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The map label for this gene is tolC [H]

Identifier: 29348204

GI number: 29348204

Start: 3465961

End: 3467346

Strand: Reverse

Name: tolC [H]

Synonym: BT_2795

Alternate gene names: 29348204

Gene position: 3467346-3465961 (Counterclockwise)

Preceding gene: 29348205

Following gene: 29348203

Centisome position: 55.39

GC content: 42.21

Gene sequence:

>1386_bases
ATGGATAGTCCCATTTTGTCGCAACCCATTAAATTTGTGCCTGAATATAGAGCGATTATTATGAAAAGACTATTGTTCAT
TTTTACCTTTTTTTGCCTCCTTGCCATTCATGGAGGCGCACAGAATATTCTGACTCTGGAGAACTGCCTTCGTATAGGGA
TTGAGAACAATCTCTCTTTACAGGGAAAACGAAAAGCGATGCAGAAAAGTAAGTATGGCATTTCGGAGAATCGGGTGAAG
CTGTTGCCGCAAATCAATGGCTTTGCCAACTTTAATGATAATATCGATCCGCCTGTCTCAGTAACTGACGGTTCTTCCTA
TGGAGTACCTTATAATATTACCCGAACGTTGCAATATAGTGCCAATGCCGGGATAGAATTGCAGATGCCACTTTATAATC
AGACTCTCTATACTTCGATTTCCATAGCAGAGATTGTGGATGAGATGAGCCGGCTTTCGTATGAAAAGGCACGGGAAGAT
TTGATCTTGCAGATCAGTAAAATGTACTATCTGGGACAGGTTACTGCGGAACAGATTGCATTGATAAAAGCCAATATCAC
CCGATTGGAAGAACTGAGAGATATCACACAGGCTTTCTTTGATAATGGAATGGCAATGGAAGTTGACTTGAAGCGGGTGA
ATATCAATCTGGAAAATCTGAAAGTACAGTATGACAATGCGCAGGCGATGATGACGCAGCAGCTTAATATGCTGAAGTAC
ATCATGGATTATCCGGCAGAAAAAGAAATCGGCCTGTTGCCGGTCAATACGGATAGTATCGCTACGGTTGCTTTGACCGG
GTTGTCGGAAAACCTCTATGAGCTTCAGTTGCTTCAATCACAGGTGCAGCTGGCAGAGCGGCAGAAACGATTGATAAGTA
ATGGCTATATTCCTTCTCTCAATCTGACGGGAAACTGGAGGTTTGCCGCTTATACTGATGAGGCTTATCATTGGTTTCAT
TCCGGTCCGTCCAATCATTGGTTCCGTTCTTATGGGGTGGGACTGACTTTGCGTATTCCTATTTTTGATGGTTTGGATAA
GAAGTATAAGATCCGGAAAGCAATGATCGATATCGAAACCATGAAACTTTCACGGTTGGATACACGGAAGAATCTGCAAA
CACAGTATTTGAATGCTGTAAATGACTTGATGAATAACCAGCGGAACTTTAAAAAACAGAAAGACAATTATCTGCTTGCC
GAAGAAGTGTATACGGTTACTACCGACCGCTATCGGGAAGGAATCACTTCAATGACTGAAGTTCTGCAGGATGAAATGCG
GATGAGCGAGGCACAGAACAACTACATTAGTGCACATTATAATTATCGGGTGACCAACCTGATGTTACTGAAACTAACCG
GACAGATCTCATCCTTGTTCAAATAA

Upstream 100 bases:

>100_bases
ACAAAGGGCGAAGATTTGTCTATTAAATATAGTGATATTATAATAATTAAGGTGGATATCAGGACTGAAAAAGGAAAATA
TGAACATAAACAGTCGATAT

Downstream 100 bases:

>100_bases
CAGATAACTAATTGAATCATTCATATGGAAACAATGGACAATAATACAATCTCCAGTACGCATCAGGAGAAAGCTAAGAA
AATGAGAAAATTACGCCGCT

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MDSPILSQPIKFVPEYRAIIMKRLLFIFTFFCLLAIHGGAQNILTLENCLRIGIENNLSLQGKRKAMQKSKYGISENRVK
LLPQINGFANFNDNIDPPVSVTDGSSYGVPYNITRTLQYSANAGIELQMPLYNQTLYTSISIAEIVDEMSRLSYEKARED
LILQISKMYYLGQVTAEQIALIKANITRLEELRDITQAFFDNGMAMEVDLKRVNINLENLKVQYDNAQAMMTQQLNMLKY
IMDYPAEKEIGLLPVNTDSIATVALTGLSENLYELQLLQSQVQLAERQKRLISNGYIPSLNLTGNWRFAAYTDEAYHWFH
SGPSNHWFRSYGVGLTLRIPIFDGLDKKYKIRKAMIDIETMKLSRLDTRKNLQTQYLNAVNDLMNNQRNFKKQKDNYLLA
EEVYTVTTDRYREGITSMTEVLQDEMRMSEAQNNYISAHYNYRVTNLMLLKLTGQISSLFK

Sequences:

>Translated_461_residues
MDSPILSQPIKFVPEYRAIIMKRLLFIFTFFCLLAIHGGAQNILTLENCLRIGIENNLSLQGKRKAMQKSKYGISENRVK
LLPQINGFANFNDNIDPPVSVTDGSSYGVPYNITRTLQYSANAGIELQMPLYNQTLYTSISIAEIVDEMSRLSYEKARED
LILQISKMYYLGQVTAEQIALIKANITRLEELRDITQAFFDNGMAMEVDLKRVNINLENLKVQYDNAQAMMTQQLNMLKY
IMDYPAEKEIGLLPVNTDSIATVALTGLSENLYELQLLQSQVQLAERQKRLISNGYIPSLNLTGNWRFAAYTDEAYHWFH
SGPSNHWFRSYGVGLTLRIPIFDGLDKKYKIRKAMIDIETMKLSRLDTRKNLQTQYLNAVNDLMNNQRNFKKQKDNYLLA
EEVYTVTTDRYREGITSMTEVLQDEMRMSEAQNNYISAHYNYRVTNLMLLKLTGQISSLFK
>Mature_461_residues
MDSPILSQPIKFVPEYRAIIMKRLLFIFTFFCLLAIHGGAQNILTLENCLRIGIENNLSLQGKRKAMQKSKYGISENRVK
LLPQINGFANFNDNIDPPVSVTDGSSYGVPYNITRTLQYSANAGIELQMPLYNQTLYTSISIAEIVDEMSRLSYEKARED
LILQISKMYYLGQVTAEQIALIKANITRLEELRDITQAFFDNGMAMEVDLKRVNINLENLKVQYDNAQAMMTQQLNMLKY
IMDYPAEKEIGLLPVNTDSIATVALTGLSENLYELQLLQSQVQLAERQKRLISNGYIPSLNLTGNWRFAAYTDEAYHWFH
SGPSNHWFRSYGVGLTLRIPIFDGLDKKYKIRKAMIDIETMKLSRLDTRKNLQTQYLNAVNDLMNNQRNFKKQKDNYLLA
EEVYTVTTDRYREGITSMTEVLQDEMRMSEAQNNYISAHYNYRVTNLMLLKLTGQISSLFK

Specific function: May be specialized for signal sequence independent, extracellular secretion in Gram-negative bacteria [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 53118; Mature: 53118

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSPILSQPIKFVPEYRAIIMKRLLFIFTFFCLLAIHGGAQNILTLENCLRIGIENNLSL
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
QGKRKAMQKSKYGISENRVKLLPQINGFANFNDNIDPPVSVTDGSSYGVPYNITRTLQYS
CHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEC
ANAGIELQMPLYNQTLYTSISIAEIVDEMSRLSYEKAREDLILQISKMYYLGQVTAEQIA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LIKANITRLEELRDITQAFFDNGMAMEVDLKRVNINLENLKVQYDNAQAMMTQQLNMLKY
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEHEEEEECCHHHHHHHHHHHHHH
IMDYPAEKEIGLLPVNTDSIATVALTGLSENLYELQLLQSQVQLAERQKRLISNGYIPSL
HHCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
NLTGNWRFAAYTDEAYHWFHSGPSNHWFRSYGVGLTLRIPIFDGLDKKYKIRKAMIDIET
EECCCEEEEEEECHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
MKLSRLDTRKNLQTQYLNAVNDLMNNQRNFKKQKDNYLLAEEVYTVTTDRYREGITSMTE
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEHHHHEEEEHHHHHHHHHHHHH
VLQDEMRMSEAQNNYISAHYNYRVTNLMLLKLTGQISSLFK
HHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEHHHHHHHCC
>Mature Secondary Structure
MDSPILSQPIKFVPEYRAIIMKRLLFIFTFFCLLAIHGGAQNILTLENCLRIGIENNLSL
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
QGKRKAMQKSKYGISENRVKLLPQINGFANFNDNIDPPVSVTDGSSYGVPYNITRTLQYS
CHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEC
ANAGIELQMPLYNQTLYTSISIAEIVDEMSRLSYEKAREDLILQISKMYYLGQVTAEQIA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LIKANITRLEELRDITQAFFDNGMAMEVDLKRVNINLENLKVQYDNAQAMMTQQLNMLKY
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEHEEEEECCHHHHHHHHHHHHHH
IMDYPAEKEIGLLPVNTDSIATVALTGLSENLYELQLLQSQVQLAERQKRLISNGYIPSL
HHCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
NLTGNWRFAAYTDEAYHWFHSGPSNHWFRSYGVGLTLRIPIFDGLDKKYKIRKAMIDIET
EECCCEEEEEEECHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
MKLSRLDTRKNLQTQYLNAVNDLMNNQRNFKKQKDNYLLAEEVYTVTTDRYREGITSMTE
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEHHHHEEEEHHHHHHHHHHHHH
VLQDEMRMSEAQNNYISAHYNYRVTNLMLLKLTGQISSLFK
HHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]