| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348177
Identifier: 29348177
GI number: 29348177
Start: 3427358
End: 3428308
Strand: Reverse
Name: 29348177
Synonym: BT_2768
Alternate gene names: NA
Gene position: 3428308-3427358 (Counterclockwise)
Preceding gene: 29348178
Following gene: 29348176
Centisome position: 54.76
GC content: 34.07
Gene sequence:
>951_bases ATGAAAAAGATAATATTGTTGCTCGTTGCTTTATTAAGCTTAAGCATGGATTCTTTAGCACAGGAGTTTACTGAAATTCA AAAGAAGTTGCGCTCAGACATTATGCTATTTTTGAAGGAAGAAGGGTATATGCCGGAATTGAATACTAACGGTAATATTC AATTCAAAAAAGAAGGTGACAAGTATTTCATATCGATTGATAAAAGGGATACTTCTCCCATGTATTTAACTGTGGGGTTA TCTTATATTTATAATGACACATATTCTGTCGATAAAGTGTCCAAAGCATTGAAAGAACTAAATGCATATAAAGCTGTAAA GGTGGTTTGTTTTGAAGATAGCTATGCCTACCATGCTGAAATGTATTTGGTTAATGCAGAACATTTCAAATACACTTTTT ATAAATTAATGGATCAGCTCAGTACGCTTAAAAAGGAATTGGCGGATTATTGTTCTTCTTCATCAGGAGTAGTGCGAAGT TCGTCCGGCACGTCGGAATCGCTTTTACCTATATATGGGATTGATTTTAATACAACTGAATCGGCTGTGAAAGCAATGAA TTATACAGAAAAGAAAAAAGAGGACGATGGCAGTTGTCGGTATGTAATTAATTCATGTTGGGTATATACTAAAGATGGGA AGGTTCGAAAAATAATAATAGGTAGCTATCATCAACTGCCACCTAATTTTCAGCAGTTAGGATTTGATAGAAGTAGATCA TACAATCAGTGGGTTGAATTTCTTAAAAGTATAGGATTTCAAATTGTGCAACAATACGATGCTCCTACAATAGAAAAGGG AAAAGGAACCTATAAGAATTATTTTAAAGCGGATTTTCGAGCAAAGAATCCGGATAGTGATTATACTGTTTATTTTAATT TTAGCGGATTTGATGTTCCTAATGCGGACACACCAATGACTAGGCCTTTTATGTCAATTGAACCGATATGA
Upstream 100 bases:
>100_bases GTGGTCATAACGGGAATACTGTTTGATAGTAAGGGAAGGCAATTGCGTTCTATAAGGAAGTAATTTGTTTTTATAATAAC TTGTGTAATTTTTAATATGT
Downstream 100 bases:
>100_bases TAATAACTTTGATGATCATGATTGTCTTTTTATGTTAGTTAGTGCTGGTAAGTAGTTTGCTTGTTTATAAAATGTAGAGA AATAATTTTATAAAATTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKKIILLLVALLSLSMDSLAQEFTEIQKKLRSDIMLFLKEEGYMPELNTNGNIQFKKEGDKYFISIDKRDTSPMYLTVGL SYIYNDTYSVDKVSKALKELNAYKAVKVVCFEDSYAYHAEMYLVNAEHFKYTFYKLMDQLSTLKKELADYCSSSSGVVRS SSGTSESLLPIYGIDFNTTESAVKAMNYTEKKKEDDGSCRYVINSCWVYTKDGKVRKIIIGSYHQLPPNFQQLGFDRSRS YNQWVEFLKSIGFQIVQQYDAPTIEKGKGTYKNYFKADFRAKNPDSDYTVYFNFSGFDVPNADTPMTRPFMSIEPI
Sequences:
>Translated_316_residues MKKIILLLVALLSLSMDSLAQEFTEIQKKLRSDIMLFLKEEGYMPELNTNGNIQFKKEGDKYFISIDKRDTSPMYLTVGL SYIYNDTYSVDKVSKALKELNAYKAVKVVCFEDSYAYHAEMYLVNAEHFKYTFYKLMDQLSTLKKELADYCSSSSGVVRS SSGTSESLLPIYGIDFNTTESAVKAMNYTEKKKEDDGSCRYVINSCWVYTKDGKVRKIIIGSYHQLPPNFQQLGFDRSRS YNQWVEFLKSIGFQIVQQYDAPTIEKGKGTYKNYFKADFRAKNPDSDYTVYFNFSGFDVPNADTPMTRPFMSIEPI >Mature_316_residues MKKIILLLVALLSLSMDSLAQEFTEIQKKLRSDIMLFLKEEGYMPELNTNGNIQFKKEGDKYFISIDKRDTSPMYLTVGL SYIYNDTYSVDKVSKALKELNAYKAVKVVCFEDSYAYHAEMYLVNAEHFKYTFYKLMDQLSTLKKELADYCSSSSGVVRS SSGTSESLLPIYGIDFNTTESAVKAMNYTEKKKEDDGSCRYVINSCWVYTKDGKVRKIIIGSYHQLPPNFQQLGFDRSRS YNQWVEFLKSIGFQIVQQYDAPTIEKGKGTYKNYFKADFRAKNPDSDYTVYFNFSGFDVPNADTPMTRPFMSIEPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36418; Mature: 36418
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILLLVALLSLSMDSLAQEFTEIQKKLRSDIMLFLKEEGYMPELNTNGNIQFKKEGD CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEECCC KYFISIDKRDTSPMYLTVGLSYIYNDTYSVDKVSKALKELNAYKAVKVVCFEDSYAYHAE EEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCEEEEE MYLVNAEHFKYTFYKLMDQLSTLKKELADYCSSSSGVVRSSSGTSESLLPIYGIDFNTTE EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCHH SAVKAMNYTEKKKEDDGSCRYVINSCWVYTKDGKVRKIIIGSYHQLPPNFQQLGFDRSRS HHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCC YNQWVEFLKSIGFQIVQQYDAPTIEKGKGTYKNYFKADFRAKNPDSDYTVYFNFSGFDVP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCC NADTPMTRPFMSIEPI CCCCCCCCCCCCCCCC >Mature Secondary Structure MKKIILLLVALLSLSMDSLAQEFTEIQKKLRSDIMLFLKEEGYMPELNTNGNIQFKKEGD CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEECCC KYFISIDKRDTSPMYLTVGLSYIYNDTYSVDKVSKALKELNAYKAVKVVCFEDSYAYHAE EEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCEEEEE MYLVNAEHFKYTFYKLMDQLSTLKKELADYCSSSSGVVRSSSGTSESLLPIYGIDFNTTE EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCHH SAVKAMNYTEKKKEDDGSCRYVINSCWVYTKDGKVRKIIIGSYHQLPPNFQQLGFDRSRS HHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCC YNQWVEFLKSIGFQIVQQYDAPTIEKGKGTYKNYFKADFRAKNPDSDYTVYFNFSGFDVP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCC NADTPMTRPFMSIEPI CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA