Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348087

Identifier: 29348087

GI number: 29348087

Start: 3336270

End: 3336674

Strand: Reverse

Name: 29348087

Synonym: BT_2678

Alternate gene names: NA

Gene position: 3336674-3336270 (Counterclockwise)

Preceding gene: 29348088

Following gene: 29348085

Centisome position: 53.3

GC content: 45.93

Gene sequence:

>405_bases
ATGTGTATTTATATACATCCGTGCCTCTTTTTGAGAAAACAAAGGGAGGTTACGGGTGTTGTACATATCGGCGTGGGCTT
TCTGCGTTGTTCGTTCTCGGTGGTGGGCATTGCGAAGGCCTTGAACATGGAACGGACGAAGGTAAGATTCCCACGCTTTT
TTATATATTCCTTTCATCTTACATTTATCCGTTTACCCGGTGGGAGTCAGGGGGACACTCATAGGAAGATTGGGCATGAT
TCATGCGGGACAGCTTATCGAACGTACGCTTCACGAACAGGGACGCACAGTTACCTGGTTCGCCGGACAGTTATGCTGTA
CACGTCCCAATATATACAAGATATTCAAGAAGGAAAATATCGACATCCATCTTCTTTGGCGCATTTCGTGCATACTCGAT
CATGA

Upstream 100 bases:

>100_bases
GTATATAGAGAAGACGTTTACAAGCGTTTGTCTTTCGTGTTTCAGAACTTCGCAAACTTTGACCACCGGAATGACGAATA
GCAACTAAGACGTCCTCCTG

Downstream 100 bases:

>100_bases
TTTCTTCCGCGATTTATCCGATAACATCCGTATCGGTACTTCTTCATGTGTATCCAAATAAGATACATTTCTGTATCCTA
TCCGGAACTATGATTTCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MCIYIHPCLFLRKQREVTGVVHIGVGFLRCSFSVVGIAKALNMERTKVRFPRFFIYSFHLTFIRLPGGSQGDTHRKIGHD
SCGTAYRTYASRTGTHSYLVRRTVMLYTSQYIQDIQEGKYRHPSSLAHFVHTRS

Sequences:

>Translated_134_residues
MCIYIHPCLFLRKQREVTGVVHIGVGFLRCSFSVVGIAKALNMERTKVRFPRFFIYSFHLTFIRLPGGSQGDTHRKIGHD
SCGTAYRTYASRTGTHSYLVRRTVMLYTSQYIQDIQEGKYRHPSSLAHFVHTRS
>Mature_134_residues
MCIYIHPCLFLRKQREVTGVVHIGVGFLRCSFSVVGIAKALNMERTKVRFPRFFIYSFHLTFIRLPGGSQGDTHRKIGHD
SCGTAYRTYASRTGTHSYLVRRTVMLYTSQYIQDIQEGKYRHPSSLAHFVHTRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15473; Mature: 15473

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIYIHPCLFLRKQREVTGVVHIGVGFLRCSFSVVGIAKALNMERTKVRFPRFFIYSFHL
CEEEECHHHHHHHHCHHEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEEE
TFIRLPGGSQGDTHRKIGHDSCGTAYRTYASRTGTHSYLVRRTVMLYTSQYIQDIQEGKY
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RHPSSLAHFVHTRS
CCHHHHHHHHHCCC
>Mature Secondary Structure
MCIYIHPCLFLRKQREVTGVVHIGVGFLRCSFSVVGIAKALNMERTKVRFPRFFIYSFHL
CEEEECHHHHHHHHCHHEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEEE
TFIRLPGGSQGDTHRKIGHDSCGTAYRTYASRTGTHSYLVRRTVMLYTSQYIQDIQEGKY
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RHPSSLAHFVHTRS
CCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA