| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348170
Identifier: 29348170
GI number: 29348170
Start: 3421513
End: 3422151
Strand: Reverse
Name: 29348170
Synonym: BT_2761
Alternate gene names: NA
Gene position: 3422151-3421513 (Counterclockwise)
Preceding gene: 29348171
Following gene: 29348169
Centisome position: 54.66
GC content: 42.72
Gene sequence:
>639_bases ATGAAAGACTGGTTTATGAATCTTCTGTATTACCTAAAAAGACCTTTTATCCGGCTCTCCCGTTTCCGCTACCGTTGTGG ATATGGTGTGCACTCTCCTTTTGCTTTCAGTCTGATCACAGATGTGATTTATGAGAAGATGCCTTATTATGCATACGACC TGCTGAAGGTGGAACAGAAAAAGCGGATCACAACACAGAGATGGGAGAAAGGAATACCAAGAATCAACCGTCTGTTGTTC CGCCTGGTGAATAAAGTGCAACCGGCCACTATCATAGAAGTAGGCCAGCCCTCGGCAGCCTCTTTATATTTACAGTCAGC CAAACCTTCTGCCGGGTATCTTTTTGCTTCTGACTTATCAGAGCTCTTTCTGGATGCCGATACTCCGGTAGACTTTCTGT ATCTGAATGACTATCGGAATCCGGCTTTGCTGGAAGAAGTTTTTAACATCTGTTCCCGTCGGACTACTCCGAATAGTTTG TTTGTCGTTCATGGGATCTGCTATTCAAAGGCAATGAAAAATCTTTGGAAACAGTTACAGAATGATGAGCGGGTGGGAAT CACTTTTGACTTGTATGATGCAGGCTTGCTTTTTTTTGATACAACAAAGATTAAACAGCATTATATCGTCAACTTCTGA
Upstream 100 bases:
>100_bases CAGTAGTTACTTGAAATAAATGATTAAAAGGGTCGGTCCATCGCGGGAGCCGGCCCTTTTTTCAATAAAATAATATATCT TTGCGTCACGAACAAAAAAA
Downstream 100 bases:
>100_bases TCACCTTTATACGTTAATCTTATATATAGTAATGATGAAAAATAGACGTTTATGAAAAAAAGCCTTGTATATACAAAGAC CGGTGACAAAGGAACTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MKDWFMNLLYYLKRPFIRLSRFRYRCGYGVHSPFAFSLITDVIYEKMPYYAYDLLKVEQKKRITTQRWEKGIPRINRLLF RLVNKVQPATIIEVGQPSAASLYLQSAKPSAGYLFASDLSELFLDADTPVDFLYLNDYRNPALLEEVFNICSRRTTPNSL FVVHGICYSKAMKNLWKQLQNDERVGITFDLYDAGLLFFDTTKIKQHYIVNF
Sequences:
>Translated_212_residues MKDWFMNLLYYLKRPFIRLSRFRYRCGYGVHSPFAFSLITDVIYEKMPYYAYDLLKVEQKKRITTQRWEKGIPRINRLLF RLVNKVQPATIIEVGQPSAASLYLQSAKPSAGYLFASDLSELFLDADTPVDFLYLNDYRNPALLEEVFNICSRRTTPNSL FVVHGICYSKAMKNLWKQLQNDERVGITFDLYDAGLLFFDTTKIKQHYIVNF >Mature_212_residues MKDWFMNLLYYLKRPFIRLSRFRYRCGYGVHSPFAFSLITDVIYEKMPYYAYDLLKVEQKKRITTQRWEKGIPRINRLLF RLVNKVQPATIIEVGQPSAASLYLQSAKPSAGYLFASDLSELFLDADTPVDFLYLNDYRNPALLEEVFNICSRRTTPNSL FVVHGICYSKAMKNLWKQLQNDERVGITFDLYDAGLLFFDTTKIKQHYIVNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24978; Mature: 24978
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDWFMNLLYYLKRPFIRLSRFRYRCGYGVHSPFAFSLITDVIYEKMPYYAYDLLKVEQK CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH KRITTQRWEKGIPRINRLLFRLVNKVQPATIIEVGQPSAASLYLQSAKPSAGYLFASDLS HHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHEEEECCCCCCCEEHHHHHH ELFLDADTPVDFLYLNDYRNPALLEEVFNICSRRTTPNSLFVVHGICYSKAMKNLWKQLQ HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHC NDERVGITFDLYDAGLLFFDTTKIKQHYIVNF CCCCCEEEEEEECCCEEEEEHHHHHCEEEECC >Mature Secondary Structure MKDWFMNLLYYLKRPFIRLSRFRYRCGYGVHSPFAFSLITDVIYEKMPYYAYDLLKVEQK CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH KRITTQRWEKGIPRINRLLFRLVNKVQPATIIEVGQPSAASLYLQSAKPSAGYLFASDLS HHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHEEEECCCCCCCEEHHHHHH ELFLDADTPVDFLYLNDYRNPALLEEVFNICSRRTTPNSLFVVHGICYSKAMKNLWKQLQ HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHC NDERVGITFDLYDAGLLFFDTTKIKQHYIVNF CCCCCEEEEEEECCCEEEEEHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA