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The map label for this gene is 29348171

Identifier: 29348171

GI number: 29348171

Start: 3422246

End: 3422929

Strand: Reverse

Name: 29348171

Synonym: BT_2762

Alternate gene names: NA

Gene position: 3422929-3422246 (Counterclockwise)

Preceding gene: 29348172

Following gene: 29348170

Centisome position: 54.68

GC content: 42.84

Gene sequence:

>684_bases
ATGGAAGCCAAAAAATCAAAAAAGGCTGCAATTGAGAATCAAAGAGGTTCTTGGTTGTTGATGGGTTTGGTTGTTGCGCT
TGCTTTCATGTTCGTATCGTTCGAATGGACACAGCATGATGTAAGAGTTGCGGCAGTATCATCTGATGATGAATCCATCT
TTGTAACGGAGCTCGTTCCAATCACATTCCCTGAAGAGAAACTGGAACCGCCTCCTCCACCGGAAACTAAAGTAACAGAA
TTGTTCGAAATAGTAGATGATACCGAAGAGGTGACGGATAACGTTTCAGTAGTACCAGACAATGTGAATGAACCTTACAA
GGTTGTTTGGGTACCGCCAGTAGTGGAAACTAAAGAAGTTGAGGAAGATGTTATTCACGTAAGTGTAGAAGTCATGCCCG
AATTTCCCGGTGGTTCAGCTGAATTGCTGAAATATTTGAGTACTCATATCAAATATCCGACAATGTCTCAGGAGATGGGC
TCACAAGGACGTGTAATTGTTCAGTTTGTCGTAGACAAAGACGGATCGATTACTAATCCGACAGTTGTACGAGGGGTAGA
TGCTTACCTGGATAAAGAAGCTATCCGTGTGATAAGTGGAATGCCAAAGTGGAAGCCCGGAGTGCAGAACGGTAAGAAAG
TTCGAGTAAAATATACTGTACCTGTAGTATTCAGACTGCAGTAG

Upstream 100 bases:

>100_bases
TTGCAGCTAGAGAGCACTTTAAGTAATGCTTAAGACAGAAAACGAAAAGTAGTATATATGCTATATATTTTCTATTATTA
ATTACTTAAACACATTTTTT

Downstream 100 bases:

>100_bases
TTACTTGAAATAAATGATTAAAAGGGTCGGTCCATCGCGGGAGCCGGCCCTTTTTTCAATAAAATAATATATCTTTGCGT
CACGAACAAAAAAAATGAAA

Product: TonB

Products: NA

Alternate protein names: NB Protein; Conserved Transporter; Outer Membrane Protein nB; Nb Family Protein; NB-Dependent Receptor; Outer Membrane Transport Energization Protein nb; Protein nB; Cytochrome C Biogenesis; Outer Membrane Protein; Peptidase; NB Family Outer Membrane Receptor Protein; NB-Related Protein; LOW QUALITY PROTEIN Outer Membrane Protein

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MEAKKSKKAAIENQRGSWLLMGLVVALAFMFVSFEWTQHDVRVAAVSSDDESIFVTELVPITFPEEKLEPPPPPETKVTE
LFEIVDDTEEVTDNVSVVPDNVNEPYKVVWVPPVVETKEVEEDVIHVSVEVMPEFPGGSAELLKYLSTHIKYPTMSQEMG
SQGRVIVQFVVDKDGSITNPTVVRGVDAYLDKEAIRVISGMPKWKPGVQNGKKVRVKYTVPVVFRLQ

Sequences:

>Translated_227_residues
MEAKKSKKAAIENQRGSWLLMGLVVALAFMFVSFEWTQHDVRVAAVSSDDESIFVTELVPITFPEEKLEPPPPPETKVTE
LFEIVDDTEEVTDNVSVVPDNVNEPYKVVWVPPVVETKEVEEDVIHVSVEVMPEFPGGSAELLKYLSTHIKYPTMSQEMG
SQGRVIVQFVVDKDGSITNPTVVRGVDAYLDKEAIRVISGMPKWKPGVQNGKKVRVKYTVPVVFRLQ
>Mature_227_residues
MEAKKSKKAAIENQRGSWLLMGLVVALAFMFVSFEWTQHDVRVAAVSSDDESIFVTELVPITFPEEKLEPPPPPETKVTE
LFEIVDDTEEVTDNVSVVPDNVNEPYKVVWVPPVVETKEVEEDVIHVSVEVMPEFPGGSAELLKYLSTHIKYPTMSQEMG
SQGRVIVQFVVDKDGSITNPTVVRGVDAYLDKEAIRVISGMPKWKPGVQNGKKVRVKYTVPVVFRLQ

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25413; Mature: 25413

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKKSKKAAIENQRGSWLLMGLVVALAFMFVSFEWTQHDVRVAAVSSDDESIFVTELVP
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCEECCCCEEEEEECCCCCEEEEEEEEE
ITFPEEKLEPPPPPETKVTELFEIVDDTEEVTDNVSVVPDNVNEPYKVVWVPPVVETKEV
EECCHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCCEECCCCCCCCEEEEEECCCCCCHHH
EEDVIHVSVEVMPEFPGGSAELLKYLSTHIKYPTMSQEMGSQGRVIVQFVVDKDGSITNP
HHCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEEECCCCCCCCC
TVVRGVDAYLDKEAIRVISGMPKWKPGVQNGKKVRVKYTVPVVFRLQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEC
>Mature Secondary Structure
MEAKKSKKAAIENQRGSWLLMGLVVALAFMFVSFEWTQHDVRVAAVSSDDESIFVTELVP
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCEECCCCEEEEEECCCCCEEEEEEEEE
ITFPEEKLEPPPPPETKVTELFEIVDDTEEVTDNVSVVPDNVNEPYKVVWVPPVVETKEV
EECCHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCCEECCCCCCCCEEEEEECCCCCCHHH
EEDVIHVSVEVMPEFPGGSAELLKYLSTHIKYPTMSQEMGSQGRVIVQFVVDKDGSITNP
HHCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEEECCCCCCCCC
TVVRGVDAYLDKEAIRVISGMPKWKPGVQNGKKVRVKYTVPVVFRLQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA