVNVQAQLEQAVKKIFAGDTVATHPVSLHRDSDSARVANLQKSLEEARLNEANMRMEMEQMR
LQMLSADSVKFSQQRQRIDSLRQFTKGIPVVAEGDTLFYLFTKRGGYTPQQRAQMTGAAIEEIGKRFNLRPDSVSIDHSD
IVSDLMYGNKVLLSLTDQDALWEGVSRDSLAKERRQNVITKLHEMKAEHSIWRMAKRILYFLLVIVGQYLLFRLTNWAFR
KLKVRILRLKDTKIKPVSIQGYELLDAQKQANLLVFLAGIGRYILMGIQLLITVPLIFIIFPQTEGLAYRLLGYIWNPIR
KIFVDIIDYVPNLFTIVVIWYAVKYLVRMVLYLAREIEAGRLKFNGFYPDWAMPTFHIVRFLLYAFMIAMIYPYLPGSDS
GVFQGISVFVGLIVSLGSSTVIGNIIAGLVITYMRPFKMGDRIKLNDTTGDIIEKTPLVTRIRTPKNEVVTVPNSFIMSS
HTVNYSTSAREYGLIIHSEVSIGYDVPWRQVNQILIDAALNTPGVVDDPRPFVLETSLSDWYPVYQINAYIKEAHKMSQI
YSDLHQTIQDKFNEAGIEIMSPHYMAVRDGNATTTPKNDLSKSNTADTASQSNKSE

Sequences:

>Translated_616_residues
MDMKKIKRFALLLIMASLAVNVQAQLEQAVKKIFAGDTVATHPVSLHRDSDSARVANLQKSLEEARLNEANMRMEMEQMR
LQMLSADSVKFSQQRQRIDSLRQFTKGIPVVAEGDTLFYLFTKRGGYTPQQRAQMTGAAIEEIGKRFNLRPDSVSIDHSD
IVSDLMYGNKVLLSLTDQDALWEGVSRDSLAKERRQNVITKLHEMKAEHSIWRMAKRILYFLLVIVGQYLLFRLTNWAFR
KLKVRILRLKDTKIKPVSIQGYELLDAQKQANLLVFLAGIGRYILMGIQLLITVPLIFIIFPQTEGLAYRLLGYIWNPIR
KIFVDIIDYVPNLFTIVVIWYAVKYLVRMVLYLAREIEAGRLKFNGFYPDWAMPTFHIVRFLLYAFMIAMIYPYLPGSDS
GVFQGISVFVGLIVSLGSSTVIGNIIAGLVITYMRPFKMGDRIKLNDTTGDIIEKTPLVTRIRTPKNEVVTVPNSFIMSS
HTVNYSTSAREYGLIIHSEVSIGYDVPWRQVNQILIDAALNTPGVVDDPRPFVLETSLSDWYPVYQINAYIKEAHKMSQI
YSDLHQTIQDKFNEAGIEIMSPHYMAVRDGNATTTPKNDLSKSNTADTASQSNKSE
>Mature_616_residues
MDMKKIKRFALLLIMASLAVNVQAQLEQAVKKIFAGDTVATHPVSLHRDSDSARVANLQKSLEEARLNEANMRMEMEQMR
LQMLSADSVKFSQQRQRIDSLRQFTKGIPVVAEGDTLFYLFTKRGGYTPQQRAQMTGAAIEEIGKRFNLRPDSVSIDHSD
IVSDLMYGNKVLLSLTDQDALWEGVSRDSLAKERRQNVITKLHEMKAEHSIWRMAKRILYFLLVIVGQYLLFRLTNWAFR
KLKVRILRLKDTKIKPVSIQGYELLDAQKQANLLVFLAGIGRYILMGIQLLITVPLIFIIFPQTEGLAYRLLGYIWNPIR
KIFVDIIDYVPNLFTIVVIWYAVKYLVRMVLYLAREIEAGRLKFNGFYPDWAMPTFHIVRFLLYAFMIAMIYPYLPGSDS
GVFQGISVFVGLIVSLGSSTVIGNIIAGLVITYMRPFKMGDRIKLNDTTGDIIEKTPLVTRIRTPKNEVVTVPNSFIMSS
HTVNYSTSAREYGLIIHSEVSIGYDVPWRQVNQILIDAALNTPGVVDDPRPFVLETSLSDWYPVYQINAYIKEAHKMSQI
YSDLHQTIQDKFNEAGIEIMSPHYMAVRDGNATTTPKNDLSKSNTADTASQSNKSE

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI2367355, Length=189, Percent_Identity=24.3386243386243, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1786670, Length=200, Percent_Identity=23.5, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 70138; Mature: 70138

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMKKIKRFALLLIMASLAVNVQAQLEQAVKKIFAGDTVATHPVSLHRDSDSARVANLQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEECCCCHHHHHHHHH
SLEEARLNEANMRMEMEQMRLQMLSADSVKFSQQRQRIDSLRQFTKGIPVVAEGDTLFYL
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEE
FTKRGGYTPQQRAQMTGAAIEEIGKRFNLRPDSVSIDHSDIVSDLMYGNKVLLSLTDQDA
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHH
LWEGVSRDSLAKERRQNVITKLHEMKAEHSIWRMAKRILYFLLVIVGQYLLFRLTNWAFR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKVRILRLKDTKIKPVSIQGYELLDAQKQANLLVFLAGIGRYILMGIQLLITVPLIFII
HHHHEEEEEECCCCCEEEECCCHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHEE
FPQTEGLAYRLLGYIWNPIRKIFVDIIDYVPNLFTIVVIWYAVKYLVRMVLYLAREIEAG
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RLKFNGFYPDWAMPTFHIVRFLLYAFMIAMIYPYLPGSDSGVFQGISVFVGLIVSLGSST
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCH
VIGNIIAGLVITYMRPFKMGDRIKLNDTTGDIIEKTPLVTRIRTPKNEVVTVPNSFIMSS
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCCCEEECCCCCCEEECCCHHHHCC
HTVNYSTSAREYGLIIHSEVSIGYDVPWRQVNQILIDAALNTPGVVDDPRPFVLETSLSD
CEECCCCCCHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC
WYPVYQINAYIKEAHKMSQIYSDLHQTIQDKFNEAGIEIMSPHYMAVRDGNATTTPKNDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCC
SKSNTADTASQSNKSE
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDMKKIKRFALLLIMASLAVNVQAQLEQAVKKIFAGDTVATHPVSLHRDSDSARVANLQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEECCCCHHHHHHHHH
SLEEARLNEANMRMEMEQMRLQMLSADSVKFSQQRQRIDSLRQFTKGIPVVAEGDTLFYL
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEE
FTKRGGYTPQQRAQMTGAAIEEIGKRFNLRPDSVSIDHSDIVSDLMYGNKVLLSLTDQDA
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHH
LWEGVSRDSLAKERRQNVITKLHEMKAEHSIWRMAKRILYFLLVIVGQYLLFRLTNWAFR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKVRILRLKDTKIKPVSIQGYELLDAQKQANLLVFLAGIGRYILMGIQLLITVPLIFII
HHHHEEEEEECCCCCEEEECCCHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHEE
FPQTEGLAYRLLGYIWNPIRKIFVDIIDYVPNLFTIVVIWYAVKYLVRMVLYLAREIEAG
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RLKFNGFYPDWAMPTFHIVRFLLYAFMIAMIYPYLPGSDSGVFQGISVFVGLIVSLGSST
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCH
VIGNIIAGLVITYMRPFKMGDRIKLNDTTGDIIEKTPLVTRIRTPKNEVVTVPNSFIMSS
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCCCEEECCCCCCEEECCCHHHHCC
HTVNYSTSAREYGLIIHSEVSIGYDVPWRQVNQILIDAALNTPGVVDDPRPFVLETSLSD
CEECCCCCCHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC
WYPVYQINAYIKEAHKMSQIYSDLHQTIQDKFNEAGIEIMSPHYMAVRDGNATTTPKNDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCC
SKSNTADTASQSNKSE
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 3042771 [H]