| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348375
Identifier: 29348375
GI number: 29348375
Start: 3737421
End: 3738668
Strand: Reverse
Name: 29348375
Synonym: BT_2966
Alternate gene names: NA
Gene position: 3738668-3737421 (Counterclockwise)
Preceding gene: 29348376
Following gene: 29348374
Centisome position: 59.72
GC content: 40.38
Gene sequence:
>1248_bases ATGAAAAAGATAATATACAGTAGCCTTTTAGTACTAGCCATCACATTGCTGCCTAGTGCTTGCGATAACGATAGTGATAT GAATTCTCCCCATGGAAGTACGACTCCGCCTGAACAGGTAGTATTGAATGGTGTCAAAAATCTGCCGGGAAAGTCTATAA TCTATTTTACACAGCCCAGTGATAAGAATTTTCTTTATATGAAGGCTGTATATATGACAGAGATAGGAGAACGTTCGACC AATGCTTCGTATTTTGCCGACTCTGTAGTGGTGGAAGGATTTGAAAAAGCTGGTGAATATAATGTGAAGTTGTATTCTGT AAGTCCGGGTGAAGCCTATTCTGAACCTCTGGAAGTAAAAATAAATCCGGAAGAGCCGCCTTATATCACTGCTTATAAGG AGATGGAAATAAAACCGGATTTTGCCGGTATCCGGATAAAGACATCCAACACCAGCAATGAGACTCTTACTTTTTATGTG TACCGGAAGGATGCTACTGGAAAATGGACGGAAGCCGGAGCTTTATATACCAAAAAGCAAGAGATTAATGAGCCCATACG TGGTATGGAAGCCGTTCCTTCAGAATTTAGTGTGGTGGTGAAGGATAGGTGGGGACATCTTTCTGAAAGTAAGGAGATAT CTCTGACTCCATATTATGAAGAGGAAGTAGATAAGAAAAAAATGGGATACTTGGCCATTGGCGAATACAAAGGTTATCTG GCACCGAATGCTAATACCCCAAAGAATCTGTATGACGGAATTATTGGAAGCAATAATACTTTTATGACCCTCACAACGGC GGGATATGATTTTACCAAGCCGAGTTCGGTGACACTGGACTTAGGGAAGAAGTTTAAGCTCAGCCGTATGATTGTCTATG GAAGAAGAAATGGAACTGATTATTCATCTATATTTGACGGTCTGTATCCGAAAGAAATAGAAATTTGGGGACGAAATGAT AATAATGTAACCAAGTTTGATCCGGAAAATGATGAAGGATGGGTACGGTTATATCAAGGAGTATTGCCCAGAGCCGACGG TTCTGTTATTCCGGCGGCTATTGTCCCGTTAACTGATGCTGATAAGGAACTGGCAAGAGACGGCAATGAACTCGAATTTT CCGTAGATCTGGATGCATATAGATATGTGACGTTTGTTTGTATCAAGAATTATAATGTAGGAACATCTCGTATCAATGTG GCAGAACTTACTTTCTTTGGAACACCGGAGGATAAAATAATACAGTAA
Upstream 100 bases:
>100_bases CCAAAATGTATTTCTGGCCTATTGATATCGGTGAGTTGAGAAAAGATCCTAACTTAGTTCAAAATTATGGTTGGTAAGTA ATTAAAGTGACATTTGATTT
Downstream 100 bases:
>100_bases TCGCTATATAAAAGACAAATATTATGAAGAAATTTATATTTATATCAGTCAGCATCTTGATATTTTGTTCCATTATATCT TGCGAGTCAATGGATGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKKIIYSSLLVLAITLLPSACDNDSDMNSPHGSTTPPEQVVLNGVKNLPGKSIIYFTQPSDKNFLYMKAVYMTEIGERST NASYFADSVVVEGFEKAGEYNVKLYSVSPGEAYSEPLEVKINPEEPPYITAYKEMEIKPDFAGIRIKTSNTSNETLTFYV YRKDATGKWTEAGALYTKKQEINEPIRGMEAVPSEFSVVVKDRWGHLSESKEISLTPYYEEEVDKKKMGYLAIGEYKGYL APNANTPKNLYDGIIGSNNTFMTLTTAGYDFTKPSSVTLDLGKKFKLSRMIVYGRRNGTDYSSIFDGLYPKEIEIWGRND NNVTKFDPENDEGWVRLYQGVLPRADGSVIPAAIVPLTDADKELARDGNELEFSVDLDAYRYVTFVCIKNYNVGTSRINV AELTFFGTPEDKIIQ
Sequences:
>Translated_415_residues MKKIIYSSLLVLAITLLPSACDNDSDMNSPHGSTTPPEQVVLNGVKNLPGKSIIYFTQPSDKNFLYMKAVYMTEIGERST NASYFADSVVVEGFEKAGEYNVKLYSVSPGEAYSEPLEVKINPEEPPYITAYKEMEIKPDFAGIRIKTSNTSNETLTFYV YRKDATGKWTEAGALYTKKQEINEPIRGMEAVPSEFSVVVKDRWGHLSESKEISLTPYYEEEVDKKKMGYLAIGEYKGYL APNANTPKNLYDGIIGSNNTFMTLTTAGYDFTKPSSVTLDLGKKFKLSRMIVYGRRNGTDYSSIFDGLYPKEIEIWGRND NNVTKFDPENDEGWVRLYQGVLPRADGSVIPAAIVPLTDADKELARDGNELEFSVDLDAYRYVTFVCIKNYNVGTSRINV AELTFFGTPEDKIIQ >Mature_415_residues MKKIIYSSLLVLAITLLPSACDNDSDMNSPHGSTTPPEQVVLNGVKNLPGKSIIYFTQPSDKNFLYMKAVYMTEIGERST NASYFADSVVVEGFEKAGEYNVKLYSVSPGEAYSEPLEVKINPEEPPYITAYKEMEIKPDFAGIRIKTSNTSNETLTFYV YRKDATGKWTEAGALYTKKQEINEPIRGMEAVPSEFSVVVKDRWGHLSESKEISLTPYYEEEVDKKKMGYLAIGEYKGYL APNANTPKNLYDGIIGSNNTFMTLTTAGYDFTKPSSVTLDLGKKFKLSRMIVYGRRNGTDYSSIFDGLYPKEIEIWGRND NNVTKFDPENDEGWVRLYQGVLPRADGSVIPAAIVPLTDADKELARDGNELEFSVDLDAYRYVTFVCIKNYNVGTSRINV AELTFFGTPEDKIIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46566; Mature: 46566
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIYSSLLVLAITLLPSACDNDSDMNSPHGSTTPPEQVVLNGVKNLPGKSIIYFTQPS CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC DKNFLYMKAVYMTEIGERSTNASYFADSVVVEGFEKAGEYNVKLYSVSPGEAYSEPLEVK CCCEEEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHCCCEEEE INPEEPPYITAYKEMEIKPDFAGIRIKTSNTSNETLTFYVYRKDATGKWTEAGALYTKKQ ECCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEECHH EINEPIRGMEAVPSEFSVVVKDRWGHLSESKEISLTPYYEEEVDKKKMGYLAIGEYKGYL HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCHHHHCCHHHCCEEEEECCCCEE APNANTPKNLYDGIIGSNNTFMTLTTAGYDFTKPSSVTLDLGKKFKLSRMIVYGRRNGTD CCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCC YSSIFDGLYPKEIEIWGRNDNNVTKFDPENDEGWVRLYQGVLPRADGSVIPAAIVPLTDA HHHHHCCCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCC DKELARDGNELEFSVDLDAYRYVTFVCIKNYNVGTSRINVAELTFFGTPEDKIIQ CHHHHCCCCEEEEEEECCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCHHHCCC >Mature Secondary Structure MKKIIYSSLLVLAITLLPSACDNDSDMNSPHGSTTPPEQVVLNGVKNLPGKSIIYFTQPS CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC DKNFLYMKAVYMTEIGERSTNASYFADSVVVEGFEKAGEYNVKLYSVSPGEAYSEPLEVK CCCEEEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHCCCEEEE INPEEPPYITAYKEMEIKPDFAGIRIKTSNTSNETLTFYVYRKDATGKWTEAGALYTKKQ ECCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEECHH EINEPIRGMEAVPSEFSVVVKDRWGHLSESKEISLTPYYEEEVDKKKMGYLAIGEYKGYL HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCHHHHCCHHHCCEEEEECCCCEE APNANTPKNLYDGIIGSNNTFMTLTTAGYDFTKPSSVTLDLGKKFKLSRMIVYGRRNGTD CCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCC YSSIFDGLYPKEIEIWGRNDNNVTKFDPENDEGWVRLYQGVLPRADGSVIPAAIVPLTDA HHHHHCCCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCC DKELARDGNELEFSVDLDAYRYVTFVCIKNYNVGTSRINVAELTFFGTPEDKIIQ CHHHHCCCCEEEEEEECCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA