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The map label for this gene is secY [H]

Identifier: 29348116

GI number: 29348116

Start: 3368070

End: 3369413

Strand: Reverse

Name: secY [H]

Synonym: BT_2707

Alternate gene names: 29348116

Gene position: 3369413-3368070 (Counterclockwise)

Preceding gene: 29348117

Following gene: 29348115

Centisome position: 53.82

GC content: 37.65

Gene sequence:

>1344_bases
ATGAGAAAAGCTATTGAAACATTAAAGAATATATGGAAGATTGAGGATCTGAGACAGCGGATCCTCATCACCATATTGTT
TGTGGCAATTTACCGTTTCGGATCATATGTCGTATTACCGGGTATTAATCCGGCAATGCTGGCAAAATTGCACGAACAAA
CAAGTGAAGGCCTTTTAGCCTTGTTAAATATGTTCTCTGGAGGAGCATTTTCTAATGCCTCTATTTTTGCATTAGGAATC
ATGCCTTATATCTCTGCATCTATCGTTATTCAGCTATTGGGAATCGCTGTGCCGTATTTCCAGAAGTTGCAGCGCGAAGG
TGAGAGCGGCAGAAGAAAAATGAATCAATATACTCGTTATCTGACGATTGCTATATTGTTAGTTCAGGCCCCTTCTTATT
TGCTCAATCTTAAAATGCAGGCTGGCCCTTCCTTAAATGCTTCATTAGATTGGACTCTGTTTATGGTTACCTCTACCATT
ATTTTGGCAGCAGGTAGTATGTTTATTTTGTGGCTTGGTGAAAGAATAACTGATAAAGGTATTGGTAACGGTATTTCATT
TATCATCCTGATCGGTATTATCGCTCGTTTCCCTGATGCTTTGATACAAGAAGTTGTATCCAGAGTAGCAAATAAGAGTG
GTGGTCTGATTATGTTTATAATTGAAGTCGTATTCTTATTGTTAGTAATTGGTGCTGCAATCTTGTTGGTACAAGGTACA
AGAAAGATTCCTGTACAATATGCTAAAAGAATTGTAGGTAATAAACAATATGGTGGTGCAAGACAGTATATTCCTTTGAA
GGTGAATGCTGCTGGTGTAATGCCTATAATCTTTGCTCAGGCAATCATGTTTATTCCAATTACATTTATCGGTTTTTCCA
ATAATGTAAATAACGCAGGTGGTTTCTTGCATGCGTTTACAGATCATACAAGTTTCTGGTATAATTTTGTTTTTGCGGTA
ATGATTATATTATTTACATATTTCTATACTGCAATTACAATCAATCCGACTCAGATGGCTGAGGATATGAAGAGAAATAA
TGGTTTCATCCCTGGTATCAAACCGGGAAAGAAAACAGCAGAGTATATTGATGATATCATGTCTCGTATTACTTTACCGG
GTTCTTTCTTCTTGGCATTGGTTGCTATTATGCCTGCTTTTGCTGGTATATTTGGGGTTCAAGCTGGATTTGCTCAATTC
TTCGGCGGTACATCTTTGTTAATTCTTGTAGGTGTTGTTCTTGATACACTGCAACAGGTTGAAAGTCATTTGTTGATGAG
ACATTATGATGGTCTGTTGAAATCAGGTCGTATTAAGGGACGCGCTGGTGTAGCGGCATATTAA

Upstream 100 bases:

>100_bases
GCTCTGACTAACAAGCTGGAAGTAGAAGCTAACGCATTCTCTAAGAGTGCTGCTGCTGCTATTGAAGCTGCTGGTGGAAC
TGTAGTAAAACTCTGATTCA

Downstream 100 bases:

>100_bases
TTCTTTAGAATAGAAATGATATTTCTTAAGACAGAAGATGAAATAGAATTGCTCCGTCAGAGTAACCTGCTTGTCGGTAG
AACTCTAGCTGAGGTTGCTA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MRKAIETLKNIWKIEDLRQRILITILFVAIYRFGSYVVLPGINPAMLAKLHEQTSEGLLALLNMFSGGAFSNASIFALGI
MPYISASIVIQLLGIAVPYFQKLQREGESGRRKMNQYTRYLTIAILLVQAPSYLLNLKMQAGPSLNASLDWTLFMVTSTI
ILAAGSMFILWLGERITDKGIGNGISFIILIGIIARFPDALIQEVVSRVANKSGGLIMFIIEVVFLLLVIGAAILLVQGT
RKIPVQYAKRIVGNKQYGGARQYIPLKVNAAGVMPIIFAQAIMFIPITFIGFSNNVNNAGGFLHAFTDHTSFWYNFVFAV
MIILFTYFYTAITINPTQMAEDMKRNNGFIPGIKPGKKTAEYIDDIMSRITLPGSFFLALVAIMPAFAGIFGVQAGFAQF
FGGTSLLILVGVVLDTLQQVESHLLMRHYDGLLKSGRIKGRAGVAAY

Sequences:

>Translated_447_residues
MRKAIETLKNIWKIEDLRQRILITILFVAIYRFGSYVVLPGINPAMLAKLHEQTSEGLLALLNMFSGGAFSNASIFALGI
MPYISASIVIQLLGIAVPYFQKLQREGESGRRKMNQYTRYLTIAILLVQAPSYLLNLKMQAGPSLNASLDWTLFMVTSTI
ILAAGSMFILWLGERITDKGIGNGISFIILIGIIARFPDALIQEVVSRVANKSGGLIMFIIEVVFLLLVIGAAILLVQGT
RKIPVQYAKRIVGNKQYGGARQYIPLKVNAAGVMPIIFAQAIMFIPITFIGFSNNVNNAGGFLHAFTDHTSFWYNFVFAV
MIILFTYFYTAITINPTQMAEDMKRNNGFIPGIKPGKKTAEYIDDIMSRITLPGSFFLALVAIMPAFAGIFGVQAGFAQF
FGGTSLLILVGVVLDTLQQVESHLLMRHYDGLLKSGRIKGRAGVAAY
>Mature_447_residues
MRKAIETLKNIWKIEDLRQRILITILFVAIYRFGSYVVLPGINPAMLAKLHEQTSEGLLALLNMFSGGAFSNASIFALGI
MPYISASIVIQLLGIAVPYFQKLQREGESGRRKMNQYTRYLTIAILLVQAPSYLLNLKMQAGPSLNASLDWTLFMVTSTI
ILAAGSMFILWLGERITDKGIGNGISFIILIGIIARFPDALIQEVVSRVANKSGGLIMFIIEVVFLLLVIGAAILLVQGT
RKIPVQYAKRIVGNKQYGGARQYIPLKVNAAGVMPIIFAQAIMFIPITFIGFSNNVNNAGGFLHAFTDHTSFWYNFVFAV
MIILFTYFYTAITINPTQMAEDMKRNNGFIPGIKPGKKTAEYIDDIMSRITLPGSFFLALVAIMPAFAGIFGVQAGFAQF
FGGTSLLILVGVVLDTLQQVESHLLMRHYDGLLKSGRIKGRAGVAAY

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=430, Percent_Identity=39.5348837209302, Blast_Score=280, Evalue=1e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49220; Mature: 49220

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS00755 SECY_1 ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKAIETLKNIWKIEDLRQRILITILFVAIYRFGSYVVLPGINPAMLAKLHEQTSEGLLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
LLNMFSGGAFSNASIFALGIMPYISASIVIQLLGIAVPYFQKLQREGESGRRKMNQYTRY
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LTIAILLVQAPSYLLNLKMQAGPSLNASLDWTLFMVTSTIILAAGSMFILWLGERITDKG
HHHHHHHHHCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHEEEHHHHHHCCC
IGNGISFIILIGIIARFPDALIQEVVSRVANKSGGLIMFIIEVVFLLLVIGAAILLVQGT
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
RKIPVQYAKRIVGNKQYGGARQYIPLKVNAAGVMPIIFAQAIMFIPITFIGFSNNVNNAG
CCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCC
GFLHAFTDHTSFWYNFVFAVMIILFTYFYTAITINPTQMAEDMKRNNGFIPGIKPGKKTA
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHH
EYIDDIMSRITLPGSFFLALVAIMPAFAGIFGVQAGFAQFFGGTSLLILVGVVLDTLQQV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ESHLLMRHYDGLLKSGRIKGRAGVAAY
HHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRKAIETLKNIWKIEDLRQRILITILFVAIYRFGSYVVLPGINPAMLAKLHEQTSEGLLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
LLNMFSGGAFSNASIFALGIMPYISASIVIQLLGIAVPYFQKLQREGESGRRKMNQYTRY
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LTIAILLVQAPSYLLNLKMQAGPSLNASLDWTLFMVTSTIILAAGSMFILWLGERITDKG
HHHHHHHHHCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHEEEHHHHHHCCC
IGNGISFIILIGIIARFPDALIQEVVSRVANKSGGLIMFIIEVVFLLLVIGAAILLVQGT
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
RKIPVQYAKRIVGNKQYGGARQYIPLKVNAAGVMPIIFAQAIMFIPITFIGFSNNVNNAG
CCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCC
GFLHAFTDHTSFWYNFVFAVMIILFTYFYTAITINPTQMAEDMKRNNGFIPGIKPGKKTA
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHH
EYIDDIMSRITLPGSFFLALVAIMPAFAGIFGVQAGFAQFFGGTSLLILVGVVLDTLQQV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ESHLLMRHYDGLLKSGRIKGRAGVAAY
HHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8112597; 12948626 [H]