| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348087
Identifier: 29348087
GI number: 29348087
Start: 3336270
End: 3336674
Strand: Reverse
Name: 29348087
Synonym: BT_2678
Alternate gene names: NA
Gene position: 3336674-3336270 (Counterclockwise)
Preceding gene: 29348088
Following gene: 29348085
Centisome position: 53.3
GC content: 45.93
Gene sequence:
>405_bases ATGTGTATTTATATACATCCGTGCCTCTTTTTGAGAAAACAAAGGGAGGTTACGGGTGTTGTACATATCGGCGTGGGCTT TCTGCGTTGTTCGTTCTCGGTGGTGGGCATTGCGAAGGCCTTGAACATGGAACGGACGAAGGTAAGATTCCCACGCTTTT TTATATATTCCTTTCATCTTACATTTATCCGTTTACCCGGTGGGAGTCAGGGGGACACTCATAGGAAGATTGGGCATGAT TCATGCGGGACAGCTTATCGAACGTACGCTTCACGAACAGGGACGCACAGTTACCTGGTTCGCCGGACAGTTATGCTGTA CACGTCCCAATATATACAAGATATTCAAGAAGGAAAATATCGACATCCATCTTCTTTGGCGCATTTCGTGCATACTCGAT CATGA
Upstream 100 bases:
>100_bases GTATATAGAGAAGACGTTTACAAGCGTTTGTCTTTCGTGTTTCAGAACTTCGCAAACTTTGACCACCGGAATGACGAATA GCAACTAAGACGTCCTCCTG
Downstream 100 bases:
>100_bases TTTCTTCCGCGATTTATCCGATAACATCCGTATCGGTACTTCTTCATGTGTATCCAAATAAGATACATTTCTGTATCCTA TCCGGAACTATGATTTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MCIYIHPCLFLRKQREVTGVVHIGVGFLRCSFSVVGIAKALNMERTKVRFPRFFIYSFHLTFIRLPGGSQGDTHRKIGHD SCGTAYRTYASRTGTHSYLVRRTVMLYTSQYIQDIQEGKYRHPSSLAHFVHTRS
Sequences:
>Translated_134_residues MCIYIHPCLFLRKQREVTGVVHIGVGFLRCSFSVVGIAKALNMERTKVRFPRFFIYSFHLTFIRLPGGSQGDTHRKIGHD SCGTAYRTYASRTGTHSYLVRRTVMLYTSQYIQDIQEGKYRHPSSLAHFVHTRS >Mature_134_residues MCIYIHPCLFLRKQREVTGVVHIGVGFLRCSFSVVGIAKALNMERTKVRFPRFFIYSFHLTFIRLPGGSQGDTHRKIGHD SCGTAYRTYASRTGTHSYLVRRTVMLYTSQYIQDIQEGKYRHPSSLAHFVHTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15473; Mature: 15473
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCIYIHPCLFLRKQREVTGVVHIGVGFLRCSFSVVGIAKALNMERTKVRFPRFFIYSFHL CEEEECHHHHHHHHCHHEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEEE TFIRLPGGSQGDTHRKIGHDSCGTAYRTYASRTGTHSYLVRRTVMLYTSQYIQDIQEGKY EEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC RHPSSLAHFVHTRS CCHHHHHHHHHCCC >Mature Secondary Structure MCIYIHPCLFLRKQREVTGVVHIGVGFLRCSFSVVGIAKALNMERTKVRFPRFFIYSFHL CEEEECHHHHHHHHCHHEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEEE TFIRLPGGSQGDTHRKIGHDSCGTAYRTYASRTGTHSYLVRRTVMLYTSQYIQDIQEGKY EEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC RHPSSLAHFVHTRS CCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA