| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29348376
Identifier: 29348376
GI number: 29348376
Start: 3738692
End: 3740638
Strand: Reverse
Name: 29348376
Synonym: BT_2967
Alternate gene names: NA
Gene position: 3740638-3738692 (Counterclockwise)
Preceding gene: 29348377
Following gene: 29348375
Centisome position: 59.75
GC content: 42.01
Gene sequence:
>1947_bases ATGAAAAAAATCAAAATATGTATATTGTCATGTTTGTCGGTGTTTATATTGACATCATGTGAACTGAATATCGTCCCGGA TAACATACCGACCATTGAAGACCATGCTTTCGCCTTGAGAAAAGAAGCGGAAAAAGTCTTGTTTACTTGCTACAGGTATA TGCCTAGTGACGGAAGTCTCAAAAATAATGTAGCTTTGCTTGGTGCCGGTGATTTTTGTATTTCCGATGTTTTCCGGAGC TATTTGGGAACCAGCGCCTGGTATATAGCCCAAGGATTGCAAAAGTCCGATTCACCATATTGTGCTCAATGGGGACATTT ATATGAGGGAATTGCTTATTGTAATATTCTGATTGAGAATATACATACTACACCGGATATGGATGATAGCGAGAAAAACA GATGGATCGGTGAAGTGGAATTTTTGAAAGCTTATTATCATTTCTATCTGATCAGGATGTATGGACCGATTCCTATTATG GATCGATATGTTCCGGTAAGTAGTAGTACGGAGGAAATGCATCCTTATCGGGAGACATTGGACAGTTGTTTCAATTATGT GACAGAAACTTTGGACAAGGTGATTGCTAATCCGGATGTTCCGGCTAAAATAGAGAATGAAGCTGAAGAACTGGGACGAG TGACCGTAGGTATGGCTAAAGCATTGAAAGCGAAAGTTCTGGTAACCGCTGCAAGTCCATTGTTCAATGGAAATATGGAT TATGAGGTAATTGCAGATAATAGAGGTGTGAAAATCTTTAATCCGGTTAAAACGGAAGAGGAGAAGAAGCAGAAATGGGT AAAGGCTGCCGAAGCGTGTAAAGAAGCCATTACTTATCTCGAAGATTTGGGATTCGGTTTATATTATTTTGATGATCCCA CTGTGGTCATGACAGAGTCCGACAAGCTGATGATGAATTTGCGAGGTGCTGTCACTGAGAAGTGGAACAAAGAAGTGGTA TGGGCAAACTCTCAGTCATGGGTCGGTTCGGGTTCTTATGACAACTATCAGATACAGGCAATGCCGCGTGACTTGGTTCC CGGCAGAAATGCTAAGAATGCTACGAACAGAACCAATCTGGGTGTTTCTCTTGGACTGACTAACTCATTTTATACTAAAC ATGGGGTTCCTATAGAAGAAGATAAGACATGGGATTATGCTAATAGATTTGAAGTGCAGGCTCCCACGCCGGTGGAAGCT GAGCCCGGATATGAGAATACTATTATGCTGAATTATAAAACGGGAACAGTCAAATTGAATCTGGAACGTGAACACAGATA TTATGCCAGCTTAGGCTTTGACGGCGGTATTTGGTTCGGACAAGGAAAGACGGGACTTTCGGGCTTGTATTCGGTGAATG CGCGTAAAGGAGGAAATGTGTCTCCCATTCCGGCAGATCACTCTCAGAACCTGACTGGTATTTGGCCTAAGAAAGTGGTT AACTACAAGACGGTCATGTCCGATGCGGCTTCCGGATTTACATCGGTCACTTATCCGTTCCCTGTTATCCGTATGGCTGA TTTGTATTTGATGTATGCCGAAGCTTTAAATGAAAAAGGAGAGGATTATGCTACGGTATTGCCATGGATCGATATGGTGA GAGAACGTTCGGGACTTCAAGGCGTAAAAGAAAGTTGGGACCAATATGTAGGAAACAGCAAGTATGCTACTCAGACTGGT CTACGACAAATCATCATGCAGGAGCGTCGTATTGAGTTAGCATTTGAAGGACATTATTTTTGGGATGTCCGTCGGTGGAA AACTGCGACAACAGAATTGACACAGCCATTGACCGGTTGGAAAGTCCGTTATGGAGAAACTGATGTAGATTATTATAGTG AGAACTTAGTGCTTGTCCGGGATTTCACTCCCAAAATGTATTTCTGGCCTATTGATATCGGTGAGTTGAGAAAAGATCCT AACTTAGTTCAAAATTATGGTTGGTAA
Upstream 100 bases:
>100_bases TCAAGGATTGGGATGTGGAATTGGCAGGTAATGGTCTTAATTATCCGTTACAACGTGTATTCAATATTGGTGTAAATGTA AGTTTCTAAAAAGAATGGTT
Downstream 100 bases:
>100_bases GTAATTAAAGTGACATTTGATTTATGAAAAAGATAATATACAGTAGCCTTTTAGTACTAGCCATCACATTGCTGCCTAGT GCTTGCGATAACGATAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MKKIKICILSCLSVFILTSCELNIVPDNIPTIEDHAFALRKEAEKVLFTCYRYMPSDGSLKNNVALLGAGDFCISDVFRS YLGTSAWYIAQGLQKSDSPYCAQWGHLYEGIAYCNILIENIHTTPDMDDSEKNRWIGEVEFLKAYYHFYLIRMYGPIPIM DRYVPVSSSTEEMHPYRETLDSCFNYVTETLDKVIANPDVPAKIENEAEELGRVTVGMAKALKAKVLVTAASPLFNGNMD YEVIADNRGVKIFNPVKTEEEKKQKWVKAAEACKEAITYLEDLGFGLYYFDDPTVVMTESDKLMMNLRGAVTEKWNKEVV WANSQSWVGSGSYDNYQIQAMPRDLVPGRNAKNATNRTNLGVSLGLTNSFYTKHGVPIEEDKTWDYANRFEVQAPTPVEA EPGYENTIMLNYKTGTVKLNLEREHRYYASLGFDGGIWFGQGKTGLSGLYSVNARKGGNVSPIPADHSQNLTGIWPKKVV NYKTVMSDAASGFTSVTYPFPVIRMADLYLMYAEALNEKGEDYATVLPWIDMVRERSGLQGVKESWDQYVGNSKYATQTG LRQIIMQERRIELAFEGHYFWDVRRWKTATTELTQPLTGWKVRYGETDVDYYSENLVLVRDFTPKMYFWPIDIGELRKDP NLVQNYGW
Sequences:
>Translated_648_residues MKKIKICILSCLSVFILTSCELNIVPDNIPTIEDHAFALRKEAEKVLFTCYRYMPSDGSLKNNVALLGAGDFCISDVFRS YLGTSAWYIAQGLQKSDSPYCAQWGHLYEGIAYCNILIENIHTTPDMDDSEKNRWIGEVEFLKAYYHFYLIRMYGPIPIM DRYVPVSSSTEEMHPYRETLDSCFNYVTETLDKVIANPDVPAKIENEAEELGRVTVGMAKALKAKVLVTAASPLFNGNMD YEVIADNRGVKIFNPVKTEEEKKQKWVKAAEACKEAITYLEDLGFGLYYFDDPTVVMTESDKLMMNLRGAVTEKWNKEVV WANSQSWVGSGSYDNYQIQAMPRDLVPGRNAKNATNRTNLGVSLGLTNSFYTKHGVPIEEDKTWDYANRFEVQAPTPVEA EPGYENTIMLNYKTGTVKLNLEREHRYYASLGFDGGIWFGQGKTGLSGLYSVNARKGGNVSPIPADHSQNLTGIWPKKVV NYKTVMSDAASGFTSVTYPFPVIRMADLYLMYAEALNEKGEDYATVLPWIDMVRERSGLQGVKESWDQYVGNSKYATQTG LRQIIMQERRIELAFEGHYFWDVRRWKTATTELTQPLTGWKVRYGETDVDYYSENLVLVRDFTPKMYFWPIDIGELRKDP NLVQNYGW >Mature_648_residues MKKIKICILSCLSVFILTSCELNIVPDNIPTIEDHAFALRKEAEKVLFTCYRYMPSDGSLKNNVALLGAGDFCISDVFRS YLGTSAWYIAQGLQKSDSPYCAQWGHLYEGIAYCNILIENIHTTPDMDDSEKNRWIGEVEFLKAYYHFYLIRMYGPIPIM DRYVPVSSSTEEMHPYRETLDSCFNYVTETLDKVIANPDVPAKIENEAEELGRVTVGMAKALKAKVLVTAASPLFNGNMD YEVIADNRGVKIFNPVKTEEEKKQKWVKAAEACKEAITYLEDLGFGLYYFDDPTVVMTESDKLMMNLRGAVTEKWNKEVV WANSQSWVGSGSYDNYQIQAMPRDLVPGRNAKNATNRTNLGVSLGLTNSFYTKHGVPIEEDKTWDYANRFEVQAPTPVEA EPGYENTIMLNYKTGTVKLNLEREHRYYASLGFDGGIWFGQGKTGLSGLYSVNARKGGNVSPIPADHSQNLTGIWPKKVV NYKTVMSDAASGFTSVTYPFPVIRMADLYLMYAEALNEKGEDYATVLPWIDMVRERSGLQGVKESWDQYVGNSKYATQTG LRQIIMQERRIELAFEGHYFWDVRRWKTATTELTQPLTGWKVRYGETDVDYYSENLVLVRDFTPKMYFWPIDIGELRKDP NLVQNYGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73838; Mature: 73838
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKICILSCLSVFILTSCELNIVPDNIPTIEDHAFALRKEAEKVLFTCYRYMPSDGSL CCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC KNNVALLGAGDFCISDVFRSYLGTSAWYIAQGLQKSDSPYCAQWGHLYEGIAYCNILIEN CCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH IHTTPDMDDSEKNRWIGEVEFLKAYYHFYLIRMYGPIPIMDRYVPVSSSTEEMHPYRETL CCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCHHCCEECCCCCHHHCCHHHHHH DSCFNYVTETLDKVIANPDVPAKIENEAEELGRVTVGMAKALKAKVLVTAASPLFNGNMD HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCC YEVIADNRGVKIFNPVKTEEEKKQKWVKAAEACKEAITYLEDLGFGLYYFDDPTVVMTES EEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECC DKLMMNLRGAVTEKWNKEVVWANSQSWVGSGSYDNYQIQAMPRDLVPGRNAKNATNRTNL CCEEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCHHCCCCCCCCCCCCCCCC GVSLGLTNSFYTKHGVPIEEDKTWDYANRFEVQAPTPVEAEPGYENTIMLNYKTGTVKLN EEEEECCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCEEEEE LEREHRYYASLGFDGGIWFGQGKTGLSGLYSVNARKGGNVSPIPADHSQNLTGIWPKKVV EECCCEEEEEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH NYKTVMSDAASGFTSVTYPFPVIRMADLYLMYAEALNEKGEDYATVLPWIDMVRERSGLQ HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC GVKESWDQYVGNSKYATQTGLRQIIMQERRIELAFEGHYFWDVRRWKTATTELTQPLTGW HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCEEEEEEHHHHHHHHHHHCCCCCC KVRYGETDVDYYSENLVLVRDFTPKMYFWPIDIGELRKDPNLVQNYGW EEEECCCCCCEECCCEEEEEECCCCEEEEECCHHHHCCCCCHHHCCCC >Mature Secondary Structure MKKIKICILSCLSVFILTSCELNIVPDNIPTIEDHAFALRKEAEKVLFTCYRYMPSDGSL CCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC KNNVALLGAGDFCISDVFRSYLGTSAWYIAQGLQKSDSPYCAQWGHLYEGIAYCNILIEN CCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH IHTTPDMDDSEKNRWIGEVEFLKAYYHFYLIRMYGPIPIMDRYVPVSSSTEEMHPYRETL CCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCHHCCEECCCCCHHHCCHHHHHH DSCFNYVTETLDKVIANPDVPAKIENEAEELGRVTVGMAKALKAKVLVTAASPLFNGNMD HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCC YEVIADNRGVKIFNPVKTEEEKKQKWVKAAEACKEAITYLEDLGFGLYYFDDPTVVMTES EEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECC DKLMMNLRGAVTEKWNKEVVWANSQSWVGSGSYDNYQIQAMPRDLVPGRNAKNATNRTNL CCEEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCHHCCCCCCCCCCCCCCCC GVSLGLTNSFYTKHGVPIEEDKTWDYANRFEVQAPTPVEAEPGYENTIMLNYKTGTVKLN EEEEECCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCEEEEE LEREHRYYASLGFDGGIWFGQGKTGLSGLYSVNARKGGNVSPIPADHSQNLTGIWPKKVV EECCCEEEEEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH NYKTVMSDAASGFTSVTYPFPVIRMADLYLMYAEALNEKGEDYATVLPWIDMVRERSGLQ HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC GVKESWDQYVGNSKYATQTGLRQIIMQERRIELAFEGHYFWDVRRWKTATTELTQPLTGW HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCEEEEEEHHHHHHHHHHHCCCCCC KVRYGETDVDYYSENLVLVRDFTPKMYFWPIDIGELRKDPNLVQNYGW EEEECCCCCCEECCCEEEEEECCCCEEEEECCHHHHCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA