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The map label for this gene is ctpA [H]

Identifier: 29348207

GI number: 29348207

Start: 3471884

End: 3473581

Strand: Reverse

Name: ctpA [H]

Synonym: BT_2798

Alternate gene names: 29348207

Gene position: 3473581-3471884 (Counterclockwise)

Preceding gene: 29348208

Following gene: 29348206

Centisome position: 55.49

GC content: 44.23

Gene sequence:

>1698_bases
ATGAAAAAATTGCTGAATAGGCGGATAGCTCTTGTTTTGGTGGCTGTAATAGCTACTGTAGCTTTCTTTAGTTTTAAGAG
TGGAGACGACCGCAATTTCCAGATTGCCAAGAATCTGGATACATTTAATGCGATTGTGAAAGAACTGGATATGTTCTACG
TGGATACCATTGATCCGAACAAGACCATTCGCGAAGGAATCGACAATATGCTTTTCTCGCTGGATCCTTATACAGAATAT
TACCCGGAGGAAGATCAAAGCGAACTGGAACAGATGGTGAAAGGAAGCTTTGGAGGTATCGGTTCTCTTATTACCTATAA
TACGAAGCTGAAACGTTCCATGATTGCCGAACCGTTCGAGGGAACTCCGGCGGCCAAAGCGGGACTGAAGGCGGGAGATA
TCCTGATGGAAATAGACGGAAAAGATCTCCTTGGAAAGAATAATTCGGAAGTCAGCCAGATGTTGCGCGGACAGGCGGGT
ACGAGCTTTAAACTGAAAGTGGAGCGTCCTAATGAGAAAGGCGGACAAACCCCGATGGAGTTTACTATCGTACGTGAATC
TATTCAGACCCCTGCCATCCCATATGCTACCGTGATGGATAATAAAGTGGGATATATCAGCCTGAGCACATTCTCCGGCA
ACCCTTCCAAGGATTTCAAAAAAGCATTGCTGGATCTGAAGAAACAGGGAGCTACTTCTCTGGTCATCGACCTCCGTAAT
AACGGTGGCGGTCTGTTGGATGAAGCAGTGGAAATAGCCAATTATTTCCTGCCCCGTGGAAAAGTAATCGTAACCACCAA
GGGAAAGACGAAACAGGCAAGCAACACATACAAGACTTTGCGTGAACCGCTGGATCTGGATATTCCGATTGCCGTATTGG
TAAACAGTGGTACGGCTTCTGCTTCAGAAATCCTGTCGGGCTCATTGCAAGACCTTGATCGTGCCGTTATTGTTGGTAAC
CGTACATTTGGAAAGGGACTTGTACAGGTTCCCCGTTCTTTACCTTATGGAGGAATGATGAAAGTGACTACTTCCAAATA
TTATATCCCAAGCGGACGTTGTGTGCAGGCGATCGACTATAAGCACCGGAACGAAGATGGAAGTGTGGGAACGATTCCCG
ACAGTCTGACTAACGTATTCTATACTGCTGCCGGACGTGAAGTACGTGACGGAGGTGGTGTAATGCCTGATATTACTGTC
AAGCAGGAAAAACTCCCGAATATCTTGTTCTATCTCGTACGTGATAATCTGATTTTTGACTATGCAACTCAATACTGCTT
GAAGCATCCTACTGTAGCTGCTCCTGAAAAGTTTGTAGTGACGGATGCTGATTACAATGATTTCAAGGAACTGGTGAAGA
AGGCCGATTTCAAATATGACCAGCAGAGTGAGAAGATTCTGAAAACACTGAAAGAGGCTGCTGAATTTGAAGGCTATATG
ACAGATGCTGCCGAAGAGTTCAAGGCACTGGAAAAGAAGTTGAATCATAATCTTGACCGTGACCTGGATTATTTCTCTAA
GGATATCAAGAGAATGATTGCTAATGAAATTATCAAGCGTTATTATTTCCAGAGAGGTGGTATTATCGAGCAACTGAAGG
ATGATGATGATTTGCAGGAAGCAATAAAGGTATTGAATGATCCTGCGAAGTATAAGGAAATGCTGAGCGCGCCGATAACG
AAAGCTGAAAAGAAGTAA

Upstream 100 bases:

>100_bases
CTCCGGAGCGCTGGGATGAAATTAAGTTAAATATTAACAAGGTTCTGGCGGAATAACCAAGGTTTGAGTTACTTTTACGT
CTCATTTTAATGAAAGATAT

Downstream 100 bases:

>100_bases
CGTTGATTGTCATATATAAAATGCGGTGGACATTAGTAAGATGTTCACCGCATTTTATATATGCATATTATATTGGTTAG
CCAATGGGAGCCCGGTGTAA

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MKKLLNRRIALVLVAVIATVAFFSFKSGDDRNFQIAKNLDTFNAIVKELDMFYVDTIDPNKTIREGIDNMLFSLDPYTEY
YPEEDQSELEQMVKGSFGGIGSLITYNTKLKRSMIAEPFEGTPAAKAGLKAGDILMEIDGKDLLGKNNSEVSQMLRGQAG
TSFKLKVERPNEKGGQTPMEFTIVRESIQTPAIPYATVMDNKVGYISLSTFSGNPSKDFKKALLDLKKQGATSLVIDLRN
NGGGLLDEAVEIANYFLPRGKVIVTTKGKTKQASNTYKTLREPLDLDIPIAVLVNSGTASASEILSGSLQDLDRAVIVGN
RTFGKGLVQVPRSLPYGGMMKVTTSKYYIPSGRCVQAIDYKHRNEDGSVGTIPDSLTNVFYTAAGREVRDGGGVMPDITV
KQEKLPNILFYLVRDNLIFDYATQYCLKHPTVAAPEKFVVTDADYNDFKELVKKADFKYDQQSEKILKTLKEAAEFEGYM
TDAAEEFKALEKKLNHNLDRDLDYFSKDIKRMIANEIIKRYYFQRGGIIEQLKDDDDLQEAIKVLNDPAKYKEMLSAPIT
KAEKK

Sequences:

>Translated_565_residues
MKKLLNRRIALVLVAVIATVAFFSFKSGDDRNFQIAKNLDTFNAIVKELDMFYVDTIDPNKTIREGIDNMLFSLDPYTEY
YPEEDQSELEQMVKGSFGGIGSLITYNTKLKRSMIAEPFEGTPAAKAGLKAGDILMEIDGKDLLGKNNSEVSQMLRGQAG
TSFKLKVERPNEKGGQTPMEFTIVRESIQTPAIPYATVMDNKVGYISLSTFSGNPSKDFKKALLDLKKQGATSLVIDLRN
NGGGLLDEAVEIANYFLPRGKVIVTTKGKTKQASNTYKTLREPLDLDIPIAVLVNSGTASASEILSGSLQDLDRAVIVGN
RTFGKGLVQVPRSLPYGGMMKVTTSKYYIPSGRCVQAIDYKHRNEDGSVGTIPDSLTNVFYTAAGREVRDGGGVMPDITV
KQEKLPNILFYLVRDNLIFDYATQYCLKHPTVAAPEKFVVTDADYNDFKELVKKADFKYDQQSEKILKTLKEAAEFEGYM
TDAAEEFKALEKKLNHNLDRDLDYFSKDIKRMIANEIIKRYYFQRGGIIEQLKDDDDLQEAIKVLNDPAKYKEMLSAPIT
KAEKK
>Mature_565_residues
MKKLLNRRIALVLVAVIATVAFFSFKSGDDRNFQIAKNLDTFNAIVKELDMFYVDTIDPNKTIREGIDNMLFSLDPYTEY
YPEEDQSELEQMVKGSFGGIGSLITYNTKLKRSMIAEPFEGTPAAKAGLKAGDILMEIDGKDLLGKNNSEVSQMLRGQAG
TSFKLKVERPNEKGGQTPMEFTIVRESIQTPAIPYATVMDNKVGYISLSTFSGNPSKDFKKALLDLKKQGATSLVIDLRN
NGGGLLDEAVEIANYFLPRGKVIVTTKGKTKQASNTYKTLREPLDLDIPIAVLVNSGTASASEILSGSLQDLDRAVIVGN
RTFGKGLVQVPRSLPYGGMMKVTTSKYYIPSGRCVQAIDYKHRNEDGSVGTIPDSLTNVFYTAAGREVRDGGGVMPDITV
KQEKLPNILFYLVRDNLIFDYATQYCLKHPTVAAPEKFVVTDADYNDFKELVKKADFKYDQQSEKILKTLKEAAEFEGYM
TDAAEEFKALEKKLNHNLDRDLDYFSKDIKRMIANEIIKRYYFQRGGIIEQLKDDDDLQEAIKVLNDPAKYKEMLSAPIT
KAEKK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=314, Percent_Identity=32.1656050955414, Blast_Score=125, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 63088; Mature: 63088

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLNRRIALVLVAVIATVAFFSFKSGDDRNFQIAKNLDTFNAIVKELDMFYVDTIDPN
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHEEECCCCC
KTIREGIDNMLFSLDPYTEYYPEEDQSELEQMVKGSFGGIGSLITYNTKLKRSMIAEPFE
HHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCHHEEECHHHHHHHHCCCCC
GTPAAKAGLKAGDILMEIDGKDLLGKNNSEVSQMLRGQAGTSFKLKVERPNEKGGQTPME
CCCHHHCCCCCCCEEEEECCCHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHH
FTIVRESIQTPAIPYATVMDNKVGYISLSTFSGNPSKDFKKALLDLKKQGATSLVIDLRN
HHEEHHHHCCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEC
NGGGLLDEAVEIANYFLPRGKVIVTTKGKTKQASNTYKTLREPLDLDIPIAVLVNSGTAS
CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCH
ASEILSGSLQDLDRAVIVGNRTFGKGLVQVPRSLPYGGMMKVTTSKYYIPSGRCVQAIDY
HHHHHCCCHHHCCCEEEECCCCCCCHHHHHHCCCCCCCEEEEECCEEECCCCCEEEEHHH
KHRNEDGSVGTIPDSLTNVFYTAAGREVRDGGGVMPDITVKQEKLPNILFYLVRDNLIFD
HCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCEECHHHCCHHEEHHHHCCHHHH
YATQYCLKHPTVAAPEKFVVTDADYNDFKELVKKADFKYDQQSEKILKTLKEAAEFEGYM
HHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
TDAAEEFKALEKKLNHNLDRDLDYFSKDIKRMIANEIIKRYYFQRGGIIEQLKDDDDLQE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHH
AIKVLNDPAKYKEMLSAPITKAEKK
HHHHHCCHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MKKLLNRRIALVLVAVIATVAFFSFKSGDDRNFQIAKNLDTFNAIVKELDMFYVDTIDPN
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHEEECCCCC
KTIREGIDNMLFSLDPYTEYYPEEDQSELEQMVKGSFGGIGSLITYNTKLKRSMIAEPFE
HHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCHHEEECHHHHHHHHCCCCC
GTPAAKAGLKAGDILMEIDGKDLLGKNNSEVSQMLRGQAGTSFKLKVERPNEKGGQTPME
CCCHHHCCCCCCCEEEEECCCHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHH
FTIVRESIQTPAIPYATVMDNKVGYISLSTFSGNPSKDFKKALLDLKKQGATSLVIDLRN
HHEEHHHHCCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEC
NGGGLLDEAVEIANYFLPRGKVIVTTKGKTKQASNTYKTLREPLDLDIPIAVLVNSGTAS
CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCH
ASEILSGSLQDLDRAVIVGNRTFGKGLVQVPRSLPYGGMMKVTTSKYYIPSGRCVQAIDY
HHHHHCCCHHHCCCEEEECCCCCCCHHHHHHCCCCCCCEEEEECCEEECCCCCEEEEHHH
KHRNEDGSVGTIPDSLTNVFYTAAGREVRDGGGVMPDITVKQEKLPNILFYLVRDNLIFD
HCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCEECHHHCCHHEEHHHHCCHHHH
YATQYCLKHPTVAAPEKFVVTDADYNDFKELVKKADFKYDQQSEKILKTLKEAAEFEGYM
HHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
TDAAEEFKALEKKLNHNLDRDLDYFSKDIKRMIANEIIKRYYFQRGGIIEQLKDDDDLQE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHH
AIKVLNDPAKYKEMLSAPITKAEKK
HHHHHCCHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]