| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348079
Identifier: 29348079
GI number: 29348079
Start: 3324451
End: 3324894
Strand: Reverse
Name: 29348079
Synonym: BT_2669
Alternate gene names: NA
Gene position: 3324894-3324451 (Counterclockwise)
Preceding gene: 29348084
Following gene: 29348078
Centisome position: 53.11
GC content: 35.14
Gene sequence:
>444_bases ATGAAAGGTTCTGTGAGATTCATATTAGCGATTGTTCTGCTGATGCTATCATATAGCATAGGTGGAAATGCTATGAATAT CACTTCATGTATTTCTCAGAGCGAATGCTCTTGTCAGTTGTCTGAATCAACTTCCGATACGAATTCTAATTCTTCATTTA AGACTCGTTCGCTGGGGTATGACAGATCATCCCAGTCTTTGTCTATTTCTGACGTAGAATTAGGCTTTAAATCAGTAACA GAAACATCTTCTAATAATTATCGTCTGCGTAGAATCATTGAATCCAATGATTTCTTTAAAGACGTTATGTATAAGTTCTT CTTGTTAAGAGAAAACTCACTTGTATTAGATCAAAGTAAATCCTATTATTCGGATAAGGATCCACATTACTCCATTATCT GTAGCGACTACTACGTGTTCGCTCTAAGACGTATCCTTATTTAA
Upstream 100 bases:
>100_bases TTATGCTTAAATGATGTGAATAACGACAAACGGATATATTTAATTGCTACATTTGTCACCGAAATACGAGAATTCGATAT AAACAACTAAAATAAATATC
Downstream 100 bases:
>100_bases TTACTTATCCCATCTTATTTACTTTTTCGTACCCTGTATGAAGCTGTGTGACTTTCATTCTTGAAAAGTCACAGGGTCTA TAGCGCAGTGTATCTAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKGSVRFILAIVLLMLSYSIGGNAMNITSCISQSECSCQLSESTSDTNSNSSFKTRSLGYDRSSQSLSISDVELGFKSVT ETSSNNYRLRRIIESNDFFKDVMYKFFLLRENSLVLDQSKSYYSDKDPHYSIICSDYYVFALRRILI
Sequences:
>Translated_147_residues MKGSVRFILAIVLLMLSYSIGGNAMNITSCISQSECSCQLSESTSDTNSNSSFKTRSLGYDRSSQSLSISDVELGFKSVT ETSSNNYRLRRIIESNDFFKDVMYKFFLLRENSLVLDQSKSYYSDKDPHYSIICSDYYVFALRRILI >Mature_147_residues MKGSVRFILAIVLLMLSYSIGGNAMNITSCISQSECSCQLSESTSDTNSNSSFKTRSLGYDRSSQSLSISDVELGFKSVT ETSSNNYRLRRIIESNDFFKDVMYKFFLLRENSLVLDQSKSYYSDKDPHYSIICSDYYVFALRRILI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16754; Mature: 16754
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGSVRFILAIVLLMLSYSIGGNAMNITSCISQSECSCQLSESTSDTNSNSSFKTRSLGY CCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCEEECCCCCCCCCCCCCEECCCCC DRSSQSLSISDVELGFKSVTETSSNNYRLRRIIESNDFFKDVMYKFFLLRENSLVLDQSK CCCCCCEEEHHHHHCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCC SYYSDKDPHYSIICSDYYVFALRRILI CCCCCCCCCEEEEECHHHHHHHHHHHC >Mature Secondary Structure MKGSVRFILAIVLLMLSYSIGGNAMNITSCISQSECSCQLSESTSDTNSNSSFKTRSLGY CCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCEEECCCCCCCCCCCCCEECCCCC DRSSQSLSISDVELGFKSVTETSSNNYRLRRIIESNDFFKDVMYKFFLLRENSLVLDQSK CCCCCCEEEHHHHHCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCC SYYSDKDPHYSIICSDYYVFALRRILI CCCCCCCCCEEEEECHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA