Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348079

Identifier: 29348079

GI number: 29348079

Start: 3324451

End: 3324894

Strand: Reverse

Name: 29348079

Synonym: BT_2669

Alternate gene names: NA

Gene position: 3324894-3324451 (Counterclockwise)

Preceding gene: 29348084

Following gene: 29348078

Centisome position: 53.11

GC content: 35.14

Gene sequence:

>444_bases
ATGAAAGGTTCTGTGAGATTCATATTAGCGATTGTTCTGCTGATGCTATCATATAGCATAGGTGGAAATGCTATGAATAT
CACTTCATGTATTTCTCAGAGCGAATGCTCTTGTCAGTTGTCTGAATCAACTTCCGATACGAATTCTAATTCTTCATTTA
AGACTCGTTCGCTGGGGTATGACAGATCATCCCAGTCTTTGTCTATTTCTGACGTAGAATTAGGCTTTAAATCAGTAACA
GAAACATCTTCTAATAATTATCGTCTGCGTAGAATCATTGAATCCAATGATTTCTTTAAAGACGTTATGTATAAGTTCTT
CTTGTTAAGAGAAAACTCACTTGTATTAGATCAAAGTAAATCCTATTATTCGGATAAGGATCCACATTACTCCATTATCT
GTAGCGACTACTACGTGTTCGCTCTAAGACGTATCCTTATTTAA

Upstream 100 bases:

>100_bases
TTATGCTTAAATGATGTGAATAACGACAAACGGATATATTTAATTGCTACATTTGTCACCGAAATACGAGAATTCGATAT
AAACAACTAAAATAAATATC

Downstream 100 bases:

>100_bases
TTACTTATCCCATCTTATTTACTTTTTCGTACCCTGTATGAAGCTGTGTGACTTTCATTCTTGAAAAGTCACAGGGTCTA
TAGCGCAGTGTATCTAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKGSVRFILAIVLLMLSYSIGGNAMNITSCISQSECSCQLSESTSDTNSNSSFKTRSLGYDRSSQSLSISDVELGFKSVT
ETSSNNYRLRRIIESNDFFKDVMYKFFLLRENSLVLDQSKSYYSDKDPHYSIICSDYYVFALRRILI

Sequences:

>Translated_147_residues
MKGSVRFILAIVLLMLSYSIGGNAMNITSCISQSECSCQLSESTSDTNSNSSFKTRSLGYDRSSQSLSISDVELGFKSVT
ETSSNNYRLRRIIESNDFFKDVMYKFFLLRENSLVLDQSKSYYSDKDPHYSIICSDYYVFALRRILI
>Mature_147_residues
MKGSVRFILAIVLLMLSYSIGGNAMNITSCISQSECSCQLSESTSDTNSNSSFKTRSLGYDRSSQSLSISDVELGFKSVT
ETSSNNYRLRRIIESNDFFKDVMYKFFLLRENSLVLDQSKSYYSDKDPHYSIICSDYYVFALRRILI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16754; Mature: 16754

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSVRFILAIVLLMLSYSIGGNAMNITSCISQSECSCQLSESTSDTNSNSSFKTRSLGY
CCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCEEECCCCCCCCCCCCCEECCCCC
DRSSQSLSISDVELGFKSVTETSSNNYRLRRIIESNDFFKDVMYKFFLLRENSLVLDQSK
CCCCCCEEEHHHHHCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCC
SYYSDKDPHYSIICSDYYVFALRRILI
CCCCCCCCCEEEEECHHHHHHHHHHHC
>Mature Secondary Structure
MKGSVRFILAIVLLMLSYSIGGNAMNITSCISQSECSCQLSESTSDTNSNSSFKTRSLGY
CCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCEEECCCCCCCCCCCCCEECCCCC
DRSSQSLSISDVELGFKSVTETSSNNYRLRRIIESNDFFKDVMYKFFLLRENSLVLDQSK
CCCCCCEEEHHHHHCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCC
SYYSDKDPHYSIICSDYYVFALRRILI
CCCCCCCCCEEEEECHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA