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The map label for this gene is yghZ [H]

Identifier: 29348088

GI number: 29348088

Start: 3336916

End: 3337923

Strand: Reverse

Name: yghZ [H]

Synonym: BT_2679

Alternate gene names: 29348088

Gene position: 3337923-3336916 (Counterclockwise)

Preceding gene: 29348089

Following gene: 29348087

Centisome position: 53.32

GC content: 47.32

Gene sequence:

>1008_bases
ATGGATTACCCATTGAATAATCAGCCGGCTACTGATCGCTACGATCGCATGCAATATAAATACTGTGGCAAGAGTGGCTT
GCAACTGCCTCTCATCTCTTTAGGATTGTGGCATAACTTCGGTAGTGTAGATAACTTTAGTGTAGCGACCGACATGATTA
AATATGCCTTCGACCATGGCATCACCCATTTCGATCTTGCTAATAACTATGGCCCTGTGCCGGGAAGTGCCGAAACTAAT
TTCGGACGGATTCTCAAAGAAAACTTCCAGGGATACCGGGATGAGATGATAATCTCCTCCAAAGCCGGACATGATATGTG
GGCAGGACCTTATGGCGGTAACAGTTCCCGCAAAAACCTGATGGCAAGCATCGATCAGAGTCTGCGCCGGACAGGGCTGG
AGTATTTTGATATCTTCTATAGTCATCGCTATGACGGAGTCACTCCGGTAGAAGAAACCATTCAAACGTTGATTGATATT
GTAAAGCAAGGAAAAGCTCTGTATATCGGAATCTCAAAATATCCTCCTCTGCAAGCGCGGATTGCTTATGAAATGATGGC
AAAAGCAGGCGTTCCTTGTCTTATCAGCCAGTATCGTTATAGTATGTTCGACCGTGCAGTTGAGGCTGAAAGCCTTCCTT
TGGCTGCCGAATACGGTTCCGGCTTTATCGCCTTTTCCCCTTTGGCGCAAGGATTACTGACGGATAAATATCTGAATGGC
ATCCCCGAAGGCTCACGCGCGGCACGTCCTTCCACTTTTCTGCAACGTTCGCAAGTGACGCCTGAAAAGGTGGAGGCTGC
CCGACAATTGAATGAAATCGCCCGTCACCGTGGACAGACGCTGGCAGAAATGGCTTTGGCATGGGTGCTGAGAGACGAAC
GGATGACATCGGTCATAGTAGGAGCGAGCTCAGTGAATCAGCTGGCAGACAATTTGCAGGCTTTAAACCAGTTGGAATTT
ACTGCTGAAGAATTAAACGGGATAGAACGAATTTTGTGTAAAGTCTGA

Upstream 100 bases:

>100_bases
GACGTTGTTCCTTGATTTCAACCTTTGAATTTAGCAATAAGATGGAACATTATTAAAATATTTTCTCTTTCTTTGCAATA
ACGAAAAAACATTGAACCTT

Downstream 100 bases:

>100_bases
TGGCTCTATTGGGATAATTGGACTGTCATTTGCTGAGAGTGATTAAAAGATTATTAATCATAATTGGCGCACCAAACTTA
TTTTTTTATACATTTGCAAC

Product: putative ion-channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MDYPLNNQPATDRYDRMQYKYCGKSGLQLPLISLGLWHNFGSVDNFSVATDMIKYAFDHGITHFDLANNYGPVPGSAETN
FGRILKENFQGYRDEMIISSKAGHDMWAGPYGGNSSRKNLMASIDQSLRRTGLEYFDIFYSHRYDGVTPVEETIQTLIDI
VKQGKALYIGISKYPPLQARIAYEMMAKAGVPCLISQYRYSMFDRAVEAESLPLAAEYGSGFIAFSPLAQGLLTDKYLNG
IPEGSRAARPSTFLQRSQVTPEKVEAARQLNEIARHRGQTLAEMALAWVLRDERMTSVIVGASSVNQLADNLQALNQLEF
TAEELNGIERILCKV

Sequences:

>Translated_335_residues
MDYPLNNQPATDRYDRMQYKYCGKSGLQLPLISLGLWHNFGSVDNFSVATDMIKYAFDHGITHFDLANNYGPVPGSAETN
FGRILKENFQGYRDEMIISSKAGHDMWAGPYGGNSSRKNLMASIDQSLRRTGLEYFDIFYSHRYDGVTPVEETIQTLIDI
VKQGKALYIGISKYPPLQARIAYEMMAKAGVPCLISQYRYSMFDRAVEAESLPLAAEYGSGFIAFSPLAQGLLTDKYLNG
IPEGSRAARPSTFLQRSQVTPEKVEAARQLNEIARHRGQTLAEMALAWVLRDERMTSVIVGASSVNQLADNLQALNQLEF
TAEELNGIERILCKV
>Mature_335_residues
MDYPLNNQPATDRYDRMQYKYCGKSGLQLPLISLGLWHNFGSVDNFSVATDMIKYAFDHGITHFDLANNYGPVPGSAETN
FGRILKENFQGYRDEMIISSKAGHDMWAGPYGGNSSRKNLMASIDQSLRRTGLEYFDIFYSHRYDGVTPVEETIQTLIDI
VKQGKALYIGISKYPPLQARIAYEMMAKAGVPCLISQYRYSMFDRAVEAESLPLAAEYGSGFIAFSPLAQGLLTDKYLNG
IPEGSRAARPSTFLQRSQVTPEKVEAARQLNEIARHRGQTLAEMALAWVLRDERMTSVIVGASSVNQLADNLQALNQLEF
TAEELNGIERILCKV

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI27436964, Length=335, Percent_Identity=33.134328358209, Blast_Score=174, Evalue=9e-44,
Organism=Homo sapiens, GI27436962, Length=335, Percent_Identity=33.4328358208955, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI27436966, Length=338, Percent_Identity=32.8402366863905, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI27436969, Length=328, Percent_Identity=33.8414634146341, Blast_Score=168, Evalue=5e-42,
Organism=Homo sapiens, GI4504825, Length=326, Percent_Identity=33.7423312883436, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI27436971, Length=333, Percent_Identity=33.033033033033, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI41152114, Length=229, Percent_Identity=31.8777292576419, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI223718702, Length=227, Percent_Identity=27.7533039647577, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI41327764, Length=227, Percent_Identity=29.0748898678414, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1789375, Length=323, Percent_Identity=54.7987616099071, Blast_Score=363, Evalue=1e-101,
Organism=Escherichia coli, GI87081735, Length=313, Percent_Identity=35.1437699680511, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1789199, Length=349, Percent_Identity=29.7994269340974, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788070, Length=315, Percent_Identity=28.2539682539683, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788081, Length=315, Percent_Identity=23.4920634920635, Blast_Score=75, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6322615, Length=251, Percent_Identity=26.2948207171315, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6323998, Length=311, Percent_Identity=24.4372990353698, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6325169, Length=335, Percent_Identity=25.3731343283582, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6319958, Length=303, Percent_Identity=25.0825082508251, Blast_Score=93, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6319951, Length=257, Percent_Identity=26.0700389105058, Blast_Score=83, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24640980, Length=342, Percent_Identity=26.0233918128655, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI45549126, Length=342, Percent_Identity=26.0233918128655, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24646155, Length=309, Percent_Identity=26.2135922330097, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR005399
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: NA

Molecular weight: Translated: 37469; Mature: 37469

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYPLNNQPATDRYDRMQYKYCGKSGLQLPLISLGLWHNFGSVDNFSVATDMIKYAFDHG
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
ITHFDLANNYGPVPGSAETNFGRILKENFQGYRDEMIISSKAGHDMWAGPYGGNSSRKNL
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHH
MASIDQSLRRTGLEYFDIFYSHRYDGVTPVEETIQTLIDIVKQGKALYIGISKYPPLQAR
HHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
IAYEMMAKAGVPCLISQYRYSMFDRAVEAESLPLAAEYGSGFIAFSPLAQGLLTDKYLNG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEHHHHHHHHHHHHHHCC
IPEGSRAARPSTFLQRSQVTPEKVEAARQLNEIARHRGQTLAEMALAWVLRDERMTSVIV
CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
GASSVNQLADNLQALNQLEFTAEELNGIERILCKV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDYPLNNQPATDRYDRMQYKYCGKSGLQLPLISLGLWHNFGSVDNFSVATDMIKYAFDHG
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
ITHFDLANNYGPVPGSAETNFGRILKENFQGYRDEMIISSKAGHDMWAGPYGGNSSRKNL
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHH
MASIDQSLRRTGLEYFDIFYSHRYDGVTPVEETIQTLIDIVKQGKALYIGISKYPPLQAR
HHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
IAYEMMAKAGVPCLISQYRYSMFDRAVEAESLPLAAEYGSGFIAFSPLAQGLLTDKYLNG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEHHHHHHHHHHHHHHCC
IPEGSRAARPSTFLQRSQVTPEKVEAARQLNEIARHRGQTLAEMALAWVLRDERMTSVIV
CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
GASSVNQLADNLQALNQLEFTAEELNGIERILCKV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]