Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348177

Identifier: 29348177

GI number: 29348177

Start: 3427358

End: 3428308

Strand: Reverse

Name: 29348177

Synonym: BT_2768

Alternate gene names: NA

Gene position: 3428308-3427358 (Counterclockwise)

Preceding gene: 29348178

Following gene: 29348176

Centisome position: 54.76

GC content: 34.07

Gene sequence:

>951_bases
ATGAAAAAGATAATATTGTTGCTCGTTGCTTTATTAAGCTTAAGCATGGATTCTTTAGCACAGGAGTTTACTGAAATTCA
AAAGAAGTTGCGCTCAGACATTATGCTATTTTTGAAGGAAGAAGGGTATATGCCGGAATTGAATACTAACGGTAATATTC
AATTCAAAAAAGAAGGTGACAAGTATTTCATATCGATTGATAAAAGGGATACTTCTCCCATGTATTTAACTGTGGGGTTA
TCTTATATTTATAATGACACATATTCTGTCGATAAAGTGTCCAAAGCATTGAAAGAACTAAATGCATATAAAGCTGTAAA
GGTGGTTTGTTTTGAAGATAGCTATGCCTACCATGCTGAAATGTATTTGGTTAATGCAGAACATTTCAAATACACTTTTT
ATAAATTAATGGATCAGCTCAGTACGCTTAAAAAGGAATTGGCGGATTATTGTTCTTCTTCATCAGGAGTAGTGCGAAGT
TCGTCCGGCACGTCGGAATCGCTTTTACCTATATATGGGATTGATTTTAATACAACTGAATCGGCTGTGAAAGCAATGAA
TTATACAGAAAAGAAAAAAGAGGACGATGGCAGTTGTCGGTATGTAATTAATTCATGTTGGGTATATACTAAAGATGGGA
AGGTTCGAAAAATAATAATAGGTAGCTATCATCAACTGCCACCTAATTTTCAGCAGTTAGGATTTGATAGAAGTAGATCA
TACAATCAGTGGGTTGAATTTCTTAAAAGTATAGGATTTCAAATTGTGCAACAATACGATGCTCCTACAATAGAAAAGGG
AAAAGGAACCTATAAGAATTATTTTAAAGCGGATTTTCGAGCAAAGAATCCGGATAGTGATTATACTGTTTATTTTAATT
TTAGCGGATTTGATGTTCCTAATGCGGACACACCAATGACTAGGCCTTTTATGTCAATTGAACCGATATGA

Upstream 100 bases:

>100_bases
GTGGTCATAACGGGAATACTGTTTGATAGTAAGGGAAGGCAATTGCGTTCTATAAGGAAGTAATTTGTTTTTATAATAAC
TTGTGTAATTTTTAATATGT

Downstream 100 bases:

>100_bases
TAATAACTTTGATGATCATGATTGTCTTTTTATGTTAGTTAGTGCTGGTAAGTAGTTTGCTTGTTTATAAAATGTAGAGA
AATAATTTTATAAAATTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKKIILLLVALLSLSMDSLAQEFTEIQKKLRSDIMLFLKEEGYMPELNTNGNIQFKKEGDKYFISIDKRDTSPMYLTVGL
SYIYNDTYSVDKVSKALKELNAYKAVKVVCFEDSYAYHAEMYLVNAEHFKYTFYKLMDQLSTLKKELADYCSSSSGVVRS
SSGTSESLLPIYGIDFNTTESAVKAMNYTEKKKEDDGSCRYVINSCWVYTKDGKVRKIIIGSYHQLPPNFQQLGFDRSRS
YNQWVEFLKSIGFQIVQQYDAPTIEKGKGTYKNYFKADFRAKNPDSDYTVYFNFSGFDVPNADTPMTRPFMSIEPI

Sequences:

>Translated_316_residues
MKKIILLLVALLSLSMDSLAQEFTEIQKKLRSDIMLFLKEEGYMPELNTNGNIQFKKEGDKYFISIDKRDTSPMYLTVGL
SYIYNDTYSVDKVSKALKELNAYKAVKVVCFEDSYAYHAEMYLVNAEHFKYTFYKLMDQLSTLKKELADYCSSSSGVVRS
SSGTSESLLPIYGIDFNTTESAVKAMNYTEKKKEDDGSCRYVINSCWVYTKDGKVRKIIIGSYHQLPPNFQQLGFDRSRS
YNQWVEFLKSIGFQIVQQYDAPTIEKGKGTYKNYFKADFRAKNPDSDYTVYFNFSGFDVPNADTPMTRPFMSIEPI
>Mature_316_residues
MKKIILLLVALLSLSMDSLAQEFTEIQKKLRSDIMLFLKEEGYMPELNTNGNIQFKKEGDKYFISIDKRDTSPMYLTVGL
SYIYNDTYSVDKVSKALKELNAYKAVKVVCFEDSYAYHAEMYLVNAEHFKYTFYKLMDQLSTLKKELADYCSSSSGVVRS
SSGTSESLLPIYGIDFNTTESAVKAMNYTEKKKEDDGSCRYVINSCWVYTKDGKVRKIIIGSYHQLPPNFQQLGFDRSRS
YNQWVEFLKSIGFQIVQQYDAPTIEKGKGTYKNYFKADFRAKNPDSDYTVYFNFSGFDVPNADTPMTRPFMSIEPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36418; Mature: 36418

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIILLLVALLSLSMDSLAQEFTEIQKKLRSDIMLFLKEEGYMPELNTNGNIQFKKEGD
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEECCC
KYFISIDKRDTSPMYLTVGLSYIYNDTYSVDKVSKALKELNAYKAVKVVCFEDSYAYHAE
EEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCEEEEE
MYLVNAEHFKYTFYKLMDQLSTLKKELADYCSSSSGVVRSSSGTSESLLPIYGIDFNTTE
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCHH
SAVKAMNYTEKKKEDDGSCRYVINSCWVYTKDGKVRKIIIGSYHQLPPNFQQLGFDRSRS
HHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCC
YNQWVEFLKSIGFQIVQQYDAPTIEKGKGTYKNYFKADFRAKNPDSDYTVYFNFSGFDVP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCC
NADTPMTRPFMSIEPI
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIILLLVALLSLSMDSLAQEFTEIQKKLRSDIMLFLKEEGYMPELNTNGNIQFKKEGD
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEECCC
KYFISIDKRDTSPMYLTVGLSYIYNDTYSVDKVSKALKELNAYKAVKVVCFEDSYAYHAE
EEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCEEEEE
MYLVNAEHFKYTFYKLMDQLSTLKKELADYCSSSSGVVRSSSGTSESLLPIYGIDFNTTE
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCHH
SAVKAMNYTEKKKEDDGSCRYVINSCWVYTKDGKVRKIIIGSYHQLPPNFQQLGFDRSRS
HHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCC
YNQWVEFLKSIGFQIVQQYDAPTIEKGKGTYKNYFKADFRAKNPDSDYTVYFNFSGFDVP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCC
NADTPMTRPFMSIEPI
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA