| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29348176
Identifier: 29348176
GI number: 29348176
Start: 3426618
End: 3427235
Strand: Reverse
Name: 29348176
Synonym: BT_2767
Alternate gene names: NA
Gene position: 3427235-3426618 (Counterclockwise)
Preceding gene: 29348177
Following gene: 29348175
Centisome position: 54.75
GC content: 32.2
Gene sequence:
>618_bases ATGAAAATAGGAAATATCGCAGCCCGTCGAACAGTAATAATTATAATCTTTTTATTATGTTCGGTTGATCTGACTTTAGG AGGAGAATTGACTCCTAAACAGAATGTTTTTCAGAATGAATTGATTAATTTCTTGAAAGAAGAAGGATTCTTTTCCAATC AAAAGGATGGATCAAATGTCATTTATTTTAAAAAAGAAGGAGTGCTGCACTGGATTACTATTTCAGATGAGGAACCGTTT TTTATAACATTTAGTCGACGTGGATTTTCTTTAGTGGGACCAGATGCTTATAAAAAGGAATTAATGTTGGAAATTTGTAA TGAAATTAATGCAACTCATAAATGTGTAAAAATGTATTGTGAAGAAAATACTGCTGTTCTTCAAATAGAACAATATGTGT CTAGCATGAAGGAATATATGCAAGTATTTTATTCAAATCTAAAAGCTTTAGAATCAGCCAATGATGTTTTTGAGAAGCTT TATGATGATAAAAAGCCTGTGGTCATGTCAGTATCTCAGCCGGTTGTAAGTACGATACGAAAGAATTTTGATAGTGTGTT TTTTCCCGTTTTGGGTGTGTATTTGGGAAAAACAACGACGATTGAGTTGCGGAATTAA
Upstream 100 bases:
>100_bases TGTCTTTTTATGTTAGTTAGTGCTGGTAAGTAGTTTGCTTGTTTATAAAATGTAGAGAAATAATTTTATAAAATTTTGGT GTGTTTGAAATGAAATAATT
Downstream 100 bases:
>100_bases GGACAAAATCCAATAGATGAACAAGGGATTACATATAATATTGAAGGAGTAATCTTTAAGGATACTGATGGAGATGCTAT TATTGATTATATGTATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKIGNIAARRTVIIIIFLLCSVDLTLGGELTPKQNVFQNELINFLKEEGFFSNQKDGSNVIYFKKEGVLHWITISDEEPF FITFSRRGFSLVGPDAYKKELMLEICNEINATHKCVKMYCEENTAVLQIEQYVSSMKEYMQVFYSNLKALESANDVFEKL YDDKKPVVMSVSQPVVSTIRKNFDSVFFPVLGVYLGKTTTIELRN
Sequences:
>Translated_205_residues MKIGNIAARRTVIIIIFLLCSVDLTLGGELTPKQNVFQNELINFLKEEGFFSNQKDGSNVIYFKKEGVLHWITISDEEPF FITFSRRGFSLVGPDAYKKELMLEICNEINATHKCVKMYCEENTAVLQIEQYVSSMKEYMQVFYSNLKALESANDVFEKL YDDKKPVVMSVSQPVVSTIRKNFDSVFFPVLGVYLGKTTTIELRN >Mature_205_residues MKIGNIAARRTVIIIIFLLCSVDLTLGGELTPKQNVFQNELINFLKEEGFFSNQKDGSNVIYFKKEGVLHWITISDEEPF FITFSRRGFSLVGPDAYKKELMLEICNEINATHKCVKMYCEENTAVLQIEQYVSSMKEYMQVFYSNLKALESANDVFEKL YDDKKPVVMSVSQPVVSTIRKNFDSVFFPVLGVYLGKTTTIELRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23517; Mature: 23517
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGNIAARRTVIIIIFLLCSVDLTLGGELTPKQNVFQNELINFLKEEGFFSNQKDGSNV CCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE IYFKKEGVLHWITISDEEPFFITFSRRGFSLVGPDAYKKELMLEICNEINATHKCVKMYC EEEECCCEEEEEEECCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHCHHHHHHHHHH EENTAVLQIEQYVSSMKEYMQVFYSNLKALESANDVFEKLYDDKKPVVMSVSQPVVSTIR CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHH KNFDSVFFPVLGVYLGKTTTIELRN HHHHHHHHHHHHHHHCCCEEEEECC >Mature Secondary Structure MKIGNIAARRTVIIIIFLLCSVDLTLGGELTPKQNVFQNELINFLKEEGFFSNQKDGSNV CCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE IYFKKEGVLHWITISDEEPFFITFSRRGFSLVGPDAYKKELMLEICNEINATHKCVKMYC EEEECCCEEEEEEECCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHCHHHHHHHHHH EENTAVLQIEQYVSSMKEYMQVFYSNLKALESANDVFEKLYDDKKPVVMSVSQPVVSTIR CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHH KNFDSVFFPVLGVYLGKTTTIELRN HHHHHHHHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA